EWM29640.1, cds1040 (CDS) Nannochloropsis gaditana

Overview
NameEWM29640.1
Unique Namecds1040
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1028316..1031144 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29640.1
ProductT-complex 11
Orig transcript idgnl|cribi|Naga_100050g17.6863.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1028316..1031144 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR008862Tcp11
Homology
BLAST of EWM29640.1 vs. NCBI_GenBank
Match: gi|585112212|gb|EWM29640.1| (T-complex 11 [Nannochloropsis gaditana])

HSP 1 Score: 1909.81 bits (4946), Expect = 0.000e+0
Identity = 942/942 (100.00%), Postives = 942/942 (100.00%), Query Frame = 0
Query:    1 MMKTTAAPESTQCVAAAIVNVTSETSSKPSSETSLPPQPSLSSEAGIVATSKHMLRATPEERAVSYSCMQSSERIGGQVGSPASSGGLNLGKRRIAQSETSTFQSPRHLKHQVSSSSYLPQPRTARKNKSAQLLDFLRDGIKTQQHSCQALGMAREHAILVLQRWFRNLREHWRLVKQVQEATSQSLLPLLEAAEASRAGSWASEWEAMCRQGSLEFHACHMLQGLGFAREGQAADKSLTHPMTLLSALLISVHPEAIMTASPVRSKRRRREHERRGIALVQAASRVHETLLALYHCLHQAKMPRWVMLRAVVQVRKAFRLYVVQRVRYQGVSDAEAARLVRRVTHAAVGVFKAMHRSQQKSQVDAAQAIECAEAIIEGEARLRHLEAALQQLVGQRDTARRMDMARQVAEEGKQRDGKIHGRSELKPLASDQDETLMSMDSEPEGELHASGDTQTDTIFSNEWLVHEICVLPKSRFLQVSMEDASQPLTCGNKPSQGDTQAYWETVTQTLLMGDFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPSISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPVSSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQGRPVSVFSEDDLPETLAIDAQRLGLARHALWCVASAGTVVAYLGQALGRQLRAEERQVVVQELMVLLPEADVEVEDIGLHVGHIASTRLGMTGAGERKMMEERVRRLLQEGRCPVFQLLYQRAVDVVHAVLEREESTTEDESGRVAHLCQQQGLTGMESRILKICDVMLLVTRHNEACFLSLYQKLVSDALRSE 942
            MMKTTAAPESTQCVAAAIVNVTSETSSKPSSETSLPPQPSLSSEAGIVATSKHMLRATPEERAVSYSCMQSSERIGGQVGSPASSGGLNLGKRRIAQSETSTFQSPRHLKHQVSSSSYLPQPRTARKNKSAQLLDFLRDGIKTQQHSCQALGMAREHAILVLQRWFRNLREHWRLVKQVQEATSQSLLPLLEAAEASRAGSWASEWEAMCRQGSLEFHACHMLQGLGFAREGQAADKSLTHPMTLLSALLISVHPEAIMTASPVRSKRRRREHERRGIALVQAASRVHETLLALYHCLHQAKMPRWVMLRAVVQVRKAFRLYVVQRVRYQGVSDAEAARLVRRVTHAAVGVFKAMHRSQQKSQVDAAQAIECAEAIIEGEARLRHLEAALQQLVGQRDTARRMDMARQVAEEGKQRDGKIHGRSELKPLASDQDETLMSMDSEPEGELHASGDTQTDTIFSNEWLVHEICVLPKSRFLQVSMEDASQPLTCGNKPSQGDTQAYWETVTQTLLMGDFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPSISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPVSSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQGRPVSVFSEDDLPETLAIDAQRLGLARHALWCVASAGTVVAYLGQALGRQLRAEERQVVVQELMVLLPEADVEVEDIGLHVGHIASTRLGMTGAGERKMMEERVRRLLQEGRCPVFQLLYQRAVDVVHAVLEREESTTEDESGRVAHLCQQQGLTGMESRILKICDVMLLVTRHNEACFLSLYQKLVSDALRSE
Sbjct:    1 MMKTTAAPESTQCVAAAIVNVTSETSSKPSSETSLPPQPSLSSEAGIVATSKHMLRATPEERAVSYSCMQSSERIGGQVGSPASSGGLNLGKRRIAQSETSTFQSPRHLKHQVSSSSYLPQPRTARKNKSAQLLDFLRDGIKTQQHSCQALGMAREHAILVLQRWFRNLREHWRLVKQVQEATSQSLLPLLEAAEASRAGSWASEWEAMCRQGSLEFHACHMLQGLGFAREGQAADKSLTHPMTLLSALLISVHPEAIMTASPVRSKRRRREHERRGIALVQAASRVHETLLALYHCLHQAKMPRWVMLRAVVQVRKAFRLYVVQRVRYQGVSDAEAARLVRRVTHAAVGVFKAMHRSQQKSQVDAAQAIECAEAIIEGEARLRHLEAALQQLVGQRDTARRMDMARQVAEEGKQRDGKIHGRSELKPLASDQDETLMSMDSEPEGELHASGDTQTDTIFSNEWLVHEICVLPKSRFLQVSMEDASQPLTCGNKPSQGDTQAYWETVTQTLLMGDFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPSISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPVSSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQGRPVSVFSEDDLPETLAIDAQRLGLARHALWCVASAGTVVAYLGQALGRQLRAEERQVVVQELMVLLPEADVEVEDIGLHVGHIASTRLGMTGAGERKMMEERVRRLLQEGRCPVFQLLYQRAVDVVHAVLEREESTTEDESGRVAHLCQQQGLTGMESRILKICDVMLLVTRHNEACFLSLYQKLVSDALRSE 942          
BLAST of EWM29640.1 vs. NCBI_GenBank
Match: gi|299471356|emb|CBN79311.1| (t-complex 11 (mouse) like 2, isoform CRA_a (Partial), partial [Ectocarpus siliculosus])

HSP 1 Score: 142.895 bits (359), Expect = 4.415e-31
Identity = 89/239 (37.24%), Postives = 126/239 (52.72%), Query Frame = 0
Query:  459 IFSNEWLVHEICVLPKSRFLQVSMEDA--SQPLTCGNKP-----SQGDTQAYWETVTQTLLMGDFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPSISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWL 690
            + S EWLV  + +  ++  L VSME+A  +Q L  GN        +    AYW TV   +   D++PLL LV EL D++I +TP R DL  E   ++DV LL+Q++     D    F ++ F G R+L LEAP RN  T+  L      +D V    GG   R  L+ + V +         FE+L  K D+IHVDI N+H++  TP  + HG  +ER +F E+L  G TS+D    WL
Sbjct:  735 LLSKEWLVPGVMISGET--LTVSMEEAIENQLLRSGNPAVAAGGGEDGVNAYWSTVESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEV---EGG---RRRLEPAMVRE--------CFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGETSLDMTHLWL 957          
BLAST of EWM29640.1 vs. NCBI_GenBank
Match: gi|299471621|emb|CBN76843.1| (novel protein containing a T-complex protein 11 domain (zgc:73347) [Ectocarpus siliculosus])

HSP 1 Score: 117.087 bits (292), Expect = 5.263e-23
Identity = 116/448 (25.89%), Postives = 196/448 (43.75%), Query Frame = 0
Query:  515 DFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPSISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPVSSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQGRPVSVFSEDD--LPETLAIDAQRLGLARHALWCVASAGTVVAYLGQALGR-----------QLRAEERQVVVQELMVLLPEADVEVEDIGLHVGHIASTRLGMTGAGER-----KMMEERVRRLLQEGRCP---VFQLLYQRAVDVVHAVLEREESTTEDESGRVAHLCQQQGLTGMESRILKICDVMLLVTRHNEACFLSLYQKLVSDALRS 941
            DF PLL L+ E+ + L+S+TP+ + L  E+   L    L ++L    LD++ +  ++ F   RIL L+AP R+     WL       +  +  +G P               +P +  +FEF+  ++++I  D  N+HIR   P+   HG  +ER++FE RL++G  S++R  +WL   V      +     +       R A  +G+R    E  + +L+ A+  LL  + R  RP +  +     LPETLA D  RL  AR  +  V    T+   + Q L R            L+A+   ++ Q+  VLLP+   E       +   AS   G  GA E         EE +R LL     P   VF++ ++R +  +  ++           G  A +C + G+      +  +   +  +  HN   F   Y  +V++A ++
Sbjct:  488 DFGPLLALLGEVREELVSLTPNNSVLVGEVRAVLSQERLAEMLRDKTLDARQVQRLVGFIAGRILNLQAPVRSDGARAWLKGFDASMEAAIA-SGDPLA------------IIPLLPRVFEFVFAQMEEIKRDTANAHIRLVAPYLARHGAPYERAKFEARLSRGDVSLERTKAWLSSAVQGFLGGDAGEGGTGDEGERARRA--KGLRDGREELHKAVLQEAFTGLLRSTVRLDRPDAAAAAAGGVLPETLAGDGGRLAAARDDVDRVTLVATLCVLVRQVLARLRIGCPAPAMAALQAKTSGLLKQQ-GVLLPQIVEECVATSRRLASSASKEGG--GAAESPPGLPPAEEEGLRSLLMSSADPNNEVFRVFFKRVLLSLKGMV---------AGGDAADVCVRNGMQSFGEELRPVGARLHRLFAHNVKVFAGHYGPIVTEAAKA 908          
BLAST of EWM29640.1 vs. NCBI_GenBank
Match: gi|669163058|ref|XP_008617091.1| (hypothetical protein SDRG_12789 [Saprolegnia diclina VS20] >gi|530731297|gb|EQC29539.1| hypothetical protein SDRG_12789 [Saprolegnia diclina VS20])

HSP 1 Score: 107.071 bits (266), Expect = 5.783e-20
Identity = 117/494 (23.68%), Postives = 205/494 (41.50%), Query Frame = 0
Query:  456 TDTIFSNEWLVHEICVLPKSRFLQVSMEDASQPLTCGNKPSQGDTQAYWETVTQTL----LMGDFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPSISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPV--SSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQGRPVSVFSEDDLPETLAIDAQRLGLARHALWCVASAGTVVAYLGQALGRQLRA---EERQVVVQELMVLLPEADVEVEDIGLHVGHIASTRLGMTG-AGERKMMEERVRRLLQEGRCPVFQLLYQRAVDVVHAVLEREESTTEDESGRVAHLCQQQGLTGMESRILKICDVMLLVTRHNEACFLSLYQKLVSDAL 939
            T  +F+N+ L HE+ + P  +    S++DA  PLT     +Q   QA+W+ +  T     ++G F        +L D+L ++   +A     +  +L  A L+ + S    D     ++L+   R IL  EAPAR +ST  WL R +E           P    +         WV ++    +F   KVD+I +D  N+H++   P+   HG   E+ +F  +L QG T++     WL   +A+A       P    +L  GD+R             A R+L++ A+  L+        P         PETL +D  R+   R+ +  +     +V  +  AL     A   ++      ++ +L    +  + D+ +H   +A+  LG  G A +   +E R   +L      V++L +QR    + + L+  E            +     L+ +   +  +      + RHNEA     Y +L+ +AL
Sbjct:  421 TKEVFANDRLAHELILNPNYQI--PSLDDA--PLTLHATVAQTMRQAFWDQLAATRDRARIVGSFV-------DLRDQLTAVLKHKA-----LATALPTAHLEALASSSSWDE--WATVLQQMLRAILHGEAPARTSSTHAWLNRSQE----------TPASEAA---------WVEALVRFLQFGFAKVDEIQIDSMNAHLKLLAPYVARHGVEHEQKKFALKLEQGATTLAATSQWLTRQLATA------APTLRDALTAGDRR-------------AYRSLVQDAFVGLVTSGMAVDTP--------WPETLELDKDRVRDLRNQMDVLTMQACLVTLIQGALAPHHVAYAPKDAAAFCDQIRILAHADETRLPDLAVHASAVAARVLGAKGQALDTAALERRAEHMLDPANA-VYKLFFQRVTQALTSFLQTNE------------MELHPTLSVLAPHVTTMVQAAAKLARHNEAVHCHYYNRLIREAL 837          
BLAST of EWM29640.1 vs. NCBI_GenBank
Match: gi|585107187|gb|EWM25426.1| (T-complex 11 [Nannochloropsis gaditana])

HSP 1 Score: 102.064 bits (253), Expect = 2.412e-18
Identity = 76/262 (29.01%), Postives = 125/262 (47.71%), Query Frame = 0
Query:  515 DFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPS-----ISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPVSSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQGRPVSVFSEDDLPETLAIDAQRL 771
            ++ P L LV E+ ++L S+TP R DL +E+   LD  LL Q+  + LLD+  ++ +L++    ++ L+AP R A T  W+   ++             V  S+  S  +K ++PS     +  +F  +  ++D+   DI ++HI+   P+   HG  +ER +F  R   G   +    +WL+ V+AS    E +  +SS+  GD               A R LL RA   LL       +PV +    +LPETL  D  R+
Sbjct:  559 EYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKE------------VHASMSASQHAK-YIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASP---ENASHLSSIAQGD-------------AMAHRNLLSRAMKCLLQ------QPVRIEICSNLPETLRYDGLRM 785          
BLAST of EWM29640.1 vs. NCBI_GenBank
Match: gi|553196590|ref|XP_005856379.1| (t-complex 11 like isoform cra b [Nannochloropsis gaditana CCMP526] >gi|422292680|gb|EKU19982.1| t-complex 11 like isoform cra b [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 102.064 bits (253), Expect = 2.433e-18
Identity = 76/262 (29.01%), Postives = 125/262 (47.71%), Query Frame = 0
Query:  515 DFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPS-----ISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPVSSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQGRPVSVFSEDDLPETLAIDAQRL 771
            ++ P L LV E+ ++L S+TP R DL +E+   LD  LL Q+  + LLD+  ++ +L++    ++ L+AP R A T  W+   ++             V  S+  S  +K ++PS     +  +F  +  ++D+   DI ++HI+   P+   HG  +ER +F  R   G   +    +WL+ V+AS    E +  +SS+  GD               A R LL RA   LL       +PV +    +LPETL  D  R+
Sbjct:  559 EYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKE------------VHASMSASQHAK-YIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASP---ENASHLSSIAQGD-------------AMAHRNLLSRAMKCLLQ------QPVRIEICSNLPETLRYDGLRM 785          
BLAST of EWM29640.1 vs. NCBI_GenBank
Match: gi|1173932560|gb|OQR84509.1| (hypothetical protein ACHHYP_13293 [Achlya hypogyna])

HSP 1 Score: 100.138 bits (248), Expect = 8.579e-18
Identity = 127/565 (22.48%), Postives = 232/565 (41.06%), Query Frame = 0
Query:  378 EGEARLRHLEAALQQLVGQRDTARRMDMARQVAEEGKQRDGKIHGRSELKPLASDQDETLMSMDSEPEGELHASGDTQTDTIFSNEWLVHEICVLPKSRF--LQVSMEDASQPLTCGNKPSQGDTQAYWETVTQTLLMGDFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPSISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPVSSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQGRPVSVFSEDDLPETLAIDAQRLGLARHALWCVASAGTVVAYL-GQALGRQLRAEERQVVVQELMVLLPEADVEVEDIGLHVGHIASTRLGMTGAGERKMMEERVRRLLQEGRCPVFQLLYQRAVDVVHAVLEREESTTEDESGRVAHLCQQQGLTGMESRILKICDVMLLVTRHNEACFLSLYQKLVSDAL 939
            + + +L  L A+++Q  G    A+++       E   QR   +  +    P +S   + L    S+P+          T  +F+N+ L HE+ + P  +   L+++       + C  +      +A+W+      L GD + ++    EL D+L S+   +A     +  +L  A L + L+   +      ++L    R IL  EAPARN ST   L  +  +          P    ++ D+ V+           EF   KVD+IH+D  N+H++   P+   HG   E+ +F  +L  G+ ++     WLR  VA+A       P+        R  L  G R     A RT+L  A+ +L+++         V  +   PET A+D  R+   R+ +  +A   +++  L G    R+  A +      ++ +L   +D  V D+ +H    A+    +  + +R  +  RV   L      VF L ++R +  +   L            R   L     L  + +++  +      + RHNEA  +  Y +L+ +A+
Sbjct:  349 KSQTQLTQLRASMEQSFGLSVAAKKIAKVEADVEAHLQRKDPLPTKKAETPPSSPIRKPL----SKPDLSF-------TKEVFANDALAHELILNPDYQIPSLELAPPSLHATVACTMR------RAFWDQ-----LRGDRNRIVGTFVELRDQLSSVLKHKA-----LAAALPNAHL-EALAAPTVAWADWAAVLELLLRAILAGEAPARNDSTTAHLATVAGI--------APPSTEAAIVDALVN---------FLEFAFAKVDEIHIDSMNAHLKALGPYVARHGVEHEQKKFALKLESGIVTLAHTEQWLRSHVAAA-----PTPL--------RSELAAGNR----AAFRTVLHTAFVALVSE--------HVAGDSMWPETFALDKDRVRGLRNQVDLLAMQASLITILQGSVAPRRYSAADAAAFCSQIAILTEASDTRVGDLAVHTAAEAAR---LVPSVDRAAVMRRVEHTLDPSDA-VFALFFKRVLQTLSTYL------------RSNALEIHPTLEVLRAQLTALVQTAAKLARHNEAVHVHYYNRLIREAM 827          
BLAST of EWM29640.1 vs. NCBI_GenBank
Match: gi|813149344|ref|XP_012200319.1| (hypothetical protein SPRG_20093 [Saprolegnia parasitica CBS 223.65] >gi|641535063|gb|KDO28987.1| hypothetical protein SPRG_20093 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 90.8929 bits (224), Expect = 6.130e-15
Identity = 115/501 (22.95%), Postives = 198/501 (39.52%), Query Frame = 0
Query:  456 TDTIFSNEWLVHEICVLPKSRFLQVSMEDASQPLTCGNKPSQGDTQAYWETVTQTL----LMGDFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFS--------ILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPSISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPV-SSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQGRPVSVFSEDDLPETLAIDAQRLGLARHALWCVASAGTVVAYLGQALGRQLRAE---ERQVVVQELMVLLPEADVEVEDIGLHVGHIASTRLGMTGAG-ERKMMEERVRRLLQEGRCPVFQLLYQRAVDVVHAVLEREESTTEDESGRVAHLCQQQGLTGMESRILKICDVMLLVTRHNEACFLSLYQKLVSDAL 939
            T  +F+N+ L HE+ + P  +    S++DA  PLT     +Q   QA+W+ +  T     ++G F                      DLRD++   L    L   L    L++    S        +L+   R IL  EAPAR +ST+ WL RL+E           P    +         WV ++    +F   KVD+I +D  N+H++   P+   HG   E+ +F  +L  G  ++     WL   V+ A     S  V ++L +GD+R             A R+L+  A+  L+           + +++  PETL +D  R+   R+ +  +     ++  +  AL     A    +      ++ +L   ++  + D+ +H    A+  L   G   +    E R    L      V++L +QR    + + L   E       G ++       +T M     K+        RHN+A     Y +L+ +AL
Sbjct:  393 TKEVFANDRLAHELILNPNYQI--PSLDDA--PLTLHASVAQTMRQAFWDQLAATRDRARIVGSF---------------------VDLRDQLTTVLKHKALATALPTTHLEALAASSSSWTEWATVLQQMLRAILHGEAPARTSSTQAWLDRLQE----------TPASEAA---------WVEALVRFLQFGFAKVDEIQIDSMNAHLKVLAPYVARHGVEHEQKKFALKLEHGAITLAATSQWLARHVSRA-----SPAVRAALTNGDRR-------------AYRSLVTEAFVGLVTS--------GMAADETWPETLEMDHDRVLDLRNQMDVLTMQACLLTLIHGALAPHHVAHAPSDATAFCDQIRILAHASETRLPDLAVHASAEAARVLCAKGYSLDTTAFERRAEHTLDPANA-VYKLFFQRVTKALASFLTTNEMELHATLGVLS-----PHVTAMVQAAAKLV-------RHNDAVHCHYYNRLIREAL 810          
BLAST of EWM29640.1 vs. NCBI_GenBank
Match: gi|1173927877|gb|OQR81665.1| (hypothetical protein THRCLA_23319, partial [Thraustotheca clavata])

HSP 1 Score: 84.3445 bits (207), Expect = 4.696e-13
Identity = 144/643 (22.40%), Postives = 263/643 (40.90%), Query Frame = 0
Query:  155 REHAILVLQRWFRNLREHWRLVKQVQEATSQSLLPLLEAAEASRAGSWASEWEAMCRQGSLEFHACHMLQGLGFAREGQAADKSL-THPMT---LLSALLISVHPEAIMTASPVRSKRRRREHERRGIALVQAASRVHETLLALYHCLHQAKMPRWVMLRAVVQVRKAFRLYVVQRVRYQGVSDAEAARLVRRVTHAAVGVFKAMHRSQQKSQVDAAQAIECAEAIIEGEAR--LRHLEAALQQLVGQRDTARRMDMARQVAEEGKQRDGKIHGRSELKPLASDQDETLMSMDSEPEGELHASGDTQTDTIFSNEWLVHEICVLPKSRFLQVSMEDASQPLTCGNKPSQGDTQAYWETVTQTLLMGDFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPSISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPVSSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQGRPVSVFSEDDLPETLAIDAQRLGLARHALWCVASAGTVVAYL 791
            R  A   LQ WFR+    W+ V+Q         LPL+ A +        S W+ M    + E  +  ++Q    A    A  K+L + PM    LL A ++  HP   M            E      AL  AASRV + L  ++  L           R++V    +++ +    + YQ + ++  ++   ++    + ++  +++          QA++  +  I  +++  L  L A+++Q  G      ++      AE     +  +  + E K  AS     +    S+P+ E        T  +F+N+ L HE+ + P     Q+  +   Q L   ++ +    Q +WE +  +    D + ++    EL D L S+   +A     +  ++ +  L  + S  + D  +    L      IL  EAP RN+ST  W  RL  +          P  +         ++W   +    +F  EKV++I +D  N+H++   P+   HG   E+ +F ++L  G+  +D+   WL+  VA+A  Q +    SSL  GD+              A  +L + A+ SL+   S+    +S++     PET  +D +R+   R+ +  VA   T++  L
Sbjct:  157 RSQAAKQLQTWFRS----WKRVRQAFTVA----LPLIPAMQNV-----VSTWDQMS-NSTFE-KSMGIVQNRKCAAAANAITKTLCSTPMNYRVLLMAGMMKYHPNDTM------------EDIGFSAALACAASRVVDELTTMHQTLK---------TRSLVSFASSWKHWEAYCLSYQALFNSWKSKNHSKMDAEMIKLYGEVYKLH-------LQAMKTEDQDIYNKSKQQLEQLRASIEQSFGATVAKTKL------AEVEATIEASLKPKKEEK--ASPPSSPIRKPISKPDLEF-------TKEVFANDKLAHELILNPD---YQMPSQQDDQLL--QSRIATTMRQVFWEQLAAS---KDRNRVVSTFVELRDELSSVLKHKA-----LRNAVPIEHLTNLASNAVWDEWVKVFDLFLDA--ILRGEAPVRNSSTVEWRERLHAM--------NAPSSK---------EEWFAFVIEFLKFGFEKVNEIQIDSINAHLKALAPYVARHGVEHEQKKFAQKLEAGVIQLDQTAKWLKIYVANASEQLR----SSLASGDR-------------AAFHSLYQEAFISLI---SKHVADLSLW-----PETFEMDKERIRSIRNQVDLVAIQATILTLL 684          
BLAST of EWM29640.1 vs. NCBI_GenBank
Match: gi|1043306610|gb|OBZ91227.1| (T-complex protein 11-like protein 1 [Choanephora cucurbitarum])

HSP 1 Score: 79.337 bits (194), Expect = 1.879e-11
Identity = 110/505 (21.78%), Postives = 215/505 (42.57%), Query Frame = 0
Query:  442 SEPEGELHASGDTQTDTIFSNEWLVHEICVLPKSRFLQVSMEDASQPLTCGNKPSQGDTQAYWETVTQTLLMG--DFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPSISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPVSSLRHGDQRVALLEGV--RQQSGEAMRTLLRRAYASLLADSSRQGRPVSVFSEDDLPETLAIDAQRLGLARHALWCVASAGTVVA---YLGQALGRQLRAEERQVVVQELMVLLPEADVEVEDIGLHVGHIASTRLGMTGAGERKMMEERVRRLLQEGRCPVFQLLYQRAVDVVHAVLEREESTTEDESGRVAHLCQQQGLTGMESRILKICDVMLLVTRHNEACFLSLYQKLVSDAL 939
            SE  G+L  SG  Q  +  +NE+L HE+ + P+ +  +    D         +      +A+++ + Q +  G  D S L  ++Q++  RL+S+      L  +I  ++D++L+KQ + +   D Q + S +  T    +C  AP R+                             +Q++  S   +  +  +   L    D +++D+ N  +R   PH  +    +ER +F   L QG   + R  +WL        CQ     V++ R+        EGV   + +  +   +   A+ SLL     Q +P++  S  DLPETL +D +R+G  ++ +     A T+VA    L +  G  +  ++   +   L  +L ++   ++++ L +   A+ R        R M++  V + + +    V+ LL +R   V+   ++  +  TE        +    GL  + +++  I   +L +  HN   + S Y  ++++AL
Sbjct:  353 SEQLGQL-LSGFAQPTSGITNEFLAHELIMDPEFKLQRHGSTDE-----LEKRVRLMAEKAFFDKLEQDIQQGKADMS-LPSVIQDVKMRLLSLVRPHTSLHKQIDEAIDLSLIKQQIKQHSFDMQHMISYVLNTMSG-MC--APVRDEE---------------------------IQNAKASTGMIDQMRSILTIL----DNMNLDLANFRLRSLRPHLMSIAVEYEREKFATMLNQGTIQLVRTKAWLTDST-QKLCQ-----VAAQRNP-------EGVLPEKNNKPSHDAVFEDAFVSLLV----QPQPIAHLS--DLPETLYLDVKRMGEYQNEV----QATTMVAALLMLAKNFG-SVHQQQLSRLASRLFTMLEDSSTSIDNLALEIERSANVR-----PERRTMVKTMVDKTINQTDT-VYSLLSRRISSVIKNTIQNNQFVTE-------AVLTSNGLDPIRAQLQSISLKVLRLANHNRKVYSSWYSDIIAEAL 779          
The following BLAST results are available for this feature:
BLAST of EWM29640.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112212|gb|EWM29640.1|0.000e+0100.00T-complex 11 [Nannochloropsis gaditana][more]
gi|299471356|emb|CBN79311.1|4.415e-3137.24t-complex 11 (mouse) like 2, isoform CRA_a (Partia... [more]
gi|299471621|emb|CBN76843.1|5.263e-2325.89novel protein containing a T-complex protein 11 do... [more]
gi|669163058|ref|XP_008617091.1|5.783e-2023.68hypothetical protein SDRG_12789 [Saprolegnia dicli... [more]
gi|585107187|gb|EWM25426.1|2.412e-1829.01T-complex 11 [Nannochloropsis gaditana][more]
gi|553196590|ref|XP_005856379.1|2.433e-1829.01t-complex 11 like isoform cra b [Nannochloropsis g... [more]
gi|1173932560|gb|OQR84509.1|8.579e-1822.48hypothetical protein ACHHYP_13293 [Achlya hypogyna... [more]
gi|813149344|ref|XP_012200319.1|6.130e-1522.95hypothetical protein SPRG_20093 [Saprolegnia paras... [more]
gi|1173927877|gb|OQR81665.1|4.696e-1322.40hypothetical protein THRCLA_23319, partial [Thraus... [more]
gi|1043306610|gb|OBZ91227.1|1.879e-1121.78T-complex protein 11-like protein 1 [Choanephora c... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1041rna1041Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications