EWM29626.1, cds1039 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29626.1 vs. NCBI_GenBank
Match: gi|585112198|gb|EWM29626.1| (tropinone reductase [Nannochloropsis gaditana]) HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0
Query: 1 MATATPPIGSPARWRLDGQTVLCTGGTKGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQLAHPLLKKAGKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPWYIETPLTAQVLGDPVYRKEVEDRTPMKRVGSSEEISGICAFLAMSGSSYITGQTVCVDGGFTVNGFY 266
MATATPPIGSPARWRLDGQTVLCTGGTKGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQLAHPLLKKAGKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPWYIETPLTAQVLGDPVYRKEVEDRTPMKRVGSSEEISGICAFLAMSGSSYITGQTVCVDGGFTVNGFY
Sbjct: 1 MATATPPIGSPARWRLDGQTVLCTGGTKGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQLAHPLLKKAGKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPWYIETPLTAQVLGDPVYRKEVEDRTPMKRVGSSEEISGICAFLAMSGSSYITGQTVCVDGGFTVNGFY 266
BLAST of EWM29626.1 vs. NCBI_GenBank
Match: gi|470143621|ref|XP_004307471.1| (PREDICTED: tropinone reductase homolog [Fragaria vesca subsp. vesca]) HSP 1 Score: 327.02 bits (837), Expect = 6.560e-110 Identity = 151/265 (56.98%), Postives = 191/265 (72.08%), Query Frame = 0
Query: 1 MATATPPIGSPARWRLDGQTVLCTGGTKGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQLAHPLLKKAGKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPWYIETPLTAQVLGDPVYRKEVEDRTPMKRVGSSEEISGICAFLAMSGSSYITGQTVCVDGGFTVNGF 265
MA +T + +P RW L G T L TGGT+GIG A+VEE ASLGA VFTC+R+A +L CLKEW+AKG+ + GI DVS R +MEQV SF GRL++ VNNVGTNIRKPT +YT ++Y K+M NL+STYHLCQ+AHPLLK +G G V+ + SVAG++ + SG++Y +KAA+ QL+KNLACEWA D IR N VAPWY T L +L D + +EV RTP+ RV EE+S + AFL + +SYITGQ +CVDGG T N F
Sbjct: 1 MAESTRNLATP-RWSLTGTTALVTGGTRGIGYAVVEELASLGAYVFTCSRNAEELERCLKEWSAKGFRITGIVCDVSVKSEREKLMEQVGVSFAGRLNIFVNNVGTNIRKPTTEYTFEEYSKVMSTNLESTYHLCQIAHPLLKGSGAGSVVFISSVAGLVSLGSGTIYAASKAAINQLTKNLACEWAKDNIRSNAVAPWYTRTSLVEHMLEDKKFLEEVTSRTPLNRVAEPEEVSSLVAFLCLPAASYITGQIICVDGGMTANSF 264
BLAST of EWM29626.1 vs. NCBI_GenBank
Match: gi|226507514|ref|NP_001149071.1| (uncharacterized protein LOC100282692 [Zea mays] >gi|195624500|gb|ACG34080.1| tropinone reductase [Zea mays] >gi|1142627403|gb|ONL96465.1| Tropinone reductase [Zea mays]) HSP 1 Score: 319.316 bits (817), Expect = 9.348e-107 Identity = 147/264 (55.68%), Postives = 193/264 (73.11%), Query Frame = 0
Query: 3 TATPPIGSPARWRLDGQTVLCTGGTKGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQLAHPLLKKAGKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPWYIETPLTAQVLGDPVYRKEVEDRTPMKRVGSSEEISGICAFLAMSGSSYITGQTVCVDGGFTVNGFY 266
T+ IGS RW L G+T L TGGT+GIG+A+VEE A+LGA V TC+R A +L +KEW A+G+ V G D+S+ D R ++ +VA F G+L++LVNNVGTNIRKPT ++T ++Y +M NL+S YHLCQ+AHPLLK +G G +I + SVAG IGI SG++Y +TK A+ QL+KNLACEWA D IR N+VAPWYI T LT +L + + ++V RTP+ RVG E+S + AFL M GS+YI+GQT+ VDGG TVNGFY
Sbjct: 6 TSGTAIGSSGRWALHGKTALVTGGTRGIGRAVVEELAALGAAVHTCSRKAEELGERIKEWEARGFSVTGSVCDLSERDQRERLLREVADRFGGKLNILVNNVGTNIRKPTTEFTAEEYSFLMATNLESAYHLCQIAHPLLKLSGSGSIIFISSVAGAIGIFSGTIYAMTKGAINQLTKNLACEWAKDNIRANSVAPWYITTSLTEGILANKNFEEQVVSRTPLGRVGEPGEVSALVAFLCMPGSTYISGQTIAVDGGMTVNGFY 269
BLAST of EWM29626.1 vs. NCBI_GenBank
Match: gi|1149732342|ref|XP_020191269.1| (tropinone reductase homolog At5g06060-like isoform X2 [Aegilops tauschii subsp. tauschii] >gi|475620769|gb|EMT31236.1| Tropinone reductase-like protein [Aegilops tauschii]) HSP 1 Score: 320.857 bits (821), Expect = 1.148e-106 Identity = 150/266 (56.39%), Postives = 189/266 (71.05%), Query Frame = 0
Query: 1 MATATPPIGSPARWRLDGQTVLCTGGTKGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQLAHPLLKKAGKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPWYIETPLTAQVLGDPVYRKEVEDRTPMKRVGSSEEISGICAFLAMSGSSYITGQTVCVDGGFTVNGFY 266
MA A S RW L G+ L TGGT+GIG+A+VEE A+LGA V TC+R ++L LKEW AKG+ V G DVS D R +++ VAG F G+LD+L+NNVGTN RKPT +Y+ D+Y IM NL+S YHLCQLAHPLLK +G ++ + SV+GV+ I SGS+YG+TK AM QL+KNLACEWA D IR+N+VAPWYI+T L + L + + RTPM+RVG EE+S + AFL M GSSYITGQT+ VDGG T+NG Y
Sbjct: 48 MAAADDIGASAGRWSLHGRRALVTGGTRGIGRAVVEELAALGAAVHTCSRKEAELGERLKEWEAKGFRVTGSVCDVSVRDQRELLLQDVAGRFAGKLDILINNVGTNHRKPTTEYSADEYSFIMATNLESAYHLCQLAHPLLKASGVASIVFISSVSGVVAISSGSIYGMTKGAMNQLAKNLACEWAKDNIRINSVAPWYIKTSLVEEDLAKEDFVDSIARRTPMRRVGEPEEVSSLVAFLCMPGSSYITGQTISVDGGMTINGMY 313
BLAST of EWM29626.1 vs. NCBI_GenBank
Match: gi|241919348|gb|EER92492.1| (hypothetical protein SORBI_3001G424300 [Sorghum bicolor]) HSP 1 Score: 318.931 bits (816), Expect = 1.386e-106 Identity = 144/264 (54.55%), Postives = 194/264 (73.48%), Query Frame = 0
Query: 3 TATPPIGSPARWRLDGQTVLCTGGTKGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQLAHPLLKKAGKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPWYIETPLTAQVLGDPVYRKEVEDRTPMKRVGSSEEISGICAFLAMSGSSYITGQTVCVDGGFTVNGFY 266
T+ IG+ RW L G+T L TGGT+GIG+A+VEE A+LGA V TC+R A +L +KEW A+G+ V G D+S+ D R ++ +V F G+L++LVNNVGTNIRKPT ++T ++Y +M NL+S YHLCQ+AHPLLK +G G +I + SV G++G+ SG++Y +TK A+ QL+KN+ACEWA D IR N+VAPWYI T LT ++L + + ++V RTP+ RVG EEIS + AFL M GS+YITGQT+ VDGG TVNGFY
Sbjct: 6 TSGTAIGTSGRWALHGKTALVTGGTRGIGRAVVEELAALGAAVHTCSRKAEELGERIKEWEARGFRVTGSVCDLSERDQRERLLREVGNRFGGKLNILVNNVGTNIRKPTTEFTAEEYSFVMATNLESAYHLCQIAHPLLKLSGSGSIIFISSVCGMVGVFSGTIYAMTKGAINQLTKNIACEWAKDNIRANSVAPWYITTSLTERLLANKDFEEQVVSRTPLGRVGEPEEISALVAFLCMPGSTYITGQTIAVDGGMTVNGFY 269
BLAST of EWM29626.1 vs. NCBI_GenBank
Match: gi|357112930|ref|XP_003558258.1| (PREDICTED: tropinone reductase homolog At5g06060-like [Brachypodium distachyon] >gi|944087029|gb|KQK22381.1| hypothetical protein BRADI_1g66900 [Brachypodium distachyon]) HSP 1 Score: 318.546 bits (815), Expect = 1.426e-106 Identity = 148/257 (57.59%), Postives = 183/257 (71.21%), Query Frame = 0
Query: 10 SPARWRLDGQTVLCTGGTKGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQLAHPLLKKAGKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPWYIETPLTAQVLGDPVYRKEVEDRTPMKRVGSSEEISGICAFLAMSGSSYITGQTVCVDGGFTVNGFY 266
S ARW L G+T L TGGT+GIG+A+VEE A+LGA V TC+R S+L LKEW AKG+ V G DVS D R ++ VAG F G+LD+LVNNVGTN KPT +Y+ D Y IM NL+S YHLCQLAHPLLK +G ++ + SV+GV+ I SGS+Y +TK AM QL+KNLAC+WA D IR N+VAPWYI+T LT + L + + RTPM+RVG EE+S + AFL M SSYITGQT+ VDGG T+NG Y
Sbjct: 10 SAARWSLHGKTALVTGGTRGIGRAVVEELAALGAAVHTCSRKESELRERLKEWEAKGFRVTGSVCDVSVRDQRELLLRDVAGRFAGKLDILVNNVGTNFTKPTTEYSADDYSFIMTTNLESAYHLCQLAHPLLKASGSASIVFISSVSGVVAISSGSIYAMTKGAMNQLAKNLACDWAKDNIRTNSVAPWYIKTSLTEENLAREDFVDSIVRRTPMRRVGEPEEVSSLVAFLCMPASSYITGQTISVDGGMTINGLY 266
BLAST of EWM29626.1 vs. NCBI_GenBank
Match: gi|1137207343|gb|OMO76666.1| (Short-chain dehydrogenase/reductase SDR [Corchorus olitorius]) HSP 1 Score: 315.464 bits (807), Expect = 3.156e-105 Identity = 145/254 (57.09%), Postives = 185/254 (72.83%), Query Frame = 0
Query: 12 ARWRLDGQTVLCTGGTKGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQLAHPLLKKAGKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPWYIETPLTAQVLGDPVYRKEVEDRTPMKRVGSSEEISGICAFLAMSGSSYITGQTVCVDGGFTVNGF 265
+RW L+G T L TGGT+GIG AIVEE A LGA V+TC+R+ ++L CLKEW KG+ V+G D SD D R+ ++E V F G+L++LVNNVGTNIRKPT +Y+ ++Y K+M N +S YHLCQLAHPLLK +G G ++ + SVAG++ I SGS+YG TKAA+ QL+KNLACEWA D IR N+VAPWYI T L +L + +V RTP++RVG EE+S I FL + SSYITGQ + VDGGFT NGF
Sbjct: 13 SRWSLEGMTALVTGGTRGIGHAIVEELAGLGAAVYTCSRNEAELGKCLKEWEGKGFVVKGSVCDASDKDQRQKLIENVGSVFNGKLNILVNNVGTNIRKPTVEYSAEEYSKLMTTNYESVYHLCQLAHPLLKASGAGSIVFISSVAGLLHIGSGSIYGPTKAAINQLTKNLACEWAKDNIRTNSVAPWYIRTSLVEHLLERKEFFDKVISRTPLERVGEPEEVSSIVGFLCLPASSYITGQIISVDGGFTANGF 266
BLAST of EWM29626.1 vs. NCBI_GenBank
Match: gi|108707393|gb|ABF95188.1| (Tropinone reductase, putative, expressed [Oryza sativa Japonica Group]) HSP 1 Score: 313.153 bits (801), Expect = 2.041e-104 Identity = 142/265 (53.58%), Postives = 190/265 (71.70%), Query Frame = 0
Query: 2 ATATPPIGSPARWRLDGQTVLCTGGTKGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQLAHPLLKKAGKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPWYIETPLTAQVLGDPVYRKEVEDRTPMKRVGSSEEISGICAFLAMSGSSYITGQTVCVDGGFTVNGFY 266
A + +G+P RW L G+T L TGGT+GIG+A+VEE A+LGA V TC+R +L+ LKEW A+G+ V D+S D R ++ QVA F G+LD+LVNNVGTNIRKPT +++ ++Y +M NL+S YHLCQL+HPLLK +G G ++ + SV G++ + SGS+Y +TK A+ QL+KNLACEWA D IR N++APWYI T LT +L + + V RTP++RVG EE+S + AFL M GSSYITGQT+ VDGG T+NG Y
Sbjct: 5 AETSAKVGAPRRWSLQGKTALVTGGTRGIGRAVVEELAALGATVHTCSRKEEELSERLKEWEARGFRVTTSVCDLSVRDQRERLLRQVADLFGGKLDILVNNVGTNIRKPTTEFSAEEYSFMMATNLESAYHLCQLSHPLLKASGSGSIVFISSVCGLVAVFSGSLYAMTKGAINQLTKNLACEWARDNIRSNSIAPWYIRTSLTEGLLANKDFEGAVVSRTPLRRVGEPEEVSSLVAFLCMPGSSYITGQTISVDGGMTINGLY 269
BLAST of EWM29626.1 vs. NCBI_GenBank
Match: gi|326509923|dbj|BAJ87177.1| (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 312.768 bits (800), Expect = 3.598e-104 Identity = 148/264 (56.06%), Postives = 187/264 (70.83%), Query Frame = 0
Query: 4 ATPPIGSPA-RWRLDGQTVLCTGGTKGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQLAHPLLKKAGKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPWYIETPLTAQVLGDPVYRKEVEDRTPMKRVGSSEEISGICAFLAMSGSSYITGQTVCVDGGFTVNGFY 266
A IG+ A RW L G+T L TGGT+GIG+A+VEE A+LGA V TC+R ++L LKEW AKG+ V G DVS R ++ VA F G+LD+L+NNVGTN RKPT +Y+ D+Y IM NL+S YHLCQLAHPLLK + ++ + SV+GV+ I SGS+YG+TK AM QL+KNLACEWA D IR+N+VAPWYI+T L + L + + RTPM+RVG EE+S + AFL M GSSYITGQT+ VDGG T+NG Y
Sbjct: 3 AVDDIGASAGRWSLHGRTALVTGGTRGIGRAVVEELAALGAAVHTCSRKEAELGDRLKEWEAKGFRVTGSVCDVSVRGQRELLLRDVADRFAGKLDILINNVGTNRRKPTTEYSADEYSFIMATNLESAYHLCQLAHPLLKASAVASIVFISSVSGVVAISSGSIYGMTKGAMNQLAKNLACEWAKDNIRINSVAPWYIKTSLVEEDLAKKDFVDIIARRTPMRRVGEPEEVSSLVAFLCMRGSSYITGQTISVDGGMTINGMY 266
BLAST of EWM29626.1 vs. NCBI_GenBank
Match: gi|697187936|ref|XP_009603003.1| (PREDICTED: tropinone reductase homolog At5g06060-like isoform X2 [Nicotiana tomentosiformis]) HSP 1 Score: 312.383 bits (799), Expect = 4.723e-104 Identity = 142/258 (55.04%), Postives = 189/258 (73.26%), Query Frame = 0
Query: 8 IGSPARWRLDGQTVLCTGGTKGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQLAHPLLKKAGKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPWYIETPLTAQVLGDPVYRKEVEDRTPMKRVGSSEEISGICAFLAMSGSSYITGQTVCVDGGFTVNGF 265
IGS +RW L G T L TGGT+GIG A+VEE A LGA V+TC+R+ ++L L+EW KG +V+G D S + R +ME V+ +F G+L++LVNNVGTNIRKPT Y+ ++Y +++ NL+S YHLCQLAHPLLK +G G V+ + SVAG++ + SGS+YG TK AM QL++NLACEWA+D IRVN VAPWYI T L +L + + V RTP++R G S+E+S + A+L + G+SYITGQ + VDGGFTVNGF
Sbjct: 7 IGSSSRWSLSGFTALVTGGTRGIGHAVVEELAELGATVYTCSRNQAELNERLQEWAVKGLQVKGSVCDASSREQRVQLMENVSSAFDGKLNILVNNVGTNIRKPTTDYSAEEYARLLSTNLESAYHLCQLAHPLLKASGNGSVVFISSVAGLVHLSSGSIYGATKGAMNQLTRNLACEWANDSIRVNGVAPWYIRTSLVEHLLENKTFLDGVISRTPLRRPGESQEVSSLVAYLCLPGASYITGQVIAVDGGFTVNGF 264 The following BLAST results are available for this feature:
BLAST of EWM29626.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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