EWM29635.1, cds1038 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29635.1 vs. NCBI_GenBank
Match: gi|585112207|gb|EWM29635.1| (heme steroid binding domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 577.015 bits (1486), Expect = 0.000e+0 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
Query: 1 MFESFLQTLEAFRQDKTAAAMLAATVAVTVTVFYWVTKDPPLPKGPGGKAPDEEPEPPRNFTATQLREFTGTKEDDPIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDDPNLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLVTPPSGLSLTLAEIAQYKGEEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLID 282
MFESFLQTLEAFRQDKTAAAMLAATVAVTVTVFYWVTKDPPLPKGPGGKAPDEEPEPPRNFTATQLREFTGTKEDDPIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDDPNLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLVTPPSGLSLTLAEIAQYKGEEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLID
Sbjct: 1 MFESFLQTLEAFRQDKTAAAMLAATVAVTVTVFYWVTKDPPLPKGPGGKAPDEEPEPPRNFTATQLREFTGTKEDDPIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDDPNLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLVTPPSGLSLTLAEIAQYKGEEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLID 282
BLAST of EWM29635.1 vs. NCBI_GenBank
Match: gi|219128074|ref|XP_002184247.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404478|gb|EEC44425.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 199.134 bits (505), Expect = 4.562e-59 Identity = 104/232 (44.83%), Postives = 143/232 (61.64%), Query Frame = 0
Query: 59 RNFTATQLREFTGTKEDD-----PIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDD-PNLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLV----TPPSGLSLTLAEIAQYKGEEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKL 280
RNFTA QLR F G KED P+Y+++ G V+DVS R+FYGPDG Y FAG + A A S +E+ LDD L +K L GW++K+ YY+ YP+ GRL+ P L+ E+A+ G+ P PEG+A PPIY+ KVFDMSFGG FYG GGPYH AG D SR LAKMS ++ D ++ ++SD++++Q + + +W++ F + YP+VGKL
Sbjct: 62 RNFTAKQLRYFNGEKEDKGDDLKPVYLSVNGTVFDVSDGRNFYGPDGPYAAFAGRECGVALAKMSFDEEHLDDFDGCTKLNPGEKMELEGWIDKFTYYRPYPIKGRLIPDQCMPSPERVLSKEELAKNNGKGP-------TPEGYATPPIYIGAGDKVFDMSFGGVTFYGEGGPYHRFAGYDVSRSLAKMSLDEEDIKNSDVSDMSEKQLKIMNDWIKTFEERKSYPLVGKL 286 HSP 2 Score: 72.0182 bits (175), Expect = 4.614e-11 Identity = 42/116 (36.21%), Postives = 65/116 (56.03%), Query Frame = 0
Query: 167 SLTLAEIAQYKGEEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRN-LSDLTDRQRQTLEEWVEKFINGRKYPVVGKLI 281
+ T ++ + GE+ +GD P+Y++V G VFD+S GR FYGP GPY AG++ LAKMSF++ + + + L ++ LE W++KF R YP+ G+LI
Sbjct: 63 NFTAKQLRYFNGEKEDKGDD--------LKPVYLSVNGTVFDVS-DGRNFYGPDGPYAAFAGRECGVALAKMSFDEEHLDDFDGCTKLNPGEKMELEGWIDKFTYYRPYPIKGRLI 169
BLAST of EWM29635.1 vs. NCBI_GenBank
Match: gi|298711224|emb|CBJ32444.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 196.052 bits (497), Expect = 4.877e-58 Identity = 111/264 (42.05%), Postives = 152/264 (57.58%), Query Frame = 0
Query: 20 AMLAATVAVTVTVFYWVTKDPPLPKGPGGKAPDEEPEPPRNFTATQLREFTGTKEDDPIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDDPNLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLVTPPSG-LSLTLAEIAQYKGEEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLID 282
AML T + + Y + + P ++ + P PPRNFT QL EF G E P YVAL+G+V+DVSS + Y G Y FAGHD + + A SL+ DL+ + +L + ESL GWVEKYK + YPVVG++VTPP+ +L E+ + G IPEG+AAPPIYV V GKV+DMS+GG YGPG Y+ AG+D S LAKMSF ++ ++S L+ L++W K +KYPV+G + +
Sbjct: 17 AMLGFTALGALVLMYLMFQPARAPATDDDESAADRPPPPRNFTIEQLHEFDGRDEATPAYVALRGEVFDVSSKPEHYKVGGGYHLFAGHDASYSLATGSLDPADLEK-SWSELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQPREFSLEELRPFDG-------TSDIPEGYAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSKEDMTVLQDWASKM--EKKYPVIGTIAN 270
BLAST of EWM29635.1 vs. NCBI_GenBank
Match: gi|1173953791|gb|OQS01306.1| (heme/steroid binding domain-containing protein [Achlya hypogyna]) HSP 1 Score: 190.66 bits (483), Expect = 2.727e-56 Identity = 103/225 (45.78%), Postives = 139/225 (61.78%), Query Frame = 0
Query: 58 PRNFTATQLREFTGTKEDDPIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDDPNLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLVTPPSGLSLTLAEIAQYKGEEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLID 282
PR FT +LR F G ++ PIYVA++G++YDVSS DFYGP Y FAG + RA A S E KDLD+ ++ DL + + E L+ W+ K++ + YPVVGRL+ LT AE+A+Y + PIYVA+ G ++D++ GGR YGP G Y AG+D SR LA MSF+ A+ E+ L DLTD QR+TL++W KF + KY VVGKL+D
Sbjct: 47 PRYFTPAELRAFNG-EDGAPIYVAIKGEIYDVSSKADFYGPGAGYHLFAGREAARALAKMSFEAKDLDNTDVSDLNFMENEVLNDWIVKFRDFNSYPVVGRLLDQR---DLTRAELAKYTKQ-----------------PIYVAIKGTIYDVTLGGREHYGPNGGYKLFAGQDASRALALMSFDAANLETPTLDDLTDTQRKTLDDWEAKFKS--KYGVVGKLLD 248
BLAST of EWM29635.1 vs. NCBI_GenBank
Match: gi|1210512847|dbj|GAX28145.1| (hypothetical protein FisN_6Lh033 [Fistulifera solaris]) HSP 1 Score: 191.815 bits (486), Expect = 3.775e-56 Identity = 113/294 (38.44%), Postives = 163/294 (55.44%), Query Frame = 0
Query: 2 FESFLQTLEAFRQDKTAAAMLAATVAVTV--TVFYWVTKDPPLPKGPGGKAPDEEPEPPRNFTATQLREFTGTKEDD-------PIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDDP-NLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLV--TPPSGLSLTLAEIAQYKG--EEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSD-LTDRQRQTLEEWVEKFINGRKYPVVGKL 280
SF Q+L+ + + + +AV + + V PK + + E EP RNFTA QLR F G EDD P+Y+++ G V+DVS R+FYGP G Y FAG + A + + +E+ LD P + L ++ L W+EK++YY+ YP+VG+L+ P ++ E+A+Y G E P IPEG+A PPIY+AV VFDMSFGG FYGPGGPYH LAG+D +R LA M + + + L ++Q +T+ +W + F + YP+VGKL
Sbjct: 5 LSSFSQSLDQWTGTSGSLGYICIVLAVYIGYHLTTTVMSSSATPKQSTPQHEEGEKEPLRNFTAQQLRHFNGELEDDGPNPQHKPVYLSVAGTVFDVSDGRNFYGPGGPYAAFAGRECGIALSKYAFDEQYLDIPVDRTQLNAGERMELDQWLEKFQYYRNYPLVGKLIFEMPDPHRIISREELAKYNGTLEAP-------IPEGYATPPIYIAVDQDVFDMSFGGVSFYGPGGPYHKLAGRDATRALATMRLDDEMFTTTGKEEPLNEKQSKTMNDWKKTFAERKMYPIVGKL 291 HSP 2 Score: 73.9442 bits (180), Expect = 1.255e-11 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 0
Query: 197 PIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAE-SRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLI 281
P+Y++VAG VFD+S GR FYGPGGPY AG++ L+K +F++ + + + L +R L++W+EKF R YP+VGKLI
Sbjct: 89 PVYLSVAGTVFDVS-DGRNFYGPGGPYAAFAGRECGIALSKYAFDEQYLDIPVDRTQLNAGERMELDQWLEKFQYYRNYPLVGKLI 173
BLAST of EWM29635.1 vs. NCBI_GenBank
Match: gi|1210515217|dbj|GAX25929.1| (hypothetical protein FisN_6Hh033 [Fistulifera solaris]) HSP 1 Score: 187.193 bits (474), Expect = 2.606e-54 Identity = 114/297 (38.38%), Postives = 161/297 (54.21%), Query Frame = 0
Query: 2 FESFLQTLEAFRQDKTAAAMLAATVAVTVTVFYWVTKDPPLPKGPGGKAPDEE---PEPPRNFTATQLREFTGTKED-------DPIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLD-DPNLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLV--TPPSGLSLTLAEIAQYKG--EEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSF-EKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLID 282
SF Q+L+ + + + +AV + + T P P EE EP RNFTA QLR F G ED P+Y+++ G V+DVS RDFYGP G Y FAG + A + + +E+ LD + L ++ L W+EK++YY+ YPV+G+L+ P + E+A+Y G E P IPEG+A PPIY+AV VFDMSFGG FYGPGGPYH LAG+D +R LA M ++ A + L ++Q +T+ +W + F + YP+VGKL +
Sbjct: 5 LSSFSQSLDQWTGTSGSLGYICIVLAVYIGYHFTTTVMSSSSSTPKQSTPQEEQDEKEPLRNFTAQQLRHFNGELEDGVPNPQHKPVYLSVAGTVFDVSDGRDFYGPGGPYATFAGRECGIALSKFAFDEQYLDISVDRTQLNAGERMELDQWLEKFQYYRHYPVMGKLIFDMPDPHRIIRQEELAKYNGTPEAP-------IPEGYATPPIYIAVDQDVFDMSFGGVSFYGPGGPYHKLAGRDATRALATMRLDDEMFAMTGEEEPLNEKQIKTMNDWKKTFTERKMYPIVGKLAE 294
BLAST of EWM29635.1 vs. NCBI_GenBank
Match: gi|223993985|ref|XP_002286676.1| (steroid binding protein 1 [Thalassiosira pseudonana CCMP1335] >gi|220977991|gb|EED96317.1| steroid binding protein 1 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 184.496 bits (467), Expect = 8.122e-54 Identity = 103/235 (43.83%), Postives = 142/235 (60.43%), Query Frame = 0
Query: 57 PPRNFTATQLREFTGTKE-----DDPIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDD-PNLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLV----TPPSGLSLTLAEIAQYKGEEPKEGD-AQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKL 280
P RNFT QLR F GTKE D P+Y++L G V+DVS R FYGP G Y FAG + A A S +E LDD E L K L W+EK+++Y+CYP++G+L+ P ++ E+A++ G+ KEG + +G+ PIY+ KVFD+SFGG YG GPY+ AGKD SR LA MSF+ DA + ++SDL ++Q + L +WV+KF + YP+VG+L
Sbjct: 21 PRRNFTVKQLRHFDGTKEEQLDEDKPVYLSLGGTVFDVSKGRSFYGPGGPYEVFAGRECGAALAKMSFDESLLDDIAACETLGVGDKTELENWLEKFEHYRCYPIMGKLIPDDKLPSPDRVISKEELAKFDGQ--KEGTPTEDELKGYGTYPIYLGAYDKVFDVSFGGVPMYGKDGPYNRFAGKDASRALALMSFDPNDAANPDISDLEEKQVKVLHDWVKKFEENKGYPIVGRL 253 HSP 2 Score: 76.2554 bits (186), Expect = 1.172e-12 Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 0
Query: 197 PIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEK------ADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLI 281
P+Y+++ G VFD+S GR FYGPGGPY AG++ LAKMSF++ A E+ + D T+ LE W+EKF + R YP++GKLI
Sbjct: 46 PVYLSLGGTVFDVS-KGRSFYGPGGPYEVFAGRECGAALAKMSFDESLLDDIAACETLGVGDKTE-----LENWLEKFEHYRCYPIMGKLI 130
BLAST of EWM29635.1 vs. NCBI_GenBank
Match: gi|397627168|gb|EJK68373.1| (hypothetical protein THAOC_10451 [Thalassiosira oceanica]) HSP 1 Score: 182.57 bits (462), Expect = 1.566e-52 Identity = 105/235 (44.68%), Postives = 144/235 (61.28%), Query Frame = 0
Query: 59 RNFTATQLREFTGTK-----EDDPIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDDPN-LEDLTYTQKESLHGWVEKYKYYKCYPVVGRLV----TPPSGLSLTLAEIAQYKG--EEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLI 281
RNFTA QLR F GTK E+ P+Y+++ G V+DVS RDFYGP G Y FAG + A A S +E LD+ ++L K L W EK+++Y+CYP++GRLV PPS + + E++++ G +E +G+ EG+A PI V KVFD SFGG YG GPY+ AGKD SR LA MSF+ D E+ ++SDL +++ L++WV F N + YPVVGKL+
Sbjct: 65 RNFTAKQLRHFDGTKDEKTDEEKPVYLSVSGTVFDVSKGRDFYGP-GPYEQFAGRECGVALATMSFDETLLDNVEACKELGVGDKAELDNWKEKFEHYRCYPIMGRLVPDAKLPPSDRVVAVEELSKFNGLSDEVPKGEY----EGYARMPILVGALDKVFDCSFGGVPMYGKDGPYNKFAGKDVSRALALMSFDPKDIENADISDLEEKKITILKDWVNTFENKKGYPVVGKLV 294
BLAST of EWM29635.1 vs. NCBI_GenBank
Match: gi|635370506|emb|CCI41393.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 176.407 bits (446), Expect = 1.968e-50 Identity = 98/234 (41.88%), Postives = 142/234 (60.68%), Query Frame = 0
Query: 49 KAPDEEPEPPRNFTATQLREFTGTKEDDPIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDDPNLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLVTPPSGLSLTLAEIAQYKGEEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLID 282
K ++E E R ++ +LREF GTK D PIYV L DVYDV+ ++YGP GVY FAG +V+RA A S ++ ++++ +LEDL+ T ++L WV K++ + Y VVGRL+ +LT ++ ++ G IYVA+ GK++D++ G FYGP G Y AGKD SR LA MSF++ + +L DLT+ Q++TL +WV KF +KYPVVG L+D
Sbjct: 54 KVKEDEIER-RYYSKEELREFNGTK-DKPIYVCLLDDVYDVTERAEYYGPGGVYHLFAGREVSRALATMSFDQVEIENDDLEDLSSTTLQTLQEWVIKFRDHNKYLVVGRLLRQQ---NLTKKKLERFNGVNN------------VRKIIYVALCGKIYDVTMDGGSFYGPEGSYKAFAGKDASRALAVMSFDQKYLVNTSLDDLTETQKKTLTDWVNKFT--KKYPVVGNLVD 268
BLAST of EWM29635.1 vs. NCBI_GenBank
Match: gi|673021294|ref|XP_008864608.1| (hypothetical protein H310_02762 [Aphanomyces invadans] >gi|574479539|gb|ETW06533.1| hypothetical protein H310_02762 [Aphanomyces invadans]) HSP 1 Score: 172.555 bits (436), Expect = 3.378e-49 Identity = 100/243 (41.15%), Postives = 138/243 (56.79%), Query Frame = 0
Query: 41 PLPKGPGGKAPDEEPEPP--RNFTATQLREFTGTKEDDPIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDDPNLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLVTPPSGLSLTLAEIAQYKGEEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLI 281
P+ K P + P EPE P R FT +LREF G + D PIY+A++G VYDVS RDFYGP Y FAG + RA A S E DLD+ ++ DL + +KE L WV+K+ Y YP+VGR++ LTL E++ Y P+YVA+ G ++D++ GG YGP G Y AG+D +R LA MSF++ + + LT+ Q +TL +W KF + KY VVGK++
Sbjct: 36 PVSKAPSKEKPTGEPEVPQQRYFTLDELREFNG-EGDKPIYIAIKGVVYDVSRRRDFYGPGEGYHLFAGREAARALAKMSFEPADLDNTDISDLNFMEKEILKDWVDKFTDYNSYPIVGRVLQQK---DLTLDELSAY-----------------TVLPVYVALRGVIYDVTLGGLEHYGPNGGYKMFAGRDATRALALMSFDQENLDHPTEEGLTETQIKTLADWEAKFQS--KYRVVGKVV 255 The following BLAST results are available for this feature:
BLAST of EWM29635.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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