EWM20305.1, cds10369 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20305.1 vs. NCBI_GenBank
Match: gi|585099787|gb|EWM20305.1| (d-isomer specific 2-hydroxyacid dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 248.054 bits (632), Expect = 2.492e-83 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
Query: 1 MPQVLLSPHNMDMTATFLFDSVRFFTENCQRFVKGGALRNLVDKKAGERLWGGGVVRTSEIYMISFISYWTHEVNVLGLESAGVHGIKHLVGLAGDVRRRLSFSVAMSWLSLFDLQFLFP 120
MPQVLLSPHNMDMTATFLFDSVRFFTENCQRFVKGGALRNLVDKKAGERLWGGGVVRTSEIYMISFISYWTHEVNVLGLESAGVHGIKHLVGLAGDVRRRLSFSVAMSWLSLFDLQFLFP
Sbjct: 1 MPQVLLSPHNMDMTATFLFDSVRFFTENCQRFVKGGALRNLVDKKAGERLWGGGVVRTSEIYMISFISYWTHEVNVLGLESAGVHGIKHLVGLAGDVRRRLSFSVAMSWLSLFDLQFLFP 120
BLAST of EWM20305.1 vs. NCBI_GenBank
Match: gi|219114865|ref|XP_002178228.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409963|gb|EEC49893.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 58.151 bits (139), Expect = 1.698e-7 Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = 0
Query: 1 MPQVLLSPHNMDMTATFLFDSVRFFT-ENCQRFVKGGALRNLVDKKAG 47
M VLLSPHNMD TATF+ ++ F+ EN RFV+G L N+VD KAG
Sbjct: 362 MDNVLLSPHNMDQTATFMHEATEFYVEENLPRFVRGQELLNIVDAKAG 409
BLAST of EWM20305.1 vs. NCBI_GenBank
Match: gi|1072226883|gb|OEU11623.1| (2-Hacid_dh_C-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 56.6102 bits (135), Expect = 3.652e-7 Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 0
Query: 3 QVLLSPHNMDMTATFLFDSVRFFT-ENCQRFVKGGALRNLVDKKAG 47
VLLSPHNMD T TF+ +S +FF EN RF+ G L N VDKKAG
Sbjct: 202 NVLLSPHNMDQTDTFMLESTQFFVEENLPRFLHGHPLLNPVDKKAG 247
BLAST of EWM20305.1 vs. NCBI_GenBank
Match: gi|115364348|gb|EAU63432.1| (D-isomer specific 2-hydroxyacid dehydrogenase family protein [Stigmatella aurantiaca DW4/3-1] >gi|309393685|gb|ADO71144.1| D-isomer specific 2-hydroxyacid dehydrogenase domain protein [Stigmatella aurantiaca DW4/3-1]) HSP 1 Score: 53.1434 bits (126), Expect = 6.236e-7 Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0
Query: 1 MPQVLLSPHNMDMTATFLFDSVRFFTENCQRFVKGGALRNLVDKKAG 47
+ VLLSPH D T T+ DSV FF +N +RF +G L NLVDK+AG
Sbjct: 31 LENVLLSPHCADHTPTWREDSVAFFLKNLERFEQGAPLLNLVDKRAG 77
BLAST of EWM20305.1 vs. NCBI_GenBank
Match: gi|1174252582|ref|WP_081465923.1| (hydroxyacid dehydrogenase [Stigmatella aurantiaca]) HSP 1 Score: 53.1434 bits (126), Expect = 6.453e-7 Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0
Query: 1 MPQVLLSPHNMDMTATFLFDSVRFFTENCQRFVKGGALRNLVDKKAG 47
+ VLLSPH D T T+ DSV FF +N +RF +G L NLVDK+AG
Sbjct: 32 LENVLLSPHCADHTPTWREDSVAFFLKNLERFEQGAPLLNLVDKRAG 78 The following BLAST results are available for this feature:
BLAST of EWM20305.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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