EWM20307.1, cds10365 (CDS) Nannochloropsis gaditana

Overview
NameEWM20307.1
Unique Namecds10365
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037279.1:11500..12045 +

Link to JBrowse

Properties
Property NameValue
Start range11500
Start range.
Protein idEWM20307.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101480g2.9900.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037279.1supercontigKK037279.1:11500..12045 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20307.1 vs. NCBI_GenBank
Match: gi|585099791|gb|EWM20307.1| (hypothetical protein Naga_101480g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 355.525 bits (911), Expect = 5.740e-124
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 
Query:    1 SSSLLPSLPPCAVHRGWHRGRGVHGGADGGELEILRHYLRELGVYPGDYGRRDGSLLCSGGVRSVCLREGGREREERLLVLNGGWKRARRKEEGGGEGHEGKEGKVAAQQIGRKGGETSQSSTVPGYFEGELSIQAESFLPCKYIHVILVRNGALNIGIVRIGNEFGAGRESVVNVFRCVN 181
            SSSLLPSLPPCAVHRGWHRGRGVHGGADGGELEILRHYLRELGVYPGDYGRRDGSLLCSGGVRSVCLREGGREREERLLVLNGGWKRARRKEEGGGEGHEGKEGKVAAQQIGRKGGETSQSSTVPGYFEGELSIQAESFLPCKYIHVILVRNGALNIGIVRIGNEFGAGRESVVNVFRCVN
Sbjct:    1 SSSLLPSLPPCAVHRGWHRGRGVHGGADGGELEILRHYLRELGVYPGDYGRRDGSLLCSGGVRSVCLREGGREREERLLVLNGGWKRARRKEEGGGEGHEGKEGKVAAQQIGRKGGETSQSSTVPGYFEGELSIQAESFLPCKYIHVILVRNGALNIGIVRIGNEFGAGRESVVNVFRCVN 181
The following BLAST results are available for this feature:
BLAST of EWM20307.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585099791|gb|EWM20307.1|5.740e-124100.00hypothetical protein Naga_101480g2, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10397rna10397Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications