EWM29649.1, cds1028 (CDS) Nannochloropsis gaditana

Overview
NameEWM29649.1
Unique Namecds1028
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1001393..1001695 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29649.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100050g31.6872.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1001393..1001695 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM29649.1 vs. NCBI_GenBank
Match: gi|585112221|gb|EWM29649.1| (hypothetical protein Naga_100050g31 [Nannochloropsis gaditana] >gi|585112222|gb|EWM29650.1| hypothetical protein Naga_100050g31 [Nannochloropsis gaditana])

HSP 1 Score: 191.43 bits (485), Expect = 1.399e-61
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 
Query:    1 MRKKGQTRGEDASENDEAQALAEIMMPRKHRRAYQVARRGEAKQKEKVEALVTKRRKLEEAAGVAAPRYATSKRRAGARGTTAVGKGGRGAKTGARVSTR 100
            MRKKGQTRGEDASENDEAQALAEIMMPRKHRRAYQVARRGEAKQKEKVEALVTKRRKLEEAAGVAAPRYATSKRRAGARGTTAVGKGGRGAKTGARVSTR
Sbjct:    1 MRKKGQTRGEDASENDEAQALAEIMMPRKHRRAYQVARRGEAKQKEKVEALVTKRRKLEEAAGVAAPRYATSKRRAGARGTTAVGKGGRGAKTGARVSTR 100
The following BLAST results are available for this feature:
BLAST of EWM29649.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112221|gb|EWM29649.1|1.399e-61100.00hypothetical protein Naga_100050g31 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1029rna1029Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications