EWM20416.1, cds10257 (CDS) Nannochloropsis gaditana

Overview
NameEWM20416.1
Unique Namecds10257
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037270.1:2171..2323 -
Alignment locationKK037270.1:1790..1852 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20416.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101490g1.5284.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037270.1supercontigKK037270.1:2171..2323 -
KK037270.1supercontigKK037270.1:1790..1852 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20416.1 vs. NCBI_GenBank
Match: gi|585100008|gb|EWM20416.1| (hypothetical protein Naga_101490g1 [Nannochloropsis gaditana])

HSP 1 Score: 150.984 bits (380), Expect = 1.594e-46
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 
Query:    1 MPVALAEQTFFTPAKLDHQAYSKPRCDGAAPNVQLILTGLKRRVDHYHYSVDCPTCSLPGPEGEEKANRRL 71
            MPVALAEQTFFTPAKLDHQAYSKPRCDGAAPNVQLILTGLKRRVDHYHYSVDCPTCSLPGPEGEEKANRRL
Sbjct:    1 MPVALAEQTFFTPAKLDHQAYSKPRCDGAAPNVQLILTGLKRRVDHYHYSVDCPTCSLPGPEGEEKANRRL 71
The following BLAST results are available for this feature:
BLAST of EWM20416.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100008|gb|EWM20416.1|1.594e-46100.00hypothetical protein Naga_101490g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10288rna10288Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications