EWM29627.1, cds1023 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29627.1 vs. NCBI_GenBank
Match: gi|585112199|gb|EWM29627.1| (HAD-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 468.774 bits (1205), Expect = 2.064e-167 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
Query: 1 MASVAAKQGSRPRWLYLFDLDGTLYSNENGYRDNILKNLWEYMHEHMGIPRSTPAKHIWRPLFDKYHQSFRAFKAQGWIDDSKSGHYWSYIRKDVDKFLVPDPDLDTFLESLPKHCPKYIFTNAREEQAREALACLGVERHFEGIFGSEHMGDHCKPEPEAFEKVLKAIPLTLVEGRDGREGNAAEETGQDGWAGESIVLFEDSFKNLMAAKQLGMKTVLICE 223
MASVAAKQGSRPRWLYLFDLDGTLYSNENGYRDNILKNLWEYMHEHMGIPRSTPAKHIWRPLFDKYHQSFRAFKAQGWIDDSKSGHYWSYIRKDVDKFLVPDPDLDTFLESLPKHCPKYIFTNAREEQAREALACLGVERHFEGIFGSEHMGDHCKPEPEAFEKVLKAIPLTLVEGRDGREGNAAEETGQDGWAGESIVLFEDSFKNLMAAKQLGMKTVLICE
Sbjct: 1 MASVAAKQGSRPRWLYLFDLDGTLYSNENGYRDNILKNLWEYMHEHMGIPRSTPAKHIWRPLFDKYHQSFRAFKAQGWIDDSKSGHYWSYIRKDVDKFLVPDPDLDTFLESLPKHCPKYIFTNAREEQAREALACLGVERHFEGIFGSEHMGDHCKPEPEAFEKVLKAIPLTLVEGRDGREGNAAEETGQDGWAGESIVLFEDSFKNLMAAKQLGMKTVLICE 223
BLAST of EWM29627.1 vs. NCBI_GenBank
Match: gi|1072230539|gb|OEU15272.1| (HAD-like protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 142.51 bits (358), Expect = 5.454e-39 Identity = 81/212 (38.21%), Postives = 117/212 (55.19%), Query Frame = 0
Query: 17 LFDLDGTLYSNENGYRDNILKNLWEYMHEHMG-----IPRSTPAKHIWRPLFDKYHQSFRAFKAQGWIDDSKSGHYWSYIRKDVDKFLVPDPDLDTFLESLPKHCPKYIFTNAREEQAREALACLGVERHFEGIFGSEHM--GDHCKPEPEAFEKVLKAIPLTLVEGRDGREGNAAEETGQDGWAGESIVLFEDSFKNLMAAKQLGMKTVLI 221
LFDLDGTLY + GY + I N++++M E G I A+ +W+P+FDKY+ + RA +G++ DSK +Y +++R+ DK+ V D L FLES P K +FTNA E A E L LGV+ F+ + G++ + G CKP+P+AF KV+ + ++ E + FEDSFKNL A K LG +TV I
Sbjct: 1 LFDLDGTLYDHACGYEEEIHSNIFKFMVEMSGGKFNTITTVDEAQRVWQPMFDKYNLTKRALIGEGYVFDSK--YYDTFVRRGADKYFVKDDQLREFLESFPSEMKKVVFTNAPESSANEILNLLGVDDLFDHVLGTDFLDYGSICKPDPKAFTKVMNYLNVSPSEYH-------------------RVCYFEDSFKNLKAGKNLGFRTVFI 191
BLAST of EWM29627.1 vs. NCBI_GenBank
Match: gi|298712162|emb|CBJ33036.1| (HAD-superfamily hydrolase [Ectocarpus siliculosus]) HSP 1 Score: 142.124 bits (357), Expect = 1.746e-38 Identity = 80/206 (38.83%), Postives = 115/206 (55.83%), Query Frame = 0
Query: 17 LFDLDGTLYSNENGYRDNILKNLWEYMHEHMGIPRSTPAKHIWRPLFDKYHQSFRAFKAQGWIDDSKSGHYWSYIRKDVDKFLV-PDPDLDTFLESLPKHCPKYIFTNAREEQAREALACLGVERHFEGIFGSEHMGDHCKPEPEAFEKVLKAIPLTLVEGRDGREGNAAEETGQDGWAGESIVLFEDSFKNLMAAKQLGMKTVLI 221
LFDLDGTLY +NGY ++ +N+W +M + +GI P K +WRPLF KY+QS + + G + +W+ +R F+ P + + LE LP+ KY+FTN E +A EALA LG+ HF+G+ G++ MG+ CKP+ AFE VL+++ G V+FEDSFKNL+ A LGM TV +
Sbjct: 5 LFDLDGTLYPLDNGYHIHVRQNMWRFMSDKLGIEE--PEK-VWRPLFQKYNQSAKGLRVGGGYEFDLE-DFWTSVRAGAADFIKEAPPGVKSALEKLPQK-DKYVFTNCNEVEAEEALALLGIRHHFKGVIGAKAMGETCKPDKAAFEGVLQSV----------------------GADPAKTVMFEDSFKNLVTATSLGMATVFV 183
BLAST of EWM29627.1 vs. NCBI_GenBank
Match: gi|255074135|ref|XP_002500742.1| (predicted protein [Micromonas commoda] >gi|226516005|gb|ACO62000.1| predicted protein [Micromonas commoda]) HSP 1 Score: 137.887 bits (346), Expect = 8.681e-37 Identity = 81/205 (39.51%), Postives = 111/205 (54.15%), Query Frame = 0
Query: 17 LFDLDGTLYSNENGYRDNILKNLWEYMHEHMGIPRSTPAKHIWRPLFDKYHQSFRAFKAQGWIDDSKSGHYWSYIRKDVDKFLVPDPDLDTFLESLPKHCPKYIFTNAREEQAREALACLGVERHFEGIFGSEHMGDHCKPEPEAFEKVLKAIPLTLVEGRDGREGNAAEETGQDGWAGESIVLFEDSFKNLMAAKQLGMKTVLI 221
LFDLDGTLY ENGY + + + ++E+M + + + AK +W F Y+Q+ R+ + QG + YWS+IR D FL + D L S P C K++FTN E+QA EAL LG+E F+G++G++ MGD CKPE AFE V R E N V FEDS KNL+ AK++G TVL+
Sbjct: 14 LFDLDGTLYPIENGYEEKVRERVFEFMVDELKVSSVEQAKEMWWEHFKVYNQTLRSLR-QGMGFEFDREKYWSHIRGDPADFLQANFDALEMLRSFP-GCKKFVFTNCAEKQAIEALQVLGLEGEFDGVYGADFMGDVCKPERAAFEAVC---------ARAKIEPNGT-------------VFFEDSVKNLVTAKEMGFTTVLV 194
BLAST of EWM29627.1 vs. NCBI_GenBank
Match: gi|1199290019|gb|OUS45120.1| (HAD-superfamily hydrolase, subfamily [Ostreococcus tauri]) HSP 1 Score: 138.272 bits (347), Expect = 7.983e-36 Identity = 84/219 (38.36%), Postives = 110/219 (50.23%), Query Frame = 0
Query: 8 QGSRPR---WLYLFDLDGTLYSNENGYRDNILKNLWEYMHEHMGIPRSTPAKHIWRPLFDKYHQSFRAFKAQGWIDDSKSGHYWSYIRKDVDKFLVPDPDLDTFLESLPKH-CPKYIFTNAREEQAREALACLGVERHFEGIFGSEHMGDHCKPEPEAFEKVLKAIPLTLVEGRDGREGNAAEETGQDGWAGESIVLFEDSFKNLMAAKQL-GMKTVLI 221
+ S PR W Y+FDLDGTLY ENGY ++EYM + +G A+ IWR F K++Q+ RA + G+ D + YW+ R D +FL P + L+++ + +FTN E QAREAL LG+E F+G+FG+ MGD KP AFE+ A D V FEDS KNL AA L GM TVLI
Sbjct: 79 RTSHPRAMAWTYVFDLDGTLYDIENGYERRCRARVYEYMRDALGCESVARAEEIWREHFPKHNQTLRALRRAGY--DVDADAYWARTRGDPSEFLTPRAETRAMLDAIAATGGRRLVFTNCHERQAREALRALGIEDCFDGVFGAGGMGDEAKPSAGAFERFFHA---------------------HDVRDPTRCVFFEDSLKNLRAASSLFGMVTVLI 274
BLAST of EWM29627.1 vs. NCBI_GenBank
Match: gi|693496226|emb|CEG00750.1| (HAD-superfamily hydrolase, subfamily IA, variant 3 [Ostreococcus tauri]) HSP 1 Score: 135.576 bits (340), Expect = 1.190e-35 Identity = 80/210 (38.10%), Postives = 105/210 (50.00%), Query Frame = 0
Query: 14 WLYLFDLDGTLYSNENGYRDNILKNLWEYMHEHMGIPRSTPAKHIWRPLFDKYHQSFRAFKAQGWIDDSKSGHYWSYIRKDVDKFLVPDPDLDTFLESLPKHCP-KYIFTNAREEQAREALACLGVERHFEGIFGSEHMGDHCKPEPEAFEKVLKAIPLTLVEGRDGREGNAAEETGQDGWAGESIVLFEDSFKNLMAAKQL-GMKTVLI 221
W Y+FDLDGTLY NGY ++EYM + +G A+ IWR F K++Q+ RA + G+ D + YW+ R D +FL P + L+++ + +FTN E QAREAL LG+E F+G+FG+ MGD KP AFE+ A D V FEDS KNL AA L GM TVLI
Sbjct: 3 WTYVFDLDGTLYDIGNGYERRCRARVYEYMRDALGCESVARAEEIWREHFPKHNQTLRALRRAGY--DVDADAYWARTRGDPSEFLTPRAETRAMLDAIAATGGRRLVFTNCHERQAREALRALGIEDCFDGVFGAGGMGDEAKPSAGAFERFFHA---------------------HDVRDPTRCVFFEDSLKNLRAASSLFGMVTVLI 189
BLAST of EWM29627.1 vs. NCBI_GenBank
Match: gi|308813752|ref|XP_003084182.1| (HAD-superfamily hydrolase, subfamily (ISS) [Ostreococcus tauri]) HSP 1 Score: 134.806 bits (338), Expect = 1.564e-34 Identity = 82/217 (37.79%), Postives = 109/217 (50.23%), Query Frame = 0
Query: 10 SRPR---WLYLFDLDGTLYSNENGYRDNILKNLWEYMHEHMGIPRSTPAKHIWRPLFDKYHQSFRAFKAQGWIDDSKSGHYWSYIRKDVDKFLVPDPDLDTFLESLPKH-CPKYIFTNAREEQAREALACLGVERHFEGIFGSEHMGDHCKPEPEAFEKVLKAIPLTLVEGRDGREGNAAEETGQDGWAGESIVLFEDSFKNLMAAKQL-GMKTVLI 221
S PR W Y+FDLDGTLY NGY ++EYM + +G A+ IWR F K++Q+ RA + G+ D+ + YW+ R D +FL P + L+++ + +FTN E QAREAL LG+E F+G+FG+ MGD KP AFE+ A D V FEDS +NL AA L GM TVLI
Sbjct: 81 SHPRAMAWTYVFDLDGTLYDIGNGYERRCRARVYEYMRDALGCESVARAEEIWREHFPKHNQTLRALRRAGYDVDADA--YWARTRGDPSEFLTPRAETRAMLDAIAATGGRRLVFTNCHERQAREALRALGIEDCFDGVFGAGGMGDEAKPSAGAFERFFHA---------------------HDVRDPTRCVFFEDSLRNLRAASSLFGMVTVLI 274
BLAST of EWM29627.1 vs. NCBI_GenBank
Match: gi|145355806|ref|XP_001422140.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144582380|gb|ABP00457.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 131.339 bits (329), Expect = 8.569e-34 Identity = 78/210 (37.14%), Postives = 110/210 (52.38%), Query Frame = 0
Query: 16 YLFDLDGTLYSNENGYRDNILKNLWEYMHEHM-GIPRSTPAKHIWRPLFDKYHQSFRAFKAQGWIDDSKSGHYWSYIRKDVDKFLVPDPDLDTFLESLP-KHCPKYIFTNAREEQAREALACLGVERHF-EGIFGSEHMGDHCKPEPEAFEKVLKAIPLTLVEGRDGREGNAAEETGQDGWAGESIVLFEDSFKNLMAAKQL-GMKTVLI 221
Y+FDLDGTLY+ NGY + ++E+M G+ A+ +W F +Y+Q+ RA + G + + YW + R D + L P D+ F+ESLP KY+FTN E QA EAL LG+ F + +FG+ MG+ CKPE EAFEK + + + + V FEDS KNL AAK++ GM TVL+
Sbjct: 18 YVFDLDGTLYAIANGYEAACRRRVYEFMATRCAGVDDVAEARVVWEKWFKRYNQTLRALR-HGAGYEFDAAEYWRFTRGDAREHLAPSADVRAFVESLPGGRENKYVFTNCNETQALEALEALGLRDCFADRVFGAGGMGECCKPEREAFEKFFAFCGVDVADASE-------------------CVFFEDSLKNLRAAKEIFGMTTVLV 207
BLAST of EWM29627.1 vs. NCBI_GenBank
Match: gi|612391424|ref|XP_007511233.1| (unknown [Bathycoccus prasinos] >gi|424513209|emb|CCO66793.1| unknown [Bathycoccus prasinos]) HSP 1 Score: 125.176 bits (313), Expect = 1.808e-31 Identity = 75/236 (31.78%), Postives = 121/236 (51.27%), Query Frame = 0
Query: 4 VAAKQGSRPRWLYLFDLDGTLYSNENGYRDNILKNLWEYMHEHMGIPRSTPAKHIWRPLFDKYHQSFRAFKAQGWIDDSKSGHYWSYIRKDVDKFLVPDPDLDTFLESLPKHCPKYIFTNAREEQAREALACLGVERHFEGIFGSEHMGDHCKPEPEAFEKVLKAIP--LTLVEG--RDGREGNA-------------AEETGQDGWAGESIVLFEDSFKNLMAAK-QLGMKTVLI 221
+ A+ ++ LFDLDG LY ENGY ++E+M +G AK IW+ F K++Q+ ++ + G + K YW + R D + L PD + L + K PK++ TN E +A++AL L + F+ ++G++ MGD CKP EAF KVL+ + + ++G DG + + A E Q+ + + + +FEDS KNL++AK + VLI
Sbjct: 1 MGAQNTTKKVKFALFDLDGCLYPIENGYEHACRARVFEFMVSQLGYETIDKAKTIWKREFTKHNQTLKSLRELGHVRFKKET-YWEFTRGDCSQHLEPDEQVRECLRKMSKSFPKFVLTNCAETEAKQALERLNILDQFDYVYGADFMGDTCKPSKEAFGKVLRDVKRRMKAMDGVRSDGTDDDVHSVDEDDITEEEEANEGIQEPFDDDEVFMFEDSLKNLVSAKDNFNITGVLI 235
BLAST of EWM29627.1 vs. NCBI_GenBank
Match: gi|303290292|ref|XP_003064433.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226454031|gb|EEH51338.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 123.25 bits (308), Expect = 6.848e-30 Identity = 80/238 (33.61%), Postives = 108/238 (45.38%), Query Frame = 0
Query: 19 DLDGTLYSNENGYRDNILKNLWEYMHEHMGIPRSTPAKHIWRPLFDKYHQSFRAFKAQGWIDDSKSGHYWSYIRKDVDKFLVPDPDLDTFLESLPKHC----------------------------------PKYIFTNAREEQAREALACLGVERHFEGIFGSEHMGDH-CKPEPEAFEKVLKAIPLTLVEGRDGREGNAAEETGQDGWAGESIVLFEDSFKNLMAAKQLGMKTVLI 221
DLDGTLY+ ENGY + L+E+M E +G+P A+ +WRP F ++QS +A +A G++ DS YW+Y R D L + D F ESL ++ TN E+Q EALA L + +F+ ++G+ HMGD KP+ EAFE V+ G G FEDS KNL AAK LGM TVL+
Sbjct: 108 DLDGTLYAIENGYELACRERLFEFMVERLGLPSKDAARELWRPHFATHNQSLKALRAAGFVVDSD--EYWAYTRGDASTHLGANDDAIAFFESLMTRRGEEEEEEEEEEEGGGEDAGGVGGDGRRRRMRRIKSSHVLTNCHEKQGAEALAVLRLSGYFDRVYGAGHMGDDLAKPQIEAFELVI----------------------GMAGIDPARTAFFEDSVKNLAAAKTLGMTTVLV 321 The following BLAST results are available for this feature:
BLAST of EWM29627.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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