EWM20450.1, cds10223 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20450.1 vs. NCBI_GenBank
Match: gi|585100077|gb|EWM20450.1| (purple acid phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 315.849 bits (808), Expect = 4.698e-109 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 Query: 1 MASSLAHVILSFLLHVLCLLVGPRALAAPIPSAVGEDAWSFFTIGDWGSGTSNQSAVAATMGAWGKRYNPQFIVALGDNFYENGVDSVDDPLWNTRYCSVYTDPALLDVPWYAILGNHDYYGGYADAQIEGREELAGLPILSLPHALAPACLASF 155 MASSLAHVILSFLLHVLCLLVGPRALAAPIPSAVGEDAWSFFTIGDWGSGTSNQSAVAATMGAWGKRYNPQFIVALGDNFYENGVDSVDDPLWNTRYCSVYTDPALLDVPWYAILGNHDYYGGYADAQIEGREELAGLPILSLPHALAPACLASF Sbjct: 1 MASSLAHVILSFLLHVLCLLVGPRALAAPIPSAVGEDAWSFFTIGDWGSGTSNQSAVAATMGAWGKRYNPQFIVALGDNFYENGVDSVDDPLWNTRYCSVYTDPALLDVPWYAILGNHDYYGGYADAQIEGREELAGLPILSLPHALAPACLASF 155
BLAST of EWM20450.1 vs. NCBI_GenBank
Match: gi|919026800|ref|XP_013397188.1| (PREDICTED: purple acid phosphatase 17-like [Lingula anatina]) HSP 1 Score: 105.145 bits (261), Expect = 1.867e-24 Identity = 47/96 (48.96%), Postives = 65/96 (67.71%), Query Frame = 0 Query: 40 SFFTIGDWGSGTSNQSAVAATMGAWGKRYNPQFIVALGDNFYENGVDSVDDPLWNTRYCSVYTDPALLDVPWYAILGNHDYYGGYADAQIEGREEL 135 SF +GDWG +S+Q+ VA MG W + N +F++ +GDNFY GV S+ DPLWNT Y VY DP+ L++ WYA LGNHD+Y G A Q++ + + Sbjct: 28 SFIVLGDWGYNSSHQAKVAKAMGEWAEANNARFVLTVGDNFYNEGVSSLTDPLWNTLYRDVYVDPS-LNITWYACLGNHDHYWGNAIYQVKAHQTV 122
BLAST of EWM20450.1 vs. NCBI_GenBank
Match: gi|919008411|ref|XP_013388967.1| (PREDICTED: purple acid phosphatase 17-like [Lingula anatina]) HSP 1 Score: 105.531 bits (262), Expect = 2.081e-24 Identity = 47/96 (48.96%), Postives = 65/96 (67.71%), Query Frame = 0 Query: 40 SFFTIGDWGSGTSNQSAVAATMGAWGKRYNPQFIVALGDNFYENGVDSVDDPLWNTRYCSVYTDPALLDVPWYAILGNHDYYGGYADAQIEGREEL 135 SF +GDWG +S+Q+ VA MG W + N +F++ +GDNFY GV S+ DPLWNT Y VY DP+ L++ WYA LGNHD+Y G A Q++ + + Sbjct: 54 SFIVLGDWGYNSSHQAKVAKAMGEWAEANNARFVLTVGDNFYNEGVSSLTDPLWNTLYRDVYVDPS-LNITWYACLGNHDHYWGNAIYQVKAHQTM 148
BLAST of EWM20450.1 vs. NCBI_GenBank
Match: gi|1119415268|ref|WP_072390726.1| (hypothetical protein [Hyphomicrobium sp. CS1GBMeth3]) HSP 1 Score: 102.834 bits (255), Expect = 1.314e-23 Identity = 49/94 (52.13%), Postives = 59/94 (62.77%), Query Frame = 0 Query: 36 EDAWSFFTIGDWGSGTSNQSAVAATMGAWGKRYNPQFIVALGDNFYENGVDSVDDPLWNTRYCSVYTDPALLDVPWYAILGNHDYYGGYADAQI 129 D F IGDWG T Q VA + +R +P+FIV+ GDN YENGV SVDDPLW + +Y DP L+ PWYA+LGNHD+ G DAQI Sbjct: 32 RDGLRFLAIGDWGERTPGQKPVATALAEASRRLDPEFIVSTGDNIYENGVKSVDDPLWVDVFEKIYDDPNLM-RPWYAVLGNHDHRGN-VDAQI 123
BLAST of EWM20450.1 vs. NCBI_GenBank
Match: gi|1085975265|emb|SDT95187.1| (acid phosphatase [Verrucomicrobiaceae bacterium GAS474]) HSP 1 Score: 99.3673 bits (246), Expect = 4.302e-22 Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 0 Query: 25 ALAAPIP-SAVGEDAWSFFTIGDWGSGTS-NQSAVAATMGAWGKRYNPQFIVALGDNFYENGVDSVDDPLWNTRYCSVYTDPALLDVPWYAILGNHDYY 121 A AA P S+ E A+ FF +GDWG G +Q+AVA MG R + + ALGDNFYE+GV S DDP W T + VY P+ L VPWYAILGNHDY+ Sbjct: 27 AFAAEAPVSSPAETAFRFFAVGDWGRGGEPSQAAVALRMGELAAREPVRCVFALGDNFYEDGVASADDPQWQTSFEKVYAAPS-LQVPWYAILGNHDYH 124
BLAST of EWM20450.1 vs. NCBI_GenBank
Match: gi|498092280|ref|WP_010406436.1| (acid phosphatase [Sphingomonas echinoides]) HSP 1 Score: 98.5969 bits (244), Expect = 5.678e-22 Identity = 46/84 (54.76%), Postives = 54/84 (64.29%), Query Frame = 0 Query: 40 SFFTIGDWGS-GTSNQSAVAATMGAWGKRYNPQFIVALGDNFYENGVDSVDDPLWNTRYCSVYTDPALLDVPWYAILGNHDYYG 122 SF +GDWG G +Q VA MG +F+V++GDNFYENGV S DDP W + + VYTDPA L VPWY LGNHDY G Sbjct: 34 SFLVVGDWGRDGAQHQRDVAVQMGKTATTLGSRFVVSVGDNFYENGVQSADDPQWQSSFEKVYTDPA-LQVPWYVALGNHDYRG 116
BLAST of EWM20450.1 vs. NCBI_GenBank
Match: gi|567147570|ref|XP_006415836.1| (hypothetical protein EUTSA_v10008145mg [Eutrema salsugineum] >gi|557093607|gb|ESQ34189.1| hypothetical protein EUTSA_v10008145mg [Eutrema salsugineum]) HSP 1 Score: 97.0561 bits (240), Expect = 9.044e-22 Identity = 53/127 (41.73%), Postives = 75/127 (59.06%), Query Frame = 0 Query: 4 SLAHVILSFLLHVLCLLVGPRALAAPIPSAVGEDAWSFFTIGDWGS-GTSNQSAVAATMGAWGKRYNPQFIVALGDNFYENGVDSVDDPLWNTRYCSVYTDPALLDVPWYAILGNHDYYGGYADAQI 129 SL+ V++S LL + L P + G + SF IGDWG G NQS VA MG G++ + F+V+ GDN Y+NG+ S+DDP + + ++YT P+ L PWY +LGNHDY G +AQ+ Sbjct: 9 SLSIVMISLLLSLAPKLEAELTTVEQAPKSDG--SISFLVIGDWGRRGFYNQSQVALQMGRIGEKMDINFVVSTGDNIYDNGMKSIDDPAFQLSFTNIYTSPS-LQKPWYIVLGNHDYRGD-VEAQL 131
BLAST of EWM20450.1 vs. NCBI_GenBank
Match: gi|1054933276|ref|WP_066689343.1| (hypothetical protein [Sphingomonas hankookensis] >gi|1017128578|gb|KZE17149.1| hypothetical protein AVT10_11900 [Sphingomonas hankookensis]) HSP 1 Score: 97.8265 bits (242), Expect = 1.157e-21 Identity = 55/123 (44.72%), Postives = 69/123 (56.10%), Query Frame = 0 Query: 8 VILSFLLHVLCLLVGPRALAAPIPSAVGEDAWSFFTIGDWGSGTSNQSAVAATMGAWGKRYNPQFIVALGDNFYENGVDSVDDPLWNTRYCSVYTDPALLDVPWYAILGNHDYYGGYADAQIE 130 VIL + +G +L A + +F +GDWG T Q VAA MG F++A+GDNFY +GV SVDDPLW + + VYT PA L VPWYA+LGNHDY G AQI+ Sbjct: 3 VILDRRTLLGGFAIGAASLGVTPSRARSANRATFAVLGDWGRDTPEQHHVAAAMGRTAATAQADFVLAIGDNFYTDGVASVDDPLWQSVFEGVYTHPA-LQVPWYALLGNHDYRGN-PQAQID 123
BLAST of EWM20450.1 vs. NCBI_GenBank
Match: gi|1175956994|gb|OQW76543.1| (hypothetical protein BVN32_08980 [Proteobacteria bacterium ST_bin14]) HSP 1 Score: 97.8265 bits (242), Expect = 1.484e-21 Identity = 53/116 (45.69%), Postives = 70/116 (60.34%), Query Frame = 0 Query: 16 VLCLLVGPRALAAPIPSAVGEDAWSFFTIGDWGS-GTSNQSAVAATMGAWGKRYNPQFIVALGDNFYENGVDSVDDPLWNTRYCSVYTDPALLDVPWYAILGNHDYYGGYADAQIE 130 VL LVG +A A P+ F IGDWG G ++Q VA MG + +F++A+GDNFY++GVDS+ DP W + + VYTDPA L++PW LGNHDY G AQI+ Sbjct: 20 VLAPLVGAQAAAKPL---------DFLVIGDWGRDGAAHQRDVAVQMGKASAARSSRFVLAVGDNFYDDGVDSITDPQWKSSFEDVYTDPA-LNIPWQVALGNHDYRGN-PQAQID 124
BLAST of EWM20450.1 vs. NCBI_GenBank
Match: gi|1117400760|ref|XP_019464432.1| (PREDICTED: purple acid phosphatase 7-like [Lupinus angustifolius]) HSP 1 Score: 97.8265 bits (242), Expect = 1.551e-21 Identity = 63/161 (39.13%), Postives = 85/161 (52.80%), Query Frame = 0 Query: 1 MASSLAHVIL---SFLLHVLCLLVGPR--ALAAPIPSAVGEDAWSFFTIGDWG-SGTSNQSAVAATMGAWGKRYNPQFIVALGDNFYENGVDSVDDPLWNTRYCSVYTDPALLDVPWYAILGNHDYYGGYADAQIEGREELAGLPILSLPHALAPACLASF 155 M S L +L F+ LCLLV P L + + +F IGDWG GT NQS VA MG G+ N F++ +GDNFY++G+ VDDP + + ++YT P+ L PWY++LGNHDY G +AQ+ PIL + CL SF Sbjct: 1 MTSCLKESMLFRVIFITSFLCLLVTPSIAELQRLKHNGKEDQPLNFLVIGDWGRKGTYNQSLVAKQMGILGEEQNIDFVINVGDNFYDDGLTGVDDPAFYESFVNIYTAPS-LQKPWYSVLGNHDYRGD-VEAQLS--------PILREKDSRW-VCLRSF 150 The following BLAST results are available for this feature:
BLAST of EWM20450.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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