EWM29631.1, cds1020 (CDS) Nannochloropsis gaditana

Overview
NameEWM29631.1
Unique Namecds1020
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:987336..987900 -
Alignment locationCM002456.1:986543..987078 -
Alignment locationCM002456.1:986300..986408 -
Alignment locationCM002456.1:985980..986242 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29631.1
Productsilencing group b protein
Orig transcript idgnl|cribi|Naga_100050g40.6854.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:987336..987900 -
CM002456.1supercontigCM002456.1:986543..987078 -
CM002456.1supercontigCM002456.1:986300..986408 -
CM002456.1supercontigCM002456.1:985980..986242 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008080N-acetyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR000182GNAT_dom
IPR016181Acyl_CoA_acyltransferase
Homology
BLAST of EWM29631.1 vs. NCBI_GenBank
Match: gi|585112203|gb|EWM29631.1| (silencing group b protein [Nannochloropsis gaditana])

HSP 1 Score: 1002.28 bits (2590), Expect = 0.000e+0
Identity = 490/490 (100.00%), Postives = 490/490 (100.00%), Query Frame = 0
Query:    1 MLGPSLMRRELSANLLFLYLLRTSAAVVTPPERPAWARGYVAFHKDRSGMKASATASAAAGNAAHDQGHFFTRSSPFGRVDGSSAGRSSPSKRDPCGSNAGNHVSSLSKTSHSIRTSASAKASLYAGNTLEVAPPQVCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAERQTPARAGAYPGRKTGHVSSLAVLDDFRRLGIARELMEILHVQMKFRYGVDCSTLHVRCSNRGAQKLYLNSLGYRVVETVQKYYQDGADAYYMKLNFRPSADQHPDERWQEEGEEGREVQEALVGSNGRRGRVKGPGSGGSGVIGSGFSVREEETAPLTQDSRGYFHLSPGPSRRGGVEGGAAAMTPAFRPGGSGGRRGKLAGGRQSECLRGWNNRALIQAYPGSERPERESERFQGCQTEPPRTRRMGRGRRILQPALGRDGSGGRERGNFKRSTNARKDPLPCERRGTWDVECDGGHRQDGVVGVQ 490
            MLGPSLMRRELSANLLFLYLLRTSAAVVTPPERPAWARGYVAFHKDRSGMKASATASAAAGNAAHDQGHFFTRSSPFGRVDGSSAGRSSPSKRDPCGSNAGNHVSSLSKTSHSIRTSASAKASLYAGNTLEVAPPQVCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAERQTPARAGAYPGRKTGHVSSLAVLDDFRRLGIARELMEILHVQMKFRYGVDCSTLHVRCSNRGAQKLYLNSLGYRVVETVQKYYQDGADAYYMKLNFRPSADQHPDERWQEEGEEGREVQEALVGSNGRRGRVKGPGSGGSGVIGSGFSVREEETAPLTQDSRGYFHLSPGPSRRGGVEGGAAAMTPAFRPGGSGGRRGKLAGGRQSECLRGWNNRALIQAYPGSERPERESERFQGCQTEPPRTRRMGRGRRILQPALGRDGSGGRERGNFKRSTNARKDPLPCERRGTWDVECDGGHRQDGVVGVQ
Sbjct:    1 MLGPSLMRRELSANLLFLYLLRTSAAVVTPPERPAWARGYVAFHKDRSGMKASATASAAAGNAAHDQGHFFTRSSPFGRVDGSSAGRSSPSKRDPCGSNAGNHVSSLSKTSHSIRTSASAKASLYAGNTLEVAPPQVCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAERQTPARAGAYPGRKTGHVSSLAVLDDFRRLGIARELMEILHVQMKFRYGVDCSTLHVRCSNRGAQKLYLNSLGYRVVETVQKYYQDGADAYYMKLNFRPSADQHPDERWQEEGEEGREVQEALVGSNGRRGRVKGPGSGGSGVIGSGFSVREEETAPLTQDSRGYFHLSPGPSRRGGVEGGAAAMTPAFRPGGSGGRRGKLAGGRQSECLRGWNNRALIQAYPGSERPERESERFQGCQTEPPRTRRMGRGRRILQPALGRDGSGGRERGNFKRSTNARKDPLPCERRGTWDVECDGGHRQDGVVGVQ 490          
BLAST of EWM29631.1 vs. NCBI_GenBank
Match: gi|553193234|ref|XP_005855738.1| (n-acetyltransferase subunit, partial [Nannochloropsis gaditana CCMP526] >gi|422293320|gb|EKU20620.1| n-acetyltransferase subunit, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 385.956 bits (990), Expect = 2.128e-130
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
Query:    1 MLGPSLMRRELSANLLFLYLLRTSAAVVTPPERPAWARGYVAFHKDRSGMKASATASAAAGNAAHDQGHFFTRSSPFGRVDGSSAGRSSPSKRDPCGSNAGNHVSSLSKTSHSIRTSASAKASLYAGNTLEVAPPQVCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAERQTPAR 188
            MLGPSLMRRELSANLLFLYLLRTSAAVVTPPERPAWARGYVAFHKDRSGMKASATASAAAGNAAHDQGHFFTRSSPFGRVDGSSAGRSSPSKRDPCGSNAGNHVSSLSKTSHSIRTSASAKASLYAGNTLEVAPPQVCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAERQTPAR
Sbjct:    1 MLGPSLMRRELSANLLFLYLLRTSAAVVTPPERPAWARGYVAFHKDRSGMKASATASAAAGNAAHDQGHFFTRSSPFGRVDGSSAGRSSPSKRDPCGSNAGNHVSSLSKTSHSIRTSASAKASLYAGNTLEVAPPQVCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAERQTPAR 188          
BLAST of EWM29631.1 vs. NCBI_GenBank
Match: gi|224009141|ref|XP_002293529.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220970929|gb|EED89265.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 139.813 bits (351), Expect = 5.601e-36
Identity = 69/143 (48.25%), Postives = 84/143 (58.74%), Query Frame = 0
Query:  137 VCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAERQTPARAGAYPGRKTGHVSSLAVLDDFRRLGIARELMEILHVQMKFRYGVDCSTLHVRCSNRGAQKLYLNSLGYRVVETVQKYYQDGADAYYMKLNF 279
            +  R AR+ DIP I+  NL TLPENY N FY NH+ +WP L LVAE       G    R  GHV+SLAV    RRLGIA  L+  LH  +   Y  +   LHVR SN  A KLY+  LGY V + +  YY DG DAY+M+ +F
Sbjct:    1 ITFRLARKSDIPQIQKVNLATLPENYNNNFYINHMREWPELCLVAEHIVGYVLGKVETRPLGHVTSLAVHSHARRLGIASSLLHQLHFHLNSCYNANSVGLHVRISNSAAVKLYIEHLGYDVADIIPMYYGDGEDAYFMRKDF 143          
BLAST of EWM29631.1 vs. NCBI_GenBank
Match: gi|676391387|ref|XP_009038971.1| (putative N-acetyltransferase activity [Aureococcus anophagefferens] >gi|323450515|gb|EGB06396.1| putative N-acetyltransferase activity [Aureococcus anophagefferens])

HSP 1 Score: 130.568 bits (327), Expect = 6.660e-32
Identity = 76/159 (47.80%), Postives = 94/159 (59.12%), Query Frame = 0
Query:  137 VCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVA---------------ERQTPARAGAYPGRKT-GHVSSLAVLDDFRRLGIARELMEILHVQMKFRYGVDCSTLHVRCSNRGAQKLYLNSLGYRVVETVQKYYQDGADAYYMKLNF 279
            +CIR AR +DIP I+ CN  +LPENY ++FY  HL  W +LA VA               ER T   AG    R T GH++SLAV D FRR G+A++LM  +H +M+    V  S LHVRCSN GA +LY  SLGY VV+ VQ YY DG  AY M  + 
Sbjct:    1 MCIRRARADDIPQIQVCNRASLPENYNDSFYARHLADWGHLAFVADADREVVGYVLGRVNERHTETPAGPGSTRPTEGHITSLAVSDRFRRRGVAKQLMVAVHDEMEKL--VQTSKLHVRCSNAGALQLY-ASLGYAVVDVVQGYYHDGEAAYLMAADL 156          
BLAST of EWM29631.1 vs. NCBI_GenBank
Match: gi|545707618|ref|XP_005706123.1| (N-acetyltransferase [Galdieria sulphuraria] >gi|452822585|gb|EME29603.1| N-acetyltransferase [Galdieria sulphuraria])

HSP 1 Score: 125.946 bits (315), Expect = 1.503e-30
Identity = 67/152 (44.08%), Postives = 88/152 (57.89%), Query Frame = 0
Query:  136 QVCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAERQTPARAGAYPGRKT-------GHVSSLAVLDDFRRLGIARELMEILHVQMKFRYGVDCSTLHVRCSNRGAQKLYLNSLGYRVVETVQKYYQDGADAYYMKLNFR 280
             V IR A  ED+ A++ CNL  LPENY   +Y  HLL WP L  VAE       G    +         GH++SLAVL  +R+LGIAR+LME  H +M+  +G    +LHVR +N  AQ LY+ SL Y++ +   KYY DG DAY M+  F+
Sbjct:    1 MVNIRRATPEDLFAMQTCNLLCLPENYQFKYYLYHLLSWPQLLFVAENFDKKIVGYVLAKMEEDAVEPHGHITSLAVLRHYRKLGIARKLMEAAHREMQVLFGAVYCSLHVRVTNVAAQHLYMESLSYQIHDVEAKYYADGEDAYDMRCIFK 152          
BLAST of EWM29631.1 vs. NCBI_GenBank
Match: gi|168059517|ref|XP_001781748.1| (predicted protein [Physcomitrella patens] >gi|162666750|gb|EDQ53396.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 125.176 bits (313), Expect = 5.241e-30
Identity = 64/152 (42.11%), Postives = 87/152 (57.24%), Query Frame = 0
Query:  137 VCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAERQTPARAGAYPGRKT-------GHVSSLAVLDDFRRLGIARELMEILHVQMKFRYGVDCSTLHVRCSNRGAQKLYLNSLGYRVVETVQKYYQDGADAYYMKLNFRP 281
            VCIR A  +D+ A+++CNL  LPENY   +Y+ H+L WP L  VAE       G    +         GH++SLAVL   R+LG+A +LM      M+  +G +  +LHVR SNR A  LY  +LGYR+ +   KYY DG DAY M+   +P
Sbjct:    2 VCIRQATVDDLLAMQSCNLMCLPENYQMKYYFYHILSWPQLLYVAEDYNKKIVGYVLAKMEEDAEECHGHITSLAVLRTHRKLGLATKLMTAAQQCMQEVFGAEYVSLHVRKSNRAAFHLYTETLGYRITDVEAKYYADGEDAYDMRKTLKP 153          
BLAST of EWM29631.1 vs. NCBI_GenBank
Match: gi|1035941163|gb|OAY67317.1| (N-alpha-acetyltransferase 10 [Ananas comosus])

HSP 1 Score: 125.946 bits (315), Expect = 6.564e-30
Identity = 68/159 (42.77%), Postives = 89/159 (55.97%), Query Frame = 0
Query:  137 VCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAERQTPARAGAYPGRKT--------GHVSSLAVLDDFRRLGIARELMEILHVQMKFRYGVDCSTLHVRCSNRGAQKLYLNSLGYRVVETVQKYYQDGADAYYMKLNFRPSADQHP 287
            VCIR A  ED+ A++ACNL  LPENY   +Y  H+L WP L  VAE       G    +          GH++SLAVL   R+LG+A +LM      M+  +G D  +LHVR SNR A  LY ++LGY++ +   KYY DG DAY M+ + R    Q P
Sbjct:    2 VCIRQATVEDLLAMQACNLMCLPENYQMKYYLYHILSWPQLLFVAEDYGSKIVGYVLAKMEEDASEPCHGHITSLAVLRTHRKLGLATKLMTAAQNAMESVFGADYVSLHVRRSNRAAINLYTSTLGYKIHDVEAKYYADGEDAYDMRKHLRGRQLQQP 160          
BLAST of EWM29631.1 vs. NCBI_GenBank
Match: gi|1147622600|ref|XP_020079681.1| (N-alpha-acetyltransferase daf-31-like [Ananas comosus])

HSP 1 Score: 125.561 bits (314), Expect = 9.407e-30
Identity = 68/159 (42.77%), Postives = 88/159 (55.35%), Query Frame = 0
Query:  137 VCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAERQTPARAGAYPGRKT--------GHVSSLAVLDDFRRLGIARELMEILHVQMKFRYGVDCSTLHVRCSNRGAQKLYLNSLGYRVVETVQKYYQDGADAYYMKLNFRPSADQHP 287
            VCIR A  ED+ A++ACNL  LPENY   +Y  H+L WP L  VAE       G    +          GH++SLAVL   R+LG+A +LM      M+  +G D  +LHVR SNR A  LY ++LGY++ +   KYY DG DAY M+   R    Q P
Sbjct:    2 VCIRQATVEDLLAMQACNLMCLPENYQMKYYLYHILSWPQLLFVAEDYGSKIVGYVLAKMEEDASEPCHGHITSLAVLRTHRKLGLATKLMTAAQNAMESVFGADYVSLHVRRSNRAAINLYTSTLGYKIHDVEAKYYADGEDAYDMRKQLRGRQLQQP 160          
BLAST of EWM29631.1 vs. NCBI_GenBank
Match: gi|597998489|ref|XP_007334014.1| (hypothetical protein AGABI1DRAFT_80054 [Agaricus bisporus var. burnettii JB137-S8] >gi|409074926|gb|EKM75313.1| hypothetical protein AGABI1DRAFT_80054 [Agaricus bisporus var. burnettii JB137-S8])

HSP 1 Score: 123.635 bits (309), Expect = 1.074e-29
Identity = 66/160 (41.25%), Postives = 92/160 (57.50%), Query Frame = 0
Query:  139 IRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAERQTPARAGAY------------PGRKTGHVSSLAVLDDFRRLGIARELMEILHVQMKFRYGVDCSTLHVRCSNRGAQKLYLNSLGYRVVETVQKYYQDGADAYYMKLNFRPSADQH 286
            +R AR ED+  ++A NL+ LPENY   F+  HL+ WP L+ VAE       G               G   GHV+S++VL ++RRLGIAR++M +    M+  YG    +LHVR SN+ A  LY  +LG+ V +  +KYY DG DA YM+L F P  +Q+
Sbjct:    3 VRLARAEDLIGMQASNLQNLPENYTMRFWIYHLMSWPQLSYVAEDHKGRIVGYVLSKIDEPDEDNPEGETHGHVNSISVLREYRRLGIARKMMLLSQDAMEKIYGAAYCSLHVRKSNKAAIALYKETLGFEVAKVEKKYYGDGEDALYMRLYFDPEENQN 162          
BLAST of EWM29631.1 vs. NCBI_GenBank
Match: gi|545375208|ref|XP_005651809.1| (acyl-CoA N-acyltransferase [Coccomyxa subellipsoidea C-169] >gi|384253791|gb|EIE27265.1| acyl-CoA N-acyltransferase [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 124.79 bits (312), Expect = 1.243e-29
Identity = 73/196 (37.24%), Postives = 101/196 (51.53%), Query Frame = 0
Query:  137 VCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAER-------QTPARAGAYPGRKTGHVSSLAVLDDFRRLGIARELMEILHVQMKFRYGVDCSTLHVRCSNRGAQKLYLNSLGYRVVETVQKYYQDGADAYYMKLNFRPSADQHPDERWQEEGEEGREVQEALVGSNGRRGRVK---GPGSGG 322
            VCIR+A  ED+ A++ CNL  LPENY   +Y+ H+L WP L  VAE           A+         GH++SLAV    R+LG+A +LME  H  M+  +G   ++LHVR  N+GA  LY  +LGY++ +    YY DG DAY M+   +PS+                    AL  +NG  G+ K   G  +GG
Sbjct:    2 VCIRSATMEDLLAMQRCNLLCLPENYQLKYYFYHILSWPQLLFVAEECNGKIVGYVLAKMEEEAAETHGHITSLAVARTHRKLGVATKLMEAAHRAMEEVFGSVYASLHVRVMNKGAFHLYTQTLGYQIHDREPHYYADGEDAYDMRKYLKPSS--------------------ALAAANGTSGKAKQEDGKQAGG 177          
The following BLAST results are available for this feature:
BLAST of EWM29631.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112203|gb|EWM29631.1|0.000e+0100.00silencing group b protein [Nannochloropsis gaditan... [more]
gi|553193234|ref|XP_005855738.1|2.128e-130100.00n-acetyltransferase subunit, partial [Nannochlorop... [more]
gi|224009141|ref|XP_002293529.1|5.601e-3648.25predicted protein, partial [Thalassiosira pseudona... [more]
gi|676391387|ref|XP_009038971.1|6.660e-3247.80putative N-acetyltransferase activity [Aureococcus... [more]
gi|545707618|ref|XP_005706123.1|1.503e-3044.08N-acetyltransferase [Galdieria sulphuraria] >gi|45... [more]
gi|168059517|ref|XP_001781748.1|5.241e-3042.11predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|1035941163|gb|OAY67317.1|6.564e-3042.77N-alpha-acetyltransferase 10 [Ananas comosus][more]
gi|1147622600|ref|XP_020079681.1|9.407e-3042.77N-alpha-acetyltransferase daf-31-like [Ananas como... [more]
gi|597998489|ref|XP_007334014.1|1.074e-2941.25hypothetical protein AGABI1DRAFT_80054 [Agaricus b... [more]
gi|545375208|ref|XP_005651809.1|1.243e-2937.24acyl-CoA N-acyltransferase [Coccomyxa subellipsoid... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1021rna1021Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications