EWM20479.1, cds10194 (CDS) Nannochloropsis gaditana

Overview
NameEWM20479.1
Unique Namecds10194
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037266.1:55645..56166 +

Link to JBrowse

Properties
Property NameValue
Start range55645
Start range.
Protein idEWM20479.1
Productpotassium sodium efflux p-type atpase
Partialtrue
Orig transcript idgnl|cribi|Naga_102662g1.545.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037266.1supercontigKK037266.1:55645..56166 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR023299ATPase_P-typ_cyto_domN
Homology
BLAST of EWM20479.1 vs. NCBI_GenBank
Match: gi|585100134|gb|EWM20479.1| (potassium sodium efflux p-type atpase, partial [Nannochloropsis gaditana])

HSP 1 Score: 343.584 bits (880), Expect = 1.881e-119
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query:    1 PSLPPFLPQEVALTVLARKGGLPPKEQASSLPSSPRFVAELPFDSVLKRMSVVYGYPSAGSSPSTLRVMTKGAFESVWGISTSIRGKDGKKKKKADDDEHLSEWDLKFWQSQVEHLAGKGLRVLAFAERIVEDEGEGGGEGGGRARTGRTGSGGRRRWSSWASWACSTPLGPR 173
            PSLPPFLPQEVALTVLARKGGLPPKEQASSLPSSPRFVAELPFDSVLKRMSVVYGYPSAGSSPSTLRVMTKGAFESVWGISTSIRGKDGKKKKKADDDEHLSEWDLKFWQSQVEHLAGKGLRVLAFAERIVEDEGEGGGEGGGRARTGRTGSGGRRRWSSWASWACSTPLGPR
Sbjct:    1 PSLPPFLPQEVALTVLARKGGLPPKEQASSLPSSPRFVAELPFDSVLKRMSVVYGYPSAGSSPSTLRVMTKGAFESVWGISTSIRGKDGKKKKKADDDEHLSEWDLKFWQSQVEHLAGKGLRVLAFAERIVEDEGEGGGEGGGRARTGRTGSGGRRRWSSWASWACSTPLGPR 173          
BLAST of EWM20479.1 vs. NCBI_GenBank
Match: gi|1050826089|gb|ANZ73913.1| (BA75_01103T0 [Komagataella pastoris])

HSP 1 Score: 69.707 bits (169), Expect = 1.004e-10
Identity = 44/128 (34.38%), Postives = 62/128 (48.44%), Query Frame = 0
Query:    8 PQEVALTVLARKGGLPPKEQASSLPSSP-RFVAELPFDSVLKRMSVVYGYPSAGSSPSTLRVMTKGAFESVWGISTSIRGKDGKKKKKADDDEHLSEWDLKFWQSQVEHLAGKGLRVLAFAERIVEDE 134
            P E+A+ V   + G    + +   P SP   +AE PFDS +KRM+ +Y    +G       + TKGA E V G  T I   DG  +   D+D        K    Q+   + +GLRVL+FA+R  E E
Sbjct:  502 PTEIAIQVFTTRLGYSRDDLSYDSPDSPYEHLAEFPFDSSIKRMTAIYSEKKSGKHT----IYTKGAVERVLGCCTKIYQPDGTTRPLTDEDH-------KNIDEQMNAFSSQGLRVLSFAQRQPEPE 618          
BLAST of EWM20479.1 vs. NCBI_GenBank
Match: gi|672821443|gb|KFH66339.1| (hypothetical protein MVEG_08438 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 68.9366 bits (167), Expect = 1.496e-10
Identity = 44/123 (35.77%), Postives = 66/123 (53.66%), Query Frame = 0
Query:    8 PQEVALTVLARKGGLPPKEQASSLPSSPRFVAELPFDSVLKRMSVVYGYPSAGSSPSTLR-VMTKGAFESVWGISTSIRGKDGKKKKKADDDEHLSEWDLKFWQSQVEHLAGKGLRVLAFAER 129
            P E+AL VLA K GLP  E    + +  + +AE PFDS +KRMSVVY  PS+  + ++   + TKGA E +    +  R  +     K + D+ +          +V+ LA +GLRVL+ + R
Sbjct:  432 PTEIALQVLAYKAGLPKPEL---VENGFQLIAEFPFDSSVKRMSVVYKTPSSSKADTSEHLIFTKGATERILDRCSHYREGNTDIPLKNEKDDSIQADFASIIMERVDALAEQGLRVLSLSYR 551          
BLAST of EWM20479.1 vs. NCBI_GenBank
Match: gi|1183505514|gb|ORZ29062.1| (putative Na P-type ATPase [Lobosporangium transversale])

HSP 1 Score: 68.9366 bits (167), Expect = 1.517e-10
Identity = 49/129 (37.98%), Postives = 63/129 (48.84%), Query Frame = 0
Query:    8 PQEVALTVLARKGGLPPKEQASSLPSSPRFVAELPFDSVLKRMSVVYGYPSAGSSPSTLRVMTKGAFESVWGISTSIRGKDGKKKKKADDDEHLSEWDLKFWQSQVEH----LAGKGLRVLAFAERIVE 132
            P E+AL VLA K G+P  E    L    + +AE PFDS +KRMSV+Y  P          +  KGA E V G  T  R  D +     + +E  S  D K +++ +      LA KGLRVL  A R  E
Sbjct:  434 PTEIALQVLAYKAGVPKPEL---LSQGFKLIAEFPFDSSVKRMSVLYQAPEQQDGTGGHFIFLKGATERVIGCCTRYRNGDNEILLSEESNEKGS-MDRKAFETMITEKLDILADKGLRVLTLAYRRFE 558          
BLAST of EWM20479.1 vs. NCBI_GenBank
Match: gi|126273943|ref|XP_001387351.1| (P-type ATPase involved in Na+ efflux [Scheffersomyces stipitis CBS 6054] >gi|126213221|gb|EAZ63328.1| P-type ATPase involved in Na+ efflux [Scheffersomyces stipitis CBS 6054])

HSP 1 Score: 68.9366 bits (167), Expect = 1.700e-10
Identity = 41/99 (41.41%), Postives = 56/99 (56.57%), Query Frame = 0
Query:   38 VAELPFDSVLKRMSVVYGYPSAGSSPSTLRVMTKGAFESVWGISTSIRGKDGKKKKKADDDEH--LSEWDLKFWQSQVEHLAGKGLRVLAFAERIVEDE 134
            + E PFDS +KRMS VY +  +G     +RV +KGA E + GI T   G D    K  D  E   L+E D +  +  +  L+ +GLRVLAFA + VED+
Sbjct:  528 INEFPFDSSIKRMSAVYKHIESGE----IRVYSKGAVERLLGICTQWYGHDDDSDKLYDSQEPIPLTESDKELIEENMAALSSQGLRVLAFATKKVEDK 622          
BLAST of EWM20479.1 vs. NCBI_GenBank
Match: gi|672829189|gb|KFH74078.1| (hypothetical protein MVEG_01291 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 68.9366 bits (167), Expect = 1.837e-10
Identity = 46/127 (36.22%), Postives = 63/127 (49.61%), Query Frame = 0
Query:    8 PQEVALTVLARKGGLPPKEQASSLPSSPRFVAELPFDSVLKRMSVVYGYPSAGSSPSTLRVMTKGAFESVWGISTSIRGKDGKKKKKADDDEHLSEWDLKFWQSQVEHLAGKGLRVLAFAERIVEDE 134
            P E+AL VLA K GL    +   +    + VAE PFDS +KRMSV+Y  P     P    +  KGA E V G  T  R  D ++  + +    L  ++      +++ LA KGLRVL  A R  E +
Sbjct:  433 PTEIALQVLAYKAGLA---KPDLIEQGFKLVAEFPFDSSVKRMSVLYQGPDTEEGPGDHFIFLKGATERVIGCCTHWRDGDIERSLQGEKGTELETFE-DMVTEKMDALAEKGLRVLTLAYRRFEPQ 555          
BLAST of EWM20479.1 vs. NCBI_GenBank
Match: gi|630959582|ref|XP_007876199.1| (hypothetical protein PFL1_00514 [Anthracocystis flocculosa PF-1] >gi|521588784|gb|EPQ32318.1| hypothetical protein PFL1_00514 [Anthracocystis flocculosa PF-1])

HSP 1 Score: 68.9366 bits (167), Expect = 1.875e-10
Identity = 49/124 (39.52%), Postives = 65/124 (52.42%), Query Frame = 0
Query:    8 PQEVALTVLARKGGLPPKEQASSLPSSPRFV--AELPFDSVLKRMSVVYGYPSAGSSPSTLRVMTKGAFESVWGISTSIRGKDGKKKKKADDDEHLSEWDLKFWQSQVEHLAGKGLRVLAFAER 129
            P E+AL V A K GL     + ++  +PRF   AE PFDS +KRM+ VY  P+         +  KGA E V    TS+R  +G   ++A     L +   K     +E LA +GLRVLAFAER
Sbjct:  605 PTEIALQVFATKLGL--GRDSLTIGEAPRFSHEAEFPFDSTVKRMTSVYKVPAQDGDR---ELYMKGAVERVLECCTSVRTTEGADGQEA----ALDDATRKSIVDHMEKLASEGLRVLAFAER 719          
BLAST of EWM20479.1 vs. NCBI_GenBank
Match: gi|254565953|ref|XP_002490087.1| (P-type ATPase sodium pump, involved in Na+ and Li+ efflux to allow salt tolerance [Komagataella phaffii GS115] >gi|238029883|emb|CAY67806.1| P-type ATPase sodium pump, involved in Na+ and Li+ efflux to allow salt tolerance [Komagataella phaffii GS115] >gi|328350489|emb|CCA36889.1| P-type ATPase sodium pump [Komagataella phaffii CBS 7435] >gi|1051423684|gb|AOA61510.1| GQ67_02218T0 [Komagataella phaffii] >gi|1051430155|gb|AOA66182.1| GQ68_02232T0 [Komagataella phaffii GS115])

HSP 1 Score: 68.1662 bits (165), Expect = 2.937e-10
Identity = 43/128 (33.59%), Postives = 62/128 (48.44%), Query Frame = 0
Query:    8 PQEVALTVLARKGGLPPKEQASSLPSSP-RFVAELPFDSVLKRMSVVYGYPSAGSSPSTLRVMTKGAFESVWGISTSIRGKDGKKKKKADDDEHLSEWDLKFWQSQVEHLAGKGLRVLAFAERIVEDE 134
            P E+A+ V   + G    + +   P SP   +AE PFDS +KRM+ +Y    +G       + TKGA E V G    I   DG  +   D+D        K  + Q+   + +GLRVL+FA+R  E E
Sbjct:  502 PTEIAIQVFTTRLGYSRDDLSYDSPDSPYEHLAEFPFDSSIKRMTAIYSERKSGKHT----IYTKGAVERVLGCCNKIYQTDGTTRPLTDEDH-------KNIEEQMNAFSSQGLRVLSFAQRHPEPE 618          
BLAST of EWM20479.1 vs. NCBI_GenBank
Match: gi|294655618|ref|XP_457790.2| (DEHA2C02552p [Debaryomyces hansenii CBS767] >gi|199430470|emb|CAG85830.2| DEHA2C02552p [Debaryomyces hansenii CBS767])

HSP 1 Score: 67.781 bits (164), Expect = 3.873e-10
Identity = 45/127 (35.43%), Postives = 69/127 (54.33%), Query Frame = 0
Query:   10 EVALTVLARKGGLPPKEQASSLPSSPRFVAELPFDSVLKRMSVVYGYPSAGSSPSTLRVMTKGAFESVWGISTSIRGKDGKKKKKADDDEHLSEWDLKFWQSQVEHLAGKGLRVLAFAERIVEDEGE 136
            E+A+ V   + GL  K+    +  + + +AE PFDS +KRMSV+Y      ++ ++  + TKGA E V    +   G DGK     +D   L+E D    +S +  L+ +GLRVLAFA+R +  E E
Sbjct:  508 EIAINVFTTRLGLSRKQM---VEGNLKHIAEFPFDSSIKRMSVIYQ-----NNQNSSFIYTKGAVERVLDCCSYWYGMDGK-----EDMSPLTEADKSIIESNMNALSSEGLRVLAFAQRSINIEKE 621          
BLAST of EWM20479.1 vs. NCBI_GenBank
Match: gi|190319367|gb|AAK28385.2| (ATPase ENA1p [Debaryomyces hansenii])

HSP 1 Score: 67.781 bits (164), Expect = 4.304e-10
Identity = 45/127 (35.43%), Postives = 68/127 (53.54%), Query Frame = 0
Query:   10 EVALTVLARKGGLPPKEQASSLPSSPRFVAELPFDSVLKRMSVVYGYPSAGSSPSTLRVMTKGAFESVWGISTSIRGKDGKKKKKADDDEHLSEWDLKFWQSQVEHLAGKGLRVLAFAERIVEDEGE 136
            E+A+ V   + GL  K+       + + +AE PFDS +KRMSV+Y      ++ ++  + TKGA E V    +   G DGK     +D   L+E D    +S +  L+ +GLRVLAFA+R +  E E
Sbjct:  508 EIAINVFTTRLGLSRKQMVEG---NLKHIAEFPFDSSIKRMSVIYQ-----NNQNSSFIYTKGAVERVLDCCSYWYGMDGK-----EDMSPLTEADKSIIESNMNALSSEGLRVLAFAQRSINIEKE 621          
The following BLAST results are available for this feature:
BLAST of EWM20479.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100134|gb|EWM20479.1|1.881e-119100.00potassium sodium efflux p-type atpase, partial [Na... [more]
gi|1050826089|gb|ANZ73913.1|1.004e-1034.38BA75_01103T0 [Komagataella pastoris][more]
gi|672821443|gb|KFH66339.1|1.496e-1035.77hypothetical protein MVEG_08438 [Mortierella verti... [more]
gi|1183505514|gb|ORZ29062.1|1.517e-1037.98putative Na P-type ATPase [Lobosporangium transver... [more]
gi|126273943|ref|XP_001387351.1|1.700e-1041.41P-type ATPase involved in Na+ efflux [Scheffersomy... [more]
gi|672829189|gb|KFH74078.1|1.837e-1036.22hypothetical protein MVEG_01291 [Mortierella verti... [more]
gi|630959582|ref|XP_007876199.1|1.875e-1039.52hypothetical protein PFL1_00514 [Anthracocystis fl... [more]
gi|254565953|ref|XP_002490087.1|2.937e-1033.59P-type ATPase sodium pump, involved in Na+ and Li+... [more]
gi|294655618|ref|XP_457790.2|3.873e-1035.43DEHA2C02552p [Debaryomyces hansenii CBS767] >gi|19... [more]
gi|190319367|gb|AAK28385.2|4.304e-1035.43ATPase ENA1p [Debaryomyces hansenii][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10225rna10225Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications