EWM20491.1, cds10184 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20491.1 vs. NCBI_GenBank
Match: gi|585100154|gb|EWM20491.1| (hypothetical protein Naga_100382g3 [Nannochloropsis gaditana]) HSP 1 Score: 1704.88 bits (4414), Expect = 0.000e+0 Identity = 827/827 (100.00%), Postives = 827/827 (100.00%), Query Frame = 0 Query: 1 METQALEEELLTKGQTSGASASEEEEGDGKGQSLLGTILERVDRPRMAEQFLDAFHAVQRRGKIHREGMVGMLRHWKKLSDLAGEDLTLGIGAAIANALKVEAWELQYRGGDTVKRSESWTGDSSLGIIHTPNSFQGRLSSKRFPTTVEEGPMGLLLEEELAAVEAGAARLKASPLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLEPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPERGRRRDGVPRRERLLYSEFLKIFSRDGHVRLYWARLAQLEVSMREGEEEKMHFLLWMEPVPASRYITDRPEKTTQSKTTLFRQRPSAETGSLSREAREVCASVGEGEELGWRPLKLQDFSETEEKGDGASSGCGERQQVALQKRSPPSLFFPALASVPLPPGTSLPSLPSSWTVNTDQTRAGPPPGFLSPSGFPTPPFLFRSYSPSHPSSRYPLDSPAFPISSTLPDMFEIKSDFIKGLLPADPKTGLAGKSHGESTVTNPVVDVKCKHITKREMQRKKSKISCARNEGKAQGVFQVTAEPKHSPKHHKEQQQQERQLQQQQQQQQQEQQNHHQQQPGLPQQQHMSVFPISRSSQYLPSSIDMKGEMEQQYQRHPSIFFHTYQDPCWGVKDHQVFRQTHQGHDLNVDASILPPVAMLNEQQLDKQQKQLILRLFSHAHREHHYKQHKQHTTYIENHEACYLPLDGRERRHNADENEDLRGAYRHWDIHSEEIYDDHLQPYLQRQLQQHEQEHGWSTSCWPPSTPWQGGQSQPIQQGEHGHSPSPIPHSTTKVGTGLFLLSMAAAQRK 827 METQALEEELLTKGQTSGASASEEEEGDGKGQSLLGTILERVDRPRMAEQFLDAFHAVQRRGKIHREGMVGMLRHWKKLSDLAGEDLTLGIGAAIANALKVEAWELQYRGGDTVKRSESWTGDSSLGIIHTPNSFQGRLSSKRFPTTVEEGPMGLLLEEELAAVEAGAARLKASPLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLEPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPERGRRRDGVPRRERLLYSEFLKIFSRDGHVRLYWARLAQLEVSMREGEEEKMHFLLWMEPVPASRYITDRPEKTTQSKTTLFRQRPSAETGSLSREAREVCASVGEGEELGWRPLKLQDFSETEEKGDGASSGCGERQQVALQKRSPPSLFFPALASVPLPPGTSLPSLPSSWTVNTDQTRAGPPPGFLSPSGFPTPPFLFRSYSPSHPSSRYPLDSPAFPISSTLPDMFEIKSDFIKGLLPADPKTGLAGKSHGESTVTNPVVDVKCKHITKREMQRKKSKISCARNEGKAQGVFQVTAEPKHSPKHHKEQQQQERQLQQQQQQQQQEQQNHHQQQPGLPQQQHMSVFPISRSSQYLPSSIDMKGEMEQQYQRHPSIFFHTYQDPCWGVKDHQVFRQTHQGHDLNVDASILPPVAMLNEQQLDKQQKQLILRLFSHAHREHHYKQHKQHTTYIENHEACYLPLDGRERRHNADENEDLRGAYRHWDIHSEEIYDDHLQPYLQRQLQQHEQEHGWSTSCWPPSTPWQGGQSQPIQQGEHGHSPSPIPHSTTKVGTGLFLLSMAAAQRK Sbjct: 1 METQALEEELLTKGQTSGASASEEEEGDGKGQSLLGTILERVDRPRMAEQFLDAFHAVQRRGKIHREGMVGMLRHWKKLSDLAGEDLTLGIGAAIANALKVEAWELQYRGGDTVKRSESWTGDSSLGIIHTPNSFQGRLSSKRFPTTVEEGPMGLLLEEELAAVEAGAARLKASPLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLEPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPERGRRRDGVPRRERLLYSEFLKIFSRDGHVRLYWARLAQLEVSMREGEEEKMHFLLWMEPVPASRYITDRPEKTTQSKTTLFRQRPSAETGSLSREAREVCASVGEGEELGWRPLKLQDFSETEEKGDGASSGCGERQQVALQKRSPPSLFFPALASVPLPPGTSLPSLPSSWTVNTDQTRAGPPPGFLSPSGFPTPPFLFRSYSPSHPSSRYPLDSPAFPISSTLPDMFEIKSDFIKGLLPADPKTGLAGKSHGESTVTNPVVDVKCKHITKREMQRKKSKISCARNEGKAQGVFQVTAEPKHSPKHHKEQQQQERQLQQQQQQQQQEQQNHHQQQPGLPQQQHMSVFPISRSSQYLPSSIDMKGEMEQQYQRHPSIFFHTYQDPCWGVKDHQVFRQTHQGHDLNVDASILPPVAMLNEQQLDKQQKQLILRLFSHAHREHHYKQHKQHTTYIENHEACYLPLDGRERRHNADENEDLRGAYRHWDIHSEEIYDDHLQPYLQRQLQQHEQEHGWSTSCWPPSTPWQGGQSQPIQQGEHGHSPSPIPHSTTKVGTGLFLLSMAAAQRK 827
BLAST of EWM20491.1 vs. NCBI_GenBank
Match: gi|585104545|gb|EWM23477.1| (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 896.73 bits (2316), Expect = 0.000e+0 Identity = 511/830 (61.57%), Postives = 599/830 (72.17%), Query Frame = 0 Query: 1 METQALEEELLTKGQTSGASASEEEEGDGKGQSLLGTILERVDRPRMAEQFLDAFHAVQRRGKIHREGMVGMLRHWKKLSDLAGEDLTLGIGAAIANALKVEAWELQYRGGDTV-KRSESWTGDSSLGIIHTPNSFQGRLSSKRFPTTVEEGPMGLLLEEELAAVEAGAARLKASPLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLEPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPERGRRRDGVPRRERLLYSEFLKIFSRDGHVRLYWARLAQLEVSMREGEEEKMHFLLWMEPVPASRYITDRPEKTTQSKTTLFRQRPSAETGSLSREAREVCASVGEGEELGWRPLKLQDFSETEEKGDGASSGCGERQQVALQKRSPPSLFFPALASVPLPPGTSLPSLPSSWTVNTDQTRAGPPPGFLSPSGFPTPPFLFRSYSPSHPSSRYPLDSPAFPISSTLPDMFEIKSDFIKGLLPADPKTGLAGKSHGESTVTNPVVDVKCKHITKREMQRKK----SKISCARNEGKAQGVFQVTAEPKHSPKHHKEQQQQERQLQQQQQQQQQEQQNHHQQQPGLPQQQHMSVFPISRSSQYLPSSIDMKGEMEQQYQRHPSIFFHTYQDPCWGVKDHQVFRQTHQGHDLNVDASILPPVAMLNEQQLDKQQKQLILRLFSHAHREHHYKQHKQHTTYIENHEACYLPLDGRERRHNADENEDLRGAYRHWDIHSEEIYDDHLQPYLQRQLQQHEQEHGWSTSCWPPSTPWQGGQSQPIQQGEHGHSPSPIPHSTTKVGTGLFLLSMAAAQ 825 M TQ EE K Q S ASAS+EEE DG GQSLL TILERVDR RMAE+FLDAFHAVQRRG +HREGMVGMLRHWKKLSDL+G+DLTLG+GAAIA A VE WEL+YR + V RSES G+ SLG T NS QG+LSSKRF T V+EGP GLLLEE L AVEAGAARLKAS LFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCL+PFLFAAFVAHSDRDTWFRMNLEALCSPRFRPE G R+GVP RERLLYSEFLKIFSRDGHVRLYWARLAQLE + REGEEEK+HFLLWMEPVPASRYITDRPEK T SKT LF++RP + GS S +GE +G RPL+ QD E +KG+G SSGCGERQQVA QK PP L FPALASVPLPPG +LPS PSSWT++TDQ R G SPS F PP SPS P + + DS P++STLP +FEIKS+FI+ LL K+ A K+HG+ TVTN V+D +CK +T ++ R+ SKIS ++ + + + +F+ TA PKH P H++QQ++++Q Q Q++QQQQ+QQ PQ+Q M +FP S+SS LPS + + EMEQQ QRHP +F H +Q C G + F QT+Q +DLNV A +L P AM N+QQL+ EHH Q I NHEA Y G +RR A++ E R +++ D++S+E ++H QP+L+RQ QHE E G S SCWPPSTPWQ QS+P QQ EH S IPHS +++GTGLFLLSMAAAQ Sbjct: 157 MGTQPSGEESPIKAQPSRASASKEEENDGDGQSLLETILERVDRSRMAEEFLDAFHAVQRRGTVHREGMVGMLRHWKKLSDLSGQDLTLGVGAAIAKAFHVEQWELRYRRRNKVFNRSESSAGNVSLGSTPTSNSSQGQLSSKRFLTAVKEGPRGLLLEE-LMAVEAGAARLKASSLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLDPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPEGGSSREGVPPRERLLYSEFLKIFSRDGHVRLYWARLAQLEATTREGEEEKLHFLLWMEPVPASRYITDRPEKATHSKTKLFKRRPHPKIGSSS------LTVAADGEMMGERPLE-QDVPEG-QKGNGDSSGCGERQQVAQQKSGPPILLFPALASVPLPPGVTLPSFPSSWTISTDQARTGRQAAAFSPSCF--PPLA----SPS-PFTLHSSDSSPQPLASTLPHIFEIKSEFIRDLLRTAHKSVPAAKAHGKDTVTNSVIDAECKRVTNKQKVRRNKFLLSKISRSQEQNEVREIFRTTAGPKHLPPQHEQQQEEQKQEQPQKRQQQQQQQQPPPPG--QPQEQQMPIFPFSKSSHCLPSGMSIGWEMEQQCQRHPLVFLHAHQKICSGGEHPPPFGQTNQEYDLNVGAFMLSPAAMSNDQQLN----------------EHHVTQ-------IRNHEAWYPASVGAKRRQYAEKQEHFRENFQYVDVNSQESNEEHRQPFLRRQF-QHELEQGCSMSCWPPSTPWQRVQSRPTQQEEHRQPLSSIPHSKSRLGTGLFLLSMAAAQ 944
BLAST of EWM20491.1 vs. NCBI_GenBank
Match: gi|553187661|ref|XP_005854653.1| (hypothetical protein NGA_0196000, partial [Nannochloropsis gaditana CCMP526] >gi|422294410|gb|EKU21710.1| hypothetical protein NGA_0196000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 222.631 bits (566), Expect = 2.570e-63 Identity = 123/173 (71.10%), Postives = 134/173 (77.46%), Query Frame = 0 Query: 1 METQALEEELLTKGQTSGASASEEEEGDGKGQSLLGTILERVDRPRMAEQFLDAFHAVQRRGKIHREGMVGMLRHWKKLSDLAGEDLTLGIGAAIANALKVEAWELQY-RGGDTVKRSESWTGDSSLGIIHTPNSFQGRLSSKRFPTTVEEGPMGLLLEEELAAVEAGAARLK 172 M TQ EE K Q S ASAS+EEE DG GQSLL TILERVDR RMAE+FLDAFHAVQRRG +HR GMVGMLRHWKKLSDL+G+DLTLG+GAAIA A VE WEL+Y R + RSES G+ SLG T NS QG+LSSKRF T V+EGP GLLL EEL AVEAGAARLK Sbjct: 74 MGTQPSGEESPIKAQPSRASASKEEENDGDGQSLLETILERVDRSRMAEEFLDAFHAVQRRGTVHRGGMVGMLRHWKKLSDLSGQDLTLGVGAAIAKAFHVEQWELRYRRRNKVINRSESSAGNVSLGSTPTSNSSQGQLSSKRFLTAVKEGPRGLLL-EELMAVEAGAARLK 245
BLAST of EWM20491.1 vs. NCBI_GenBank
Match: gi|585100606|gb|EWM20744.1| (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 78.5666 bits (192), Expect = 1.958e-11 Identity = 95/404 (23.51%), Postives = 160/404 (39.60%), Query Frame = 0 Query: 35 LGTILERVDRPRMAEQFLDAFHAVQRRGKIHREGMVGMLRHWKKLSDLAGEDL--TLGIGAAIANALKVEAWELQYRGGDTVKRSESWTGDSSLGIIHTP-NSFQGRLSSKRFPTTVEEGPMGLLLEEELAAVEAGAARLKASPLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLEPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPERGRRRDGVPRRERLLYSEFLKIFSRDGHVRLYWARLAQLEVSMREGEEEKMHFLLWMEPVPASRYITDRPEKT---------TQSKTTLFRQRPSAETGSL-SREAREVCASVGEGEELGW------RPLKLQDFSETEEKGDGASSGCGERQQVALQKRSPPSLFFPALASVPL 419 L ++ER D P M +L AF + + G ++R+ +G+L+ W L + D T G A + A ++ EL+ D P ++ +GRL + R + E GA L+ + + R+ ++ + + +D + VI SN+A+ F P + + R CL FLFAA VA DR +F++ A S + + FLKIF R G + LY L+ +V ++ G E + EP P SR++T RP+ T S ++FR +G + R+A +V E+ W R +++ S + R+ P + P +AS+P+ Sbjct: 173 LDLVIERSDLPAMVPLYLQAFQDLFQEGVLNRKRAIGLLKSWVDLGVMMDGDCDPTFGAFAEVKAAFQINDLELE---------------DPECLAYEPPLHAEKGRLWAARADRVLGE----------------GAKHLEENLVCRQANNSSRAVYMARMDCKDQWVI--SNKAHNTYFRSPAEFMQDMWKRRCLLAFLFAAGVAPEDRLAYFKLLHFATLSTSL----------------MKRTAFLKIFDRQGRMTLY---LSDHQV-VKMGPNEYASLCV-TEPAPPSRHVTTRPDVTRLRSTHHPCNSSSASMFR----VASGDMRRRQACDVSKQWSRAGEIRWPDDTTGRGADMREEKAFNVLRVSEESPASPTSTFSTMPRADPEMLVPCIASIPV 518 The following BLAST results are available for this feature:
BLAST of EWM20491.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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