EWM29675.1, cds1015 (CDS) Nannochloropsis gaditana

Overview
NameEWM29675.1
Unique Namecds1015
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:970762..973167 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29675.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100112g2.5458.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:970762..973167 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM29675.1 vs. NCBI_GenBank
Match: gi|585112249|gb|EWM29675.1| (hypothetical protein Naga_100112g2 [Nannochloropsis gaditana])

HSP 1 Score: 1621.68 bits (4198), Expect = 0.000e+0
Identity = 801/801 (100.00%), Postives = 801/801 (100.00%), Query Frame = 0
Query:    1 MGALDESSQDGGEEESVAKERDGAVSSLYASYFMTPESRLPINHPDHAYSFLPLQSPGLVKAPGRGGRGLGRGAWETLPGLSGTSIVALDFSSALPGSPLLAAALLLEKAGKEEGAVGPTRVLVHHSQTPATDPLPSLSSGLGDTSPDTRSPASSLSSHRAGKRRVASEFNLASRAMASLPASPSARPHGRSPSAHGSLSPGASPRLLRRRSDQQSHPLYPVGNVGPGRRANEPASSMRRLSSEAELRRTWTQKPLHDPREPMPGSRVDEGDLGGRTAGLVAFNALGKSALRRHHSLGPDRQADGARRAAAPPSGLASPSNQPRRALSLSSKSHLHRLHSAATTSQLQPTQQQQQQPHQQFSHGRNRDISSLHFSRVRKLAGALKREGSLLAAMSLLSNEADIQETQFASPSTSLGVIGVMSPPSFSTTHLSSLNMAVLGGGEQIRKHQTPGHSPHLDPSPSVSSPRSGTPPSTISFMQTSARPPGPGLGRGVPGREMGEAISTVPCHDSCLQCQLNDRATEAPPVPALFPWAPLTAQINKTRDIADLCKANAHAMEQWGSSRGKELAKLWSMLFISASACLDALCVEATRLVTATVAGRTSIALSSEALRPWRDGPLGRPLVEKLLTVYEKEGDVQTLATIVCVLDVEHPGSLLQESKRAEYDRYLRAYAELLYRWGALETRAEVLKRLSVSSSASISTEESKCVSMRRQDMVVALRCEACGSLDGGVDAGTGVCQKCKMFAFRCVICQLAVRGQSMFCLNCSHGGHTPHVWDWFIENDMCASGCGCRCFFGQSVEIQCK 801
            MGALDESSQDGGEEESVAKERDGAVSSLYASYFMTPESRLPINHPDHAYSFLPLQSPGLVKAPGRGGRGLGRGAWETLPGLSGTSIVALDFSSALPGSPLLAAALLLEKAGKEEGAVGPTRVLVHHSQTPATDPLPSLSSGLGDTSPDTRSPASSLSSHRAGKRRVASEFNLASRAMASLPASPSARPHGRSPSAHGSLSPGASPRLLRRRSDQQSHPLYPVGNVGPGRRANEPASSMRRLSSEAELRRTWTQKPLHDPREPMPGSRVDEGDLGGRTAGLVAFNALGKSALRRHHSLGPDRQADGARRAAAPPSGLASPSNQPRRALSLSSKSHLHRLHSAATTSQLQPTQQQQQQPHQQFSHGRNRDISSLHFSRVRKLAGALKREGSLLAAMSLLSNEADIQETQFASPSTSLGVIGVMSPPSFSTTHLSSLNMAVLGGGEQIRKHQTPGHSPHLDPSPSVSSPRSGTPPSTISFMQTSARPPGPGLGRGVPGREMGEAISTVPCHDSCLQCQLNDRATEAPPVPALFPWAPLTAQINKTRDIADLCKANAHAMEQWGSSRGKELAKLWSMLFISASACLDALCVEATRLVTATVAGRTSIALSSEALRPWRDGPLGRPLVEKLLTVYEKEGDVQTLATIVCVLDVEHPGSLLQESKRAEYDRYLRAYAELLYRWGALETRAEVLKRLSVSSSASISTEESKCVSMRRQDMVVALRCEACGSLDGGVDAGTGVCQKCKMFAFRCVICQLAVRGQSMFCLNCSHGGHTPHVWDWFIENDMCASGCGCRCFFGQSVEIQCK
Sbjct:    1 MGALDESSQDGGEEESVAKERDGAVSSLYASYFMTPESRLPINHPDHAYSFLPLQSPGLVKAPGRGGRGLGRGAWETLPGLSGTSIVALDFSSALPGSPLLAAALLLEKAGKEEGAVGPTRVLVHHSQTPATDPLPSLSSGLGDTSPDTRSPASSLSSHRAGKRRVASEFNLASRAMASLPASPSARPHGRSPSAHGSLSPGASPRLLRRRSDQQSHPLYPVGNVGPGRRANEPASSMRRLSSEAELRRTWTQKPLHDPREPMPGSRVDEGDLGGRTAGLVAFNALGKSALRRHHSLGPDRQADGARRAAAPPSGLASPSNQPRRALSLSSKSHLHRLHSAATTSQLQPTQQQQQQPHQQFSHGRNRDISSLHFSRVRKLAGALKREGSLLAAMSLLSNEADIQETQFASPSTSLGVIGVMSPPSFSTTHLSSLNMAVLGGGEQIRKHQTPGHSPHLDPSPSVSSPRSGTPPSTISFMQTSARPPGPGLGRGVPGREMGEAISTVPCHDSCLQCQLNDRATEAPPVPALFPWAPLTAQINKTRDIADLCKANAHAMEQWGSSRGKELAKLWSMLFISASACLDALCVEATRLVTATVAGRTSIALSSEALRPWRDGPLGRPLVEKLLTVYEKEGDVQTLATIVCVLDVEHPGSLLQESKRAEYDRYLRAYAELLYRWGALETRAEVLKRLSVSSSASISTEESKCVSMRRQDMVVALRCEACGSLDGGVDAGTGVCQKCKMFAFRCVICQLAVRGQSMFCLNCSHGGHTPHVWDWFIENDMCASGCGCRCFFGQSVEIQCK 801          
BLAST of EWM29675.1 vs. NCBI_GenBank
Match: gi|1210520308|dbj|GAX20739.1| (hypothetical protein FisN_7Hh049 [Fistulifera solaris])

HSP 1 Score: 145.591 bits (366), Expect = 4.525e-32
Identity = 75/179 (41.90%), Postives = 102/179 (56.98%), Query Frame = 0
Query:  622 LVEKLLTVYEKEGDVQTLATIVCVLDVEHP-----GSLLQESKRAEYDRYLRAYAELLYRWGALETRAEVLKRLS----VSSSASISTEESKCVSMRRQDMVVALRCEACGSLDGGVDAGTGVCQKCKMFAFRCVICQLAVRGQSMFCLNCSHGGHTPHVWDWFIENDMCASGCGCRCF 791
            L++ LL  YE  GDVQ LA+IVCVL  ++      G L+ +++  +YD Y+R YA+LLY WG L  RAEVLK LS       +  +S    + V+      +V L C  CG   G  + GT  C  C+ +AFRC IC  AVRG    C +C HGGH  H+  WF++ + C +GCGC+C 
Sbjct:  985 LIDNLLKYYESLGDVQMLASIVCVLRSKNDSGLDAGKLISDNREGKYDIYIRRYADLLYGWGLLTVRAEVLKHLSPLPEFHRTRRVSQALDEDVTSEPTIGLVFL-CARCG---GETNLGTNYCHTCRDYAFRCSICDNAVRGLFTVCKSCGHGGHMNHLQSWFLKMEECPAGCGCKCL 1159          
BLAST of EWM29675.1 vs. NCBI_GenBank
Match: gi|219111303|ref|XP_002177403.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411938|gb|EEC51866.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 142.895 bits (359), Expect = 4.167e-31
Identity = 70/181 (38.67%), Postives = 95/181 (52.49%), Query Frame = 0
Query:  622 LVEKLLTVYEKEGDVQTLATIVCVL-------DVEHP-GSLLQESKRAEYDRYLRAYAELLYRWGALETRAEVLKRLSVSSSASISTEESKCVSMRRQDMVVALRCEACGSLDGGVDAGTGVCQKCKMFAFRCVICQLAVRGQSMFCLNCSHGGHTPHVWDWFIENDMCASGCGCRCFFGQ 794
            LV+ +   YE  GDVQ L+T+VCVL       ++  P   LL   +  +YD Y+  Y  LLY WG L  RAE+ K +S +    + +        +   + +A  C  CG   G  + G   C+ C+ +AFRC+IC  AVRG    C +C HGGH  H+  WF  N  C SGCGC+C FGQ
Sbjct: 1107 LVQNIFQYYESLGDVQMLSTLVCVLRGGYSSQNILRPRWYLLPRDQEVKYDTYIHRYGSLLYCWGLLSIRAELRKHMSGALPFDVFSVGGTNSDNQSTGIALAFICPQCG---GESEVGYNYCRVCEDYAFRCIICDNAVRGLFAVCDSCGHGGHVGHIQSWFERNSQCPSGCGCKCIFGQ 1284          
BLAST of EWM29675.1 vs. NCBI_GenBank
Match: gi|1072232012|gb|OEU16744.1| (hypothetical protein FRACYDRAFT_239340 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 139.813 bits (351), Expect = 4.323e-30
Identity = 76/183 (41.53%), Postives = 95/183 (51.91%), Query Frame = 0
Query:  616 GPLGRPLVEKLLTVYEKEGDVQTLATIVCVLDVEHPGS-------LLQESKRAEYDRYLRAYAELLYRWGALETRAEVLKRLSVSSSAS----ISTEESKCVSMRRQDMVVALRCEACGSLDGGVDAGTGVCQKCKMFAFRCVICQLAVRGQSMFCLNCSHGGHTPHVWDWFIENDMCASGCG 787
            G LG  ++      YE   DVQ LAT+ CVL   H          LL ES+    D Y+  YAE+LY WG L TRAE+ K L      +    I  +E K       D+ VAL C  C +   GV++ T  CQ C+ FAFRC IC +AVRG   FC  C HGGH  H+ +WF +N  C +GCG
Sbjct: 1186 GALGVDMINNFFLYYEALQDVQMLATMFCVLSDRHHQDQRTNRLCLLPESREKVCDTYIIRYAEVLYSWGLLNTRAELNKHLQRKYEQNELNFIPVKEGK---QEEYDLGVALSCPTCHN---GVNSRTNYCQSCRDFAFRCSICDIAVRGIFTFCDICQHGGHLRHMVNWFKKNSSCPTGCG 1362          
BLAST of EWM29675.1 vs. NCBI_GenBank
Match: gi|1133455004|ref|XP_019849372.1| (PREDICTED: WD repeat-containing protein 59-like [Amphimedon queenslandica])

HSP 1 Score: 134.42 bits (337), Expect = 1.191e-28
Identity = 91/297 (30.64%), Postives = 120/297 (40.40%), Query Frame = 0
Query:  543 RDIADLCKANAHAMEQWGSSRGKELAKLWSMLFISASACLDALCVEATRLVTATVAGRTSIALSSEALRPWRDGPLGRPLVEKLLTVYEKEGDVQTLATIVCVLDV--------------------------EHPGSL-------------LQESKRAEY---------DRYLRAYAELLYRWGALETRAEVLKRLSVSSSASISTEESKCVSMRRQDMVVALRCEACGSLDGGVDAGTGVCQKCKMFAFRCVICQLAVRGQSMFCLNCSHGGHTPHVWDWFIENDMCASGCGCRCF 791
            ++I D+C  NA A    G    ++L   W+                A  L+ A  A   +  L   A  PW   P GR LV+ L   Y    DVQTLA + C+  +                          EHP  L             LQ                D Y R Y+ +LYRWG L  R+EV+K  S             C + R +++ +A +C  C +L  G       C KC +FA  C +C LAV+G S  CL+C HGGHT H+ DWF  +  C SGCGCRC 
Sbjct:  685 KNIEDICILNACAAAAVGR---QDLVNTWT----------------AVSLIAADTAKHETSPLEPGAEGPWAIHPFGRQLVQSLFDYYSSIHDVQTLAMLSCICQLQCLHVNERFPHSSSSSSSPSLPKKTQEHPVGLEGIVIETVDDEEMLQHQNNCRILDAVMSLRCDEYRRCYSNILYRWGLLTQRSEVMKYQS-------------CGAYRHKEITLAGQCRGCRALLKG-----PYCMKCHLFAITCSLCNLAVKGSSNLCLSCGHGGHTNHLMDWFSNHVTCPSGCGCRCL 944          
BLAST of EWM29675.1 vs. NCBI_GenBank
Match: gi|1210529587|dbj|GAX11681.1| (hypothetical protein FisN_7Lh049 [Fistulifera solaris])

HSP 1 Score: 130.568 bits (327), Expect = 2.467e-27
Identity = 71/179 (39.66%), Postives = 95/179 (53.07%), Query Frame = 0
Query:  622 LVEKLLTVYEKEGDVQTLATIVCVLDVEHP-----GSLLQESKRAEYDRYLRAYAELLYRWGALETRAEVLKRLS----VSSSASISTEESKCVSMRRQDMVVALRCEACGSLDGGVDAGTGVCQKCKMFAFRCVICQLAVRGQSMFCLNCSHGGHTPHVWDWFIENDMCASGCGCRCF 791
            L++ LL  YE  GD+Q LA+IVCVL  ++      G L+   +  +YD Y+R YA+LLY W  L  RAEVLK LS       +  +     + V+      +V L C  C       + GT  C  C+ +AFRC IC+ AVRG    C +C HGGH  H+  WF   + C SGCGC+C 
Sbjct:  980 LIDNLLKYYESLGDIQMLASIVCVLRSKNDSSRGAGKLIPNIREEKYDIYIRRYADLLYGWSLLIVRAEVLKHLSPLPEFHRTRRLPEAFDEDVTFEPTIGLVFL-CTRCHR---ETNLGTNYCHACRDYAFRCSICENAVRGLFSVCKSCGHGGHMNHLQSWFSMMEECPSGCGCKCL 1154          
BLAST of EWM29675.1 vs. NCBI_GenBank
Match: gi|1173959733|gb|OQS05938.1| (hypothetical protein THRCLA_01981 [Thraustotheca clavata])

HSP 1 Score: 118.627 bits (296), Expect = 9.037e-25
Identity = 56/145 (38.62%), Postives = 80/145 (55.17%), Query Frame = 0
Query:  649 EHPGSLLQESK---RAEYDRYLRAYAELLYRWGALETRAEVLKRLSVSSSASISTEESKCVSMRRQDMVVALRCEACGSLDGGVDAGTGVCQKCKMFAFRCVICQLAVRGQSMFCLNCSHGGHTPHVWDWFIENDMCASGCGCRC 790
            ++P  +L  SK   R  YD Y  AYA++LY +GAL+TR E+LK L+ +                 + + +AL C  CG     +      C +CK F+ +C +C+L VRG+SMFC+NC HGGH  H+  WF   + C +GCGC C
Sbjct:  282 KYPYVVLLSSKPKDRERYDEYKHAYADVLYHYGALKTRCEMLKHLTTTPPP-------------HEGLTLALHCHTCGHPTSEL-----YCAQCKDFSIKCSVCELVVRGESMFCINCGHGGHRAHLAQWFETENACPTGCGCWC 408          
BLAST of EWM29675.1 vs. NCBI_GenBank
Match: gi|957847807|ref|XP_014674399.1| (PREDICTED: WD repeat-containing protein 59-like [Priapulus caudatus])

HSP 1 Score: 110.538 bits (275), Expect = 1.655e-24
Identity = 56/138 (40.58%), Postives = 74/138 (53.62%), Query Frame = 0
Query:  654 LLQESKRAEYDRYLRAYAELLYRWGALETRAEVLKRLSVSSSASISTEESKCVSMRRQDMVVALRCEACGSLDGGVDAGTGVCQKCKMFAFRCVICQLAVRGQSMFCLNCSHGGHTPHVWDWFIENDMCASGCGCRCF 791
            LL     A++D Y  AYA +LY W   E R EVL  +S +      TE+ + V        V   C  CG  +     G   C  CK +AFRC +C ++V+G + FCL C HGGHT H+ DWF E ++C +GCGCRC 
Sbjct:   22 LLDPDVTAQHDAYKHAYANVLYYWKLHERRIEVLNFVSSA------TEQHRGVE-------VQTLCHHCGEKNA---TGGPQCSHCKHYAFRCSVCHVSVKGPANFCLACYHGGHTYHLMDWFAEQEVCPTGCGCRCL 143          
BLAST of EWM29675.1 vs. NCBI_GenBank
Match: gi|953501427|emb|CEG37428.1| (Conserved WD40 repeat-containing protein [Plasmopara halstedii])

HSP 1 Score: 121.324 bits (303), Expect = 2.141e-24
Identity = 62/138 (44.93%), Postives = 80/138 (57.97%), Query Frame = 0
Query:  653 SLLQESKRAEYDRYLRAYAELLYRWGALETRAEVLKRLSVSSSASISTEESKCVSMRRQDMVVALRCEACGSLDGGVDAGTGVCQKCKMFAFRCVICQLAVRGQSMFCLNCSHGGHTPHVWDWFIENDMCASGCGCRC 790
            SLL E + A YD Y  AYA++LYR+GA+  R EVLK      + S  T + + +S       + L C +C S    +D    VC  C+ FA RC +CQL VRGQSMFC+ C HGGHT H+ +WF     C +GCGC C
Sbjct: 1230 SLLPEDE-ARYDIYKEAYADVLYRYGAMNLRNEVLK------TKSYGTHDPRGIS-------IGLVCASCTS--KTIDL---VCSSCRDFAVRCSVCQLVVRGQSMFCMTCGHGGHTAHLREWFEIETTCPTGCGCWC 1348          
BLAST of EWM29675.1 vs. NCBI_GenBank
Match: gi|675374252|gb|KFM67154.1| (WD repeat-containing protein 59, partial [Stegodyphus mimosarum])

HSP 1 Score: 112.849 bits (281), Expect = 1.370e-23
Identity = 52/138 (37.68%), Postives = 77/138 (55.80%), Query Frame = 0
Query:  654 LLQESKRAEYDRYLRAYAELLYRWGALETRAEVLKRLSVSSSASISTEESKCVSMRRQDMVVALRCEACGSLDGGVDAGTGVCQKCKMFAFRCVICQLAVRGQSMFCLNCSHGGHTPHVWDWFIENDMCASGCGCRCF 791
            LL  +   ++D+Y   YA++LYRW  LE RA+VLK +S S+              + + +     C+ C       D     CQ CK ++F C+IC ++V+G S FC+ C HGGHT H+ +WF + D+C SGCGC+C 
Sbjct:  188 LLGPAYSTQFDQYKTIYADVLYRWNLLEQRAQVLKTVSTSAE-------------KHKGIEFVTECQHCKK-----DVTGAQCQSCKKYSFCCIICGVSVKGCSSFCMACGHGGHTKHMEEWFRDMDVCPSGCGCKCL 307          
The following BLAST results are available for this feature:
BLAST of EWM29675.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112249|gb|EWM29675.1|0.000e+0100.00hypothetical protein Naga_100112g2 [Nannochloropsi... [more]
gi|1210520308|dbj|GAX20739.1|4.525e-3241.90hypothetical protein FisN_7Hh049 [Fistulifera sola... [more]
gi|219111303|ref|XP_002177403.1|4.167e-3138.67predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1072232012|gb|OEU16744.1|4.323e-3041.53hypothetical protein FRACYDRAFT_239340 [Fragilario... [more]
gi|1133455004|ref|XP_019849372.1|1.191e-2830.64PREDICTED: WD repeat-containing protein 59-like [A... [more]
gi|1210529587|dbj|GAX11681.1|2.467e-2739.66hypothetical protein FisN_7Lh049 [Fistulifera sola... [more]
gi|1173959733|gb|OQS05938.1|9.037e-2538.62hypothetical protein THRCLA_01981 [Thraustotheca c... [more]
gi|957847807|ref|XP_014674399.1|1.655e-2440.58PREDICTED: WD repeat-containing protein 59-like [P... [more]
gi|953501427|emb|CEG37428.1|2.141e-2444.93Conserved WD40 repeat-containing protein [Plasmopa... [more]
gi|675374252|gb|KFM67154.1|1.370e-2337.68WD repeat-containing protein 59, partial [Stegodyp... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1016rna1016Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications