EWM20549.1, cds10123 (CDS) Nannochloropsis gaditana

Overview
NameEWM20549.1
Unique Namecds10123
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037264.1:6827..7174 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20549.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100807g2.7977.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:6827..7174 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20549.1 vs. NCBI_GenBank
Match: gi|585100246|gb|EWM20549.1| (hypothetical protein Naga_100807g2 [Nannochloropsis gaditana])

HSP 1 Score: 233.802 bits (595), Expect = 7.508e-78
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 
Query:    1 MTSSRTFTPFALRFLDESIPRLITLIVIAHFFDGTTVTKHLTSSTHILTGNVAHIVQREFRRVKRLVEAMPVPIRLKPPTHAQDTSLSVCMIYLPRKESKMALPLGGIDLKAGKA 115
            MTSSRTFTPFALRFLDESIPRLITLIVIAHFFDGTTVTKHLTSSTHILTGNVAHIVQREFRRVKRLVEAMPVPIRLKPPTHAQDTSLSVCMIYLPRKESKMALPLGGIDLKAGKA
Sbjct:    1 MTSSRTFTPFALRFLDESIPRLITLIVIAHFFDGTTVTKHLTSSTHILTGNVAHIVQREFRRVKRLVEAMPVPIRLKPPTHAQDTSLSVCMIYLPRKESKMALPLGGIDLKAGKA 115
The following BLAST results are available for this feature:
BLAST of EWM20549.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100246|gb|EWM20549.1|7.508e-78100.00hypothetical protein Naga_100807g2 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10154rna10154Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications