EWM20560.1, cds10113 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20560.1 vs. NCBI_GenBank
Match: gi|585100269|gb|EWM20560.1| (iron ascorbate oxidoreductase, partial [Nannochloropsis gaditana]) HSP 1 Score: 243.432 bits (620), Expect = 1.315e-81 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 Query: 1 MRTGLCRICRRPGRSYRRPSFPLPEGTVCRLSSSFSTTTIPVIDLSPFVDPHASESSKKQCAEAVHHAAVNVGFLYVKNHGVDPSITDGARAHARAFFSLPQVRAPRKEGEREGGREGG 119 MRTGLCRICRRPGRSYRRPSFPLPEGTVCRLSSSFSTTTIPVIDLSPFVDPHASESSKKQCAEAVHHAAVNVGFLYVKNHGVDPSITDGARAHARAFFSLPQVRAPRKEGEREGGREGG Sbjct: 1 MRTGLCRICRRPGRSYRRPSFPLPEGTVCRLSSSFSTTTIPVIDLSPFVDPHASESSKKQCAEAVHHAAVNVGFLYVKNHGVDPSITDGARAHARAFFSLPQVRAPRKEGEREGGREGG 119
BLAST of EWM20560.1 vs. NCBI_GenBank
Match: gi|1011961887|ref|WP_062768296.1| (2OG-Fe(II) oxygenase [Tistrella mobilis] >gi|1011734141|gb|KYO50400.1| 2OG-Fe(II) oxygenase [Tistrella mobilis]) HSP 1 Score: 71.2478 bits (173), Expect = 4.078e-12 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 0 Query: 34 SFSTTTIPVIDLSPFVDPHASESSKKQCAEAVHHAAVNVGFLYVKNHGVDPSITDGARAHARAFFSLPQ 102 S + T IPVID VDP ++ + + +AV A VGF YV+NHGVDPS+ DG AR FF+LP Sbjct: 22 SLAFTEIPVIDFGALVDPASTPAERLAVGDAVRDACTRVGFFYVRNHGVDPSVIDGTYRAARDFFALPM 90
BLAST of EWM20560.1 vs. NCBI_GenBank
Match: gi|504557280|ref|WP_014744382.1| (2OG-Fe(II) oxygenase [Tistrella mobilis] >gi|388527506|gb|AFK52703.1| putative iron/ascorbate oxidoreductase [Tistrella mobilis KA081020-065]) HSP 1 Score: 70.0922 bits (170), Expect = 9.407e-12 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 0 Query: 34 SFSTTTIPVIDLSPFVDPHASESSKKQCAEAVHHAAVNVGFLYVKNHGVDPSITDGARAHARAFFSLPQ 102 S + T IPVID VDP ++++ + +AV A VGF YV+NHGVDP++ G AR FF+LP Sbjct: 22 SLAFTEIPVIDFGALVDPASTQAERMAVGDAVRDACTRVGFFYVRNHGVDPAVISGTYGAARDFFALPM 90
BLAST of EWM20560.1 vs. NCBI_GenBank
Match: gi|627916506|ref|XP_007691696.1| (hypothetical protein COCMIDRAFT_105249 [Bipolaris oryzae ATCC 44560] >gi|576928138|gb|EUC41792.1| hypothetical protein COCMIDRAFT_105249 [Bipolaris oryzae ATCC 44560]) HSP 1 Score: 67.0106 bits (162), Expect = 1.490e-10 Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 0 Query: 37 TTTIPVIDLSPFVDPHASESSKKQCAEAVHHAAVNVGFLYVKNHGVDPSITDGARAHARAFFSLPQVRAPRKEGEREGGREGG 119 T+ +P ID+SPF++P + SS++Q A+A++ A GF Y+ HG+ S D + AR FF+LP + E G R+GG Sbjct: 49 TSILPKIDISPFLNPSSPASSRRQTAQAINAACTTYGFFYLTGHGIPQSQLDSVISLARQFFALPLSEKLKIERLDAGTRQGG 131
BLAST of EWM20560.1 vs. NCBI_GenBank
Match: gi|1029187612|gb|OAL52175.1| (Clavaminate synthase-like protein [Pyrenochaeta sp. DS3sAY3a]) HSP 1 Score: 65.855 bits (159), Expect = 2.966e-10 Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 0 Query: 40 IPVIDLSPFVDPHASESSKKQCAEAVHHAAVNVGFLYVKNHGVDPSITDGARAHARAFFSLPQVRAPRKEGEREGGREGG 119 +P+ID+S F+D +A+ +++ A+A++ A VN GF Y+ HG+ PS D A AR+FF+LP + + GG EGG Sbjct: 47 LPIIDISAFLDANATREARQTTAKAINAACVNYGFFYLTGHGIPPSKLDEIIALARSFFALPLDEKNKIKRFDAGGPEGG 126
BLAST of EWM20560.1 vs. NCBI_GenBank
Match: gi|1110595546|emb|CZR56842.1| (related to gibberellin 20-oxidase [Phialocephala subalpina]) HSP 1 Score: 65.4698 bits (158), Expect = 3.951e-10 Identity = 27/71 (38.03%), Postives = 49/71 (69.01%), Query Frame = 0 Query: 32 SSSFSTTTIPVIDLSPFVDPHASESSKKQCAEAVHHAAVNVGFLYVKNHGVDPSITDGARAHARAFFSLPQ 102 S++ S T +P+IDL+PF+ P ++ S+ QCA+++ HA GF+Y+ NHG+ P++ A + ++ FF+L + Sbjct: 3 STTESPTQLPIIDLTPFLSPTSTPQSRLQCAKSLVHACHTTGFIYITNHGIPPALLSEAFSWSKRFFALSE 73
BLAST of EWM20560.1 vs. NCBI_GenBank
Match: gi|1188282068|gb|OSS50956.1| (hypothetical protein B5807_04334 [Epicoccum nigrum]) HSP 1 Score: 65.0846 bits (157), Expect = 5.436e-10 Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 0 Query: 40 IPVIDLSPFVDPHASESSKKQCAEAVHHAAVNVGFLYVKNHGVDPSITDGARAHARAFFSLPQVRAPRKEGEREGGREGG 119 +P+ID+S F+DP++S S ++ A+A++ A VN GF Y+ HG+ + D AR FF+LP R + + GG EGG Sbjct: 50 LPIIDISSFLDPNSSTSDRQTTAQAINAACVNYGFFYLTGHGIPTAKLDEIIDLARRFFALPLDRKNQIKRFDAGGPEGG 129
BLAST of EWM20560.1 vs. NCBI_GenBank
Match: gi|1190900562|gb|OTA90744.1| (hypothetical protein M434DRAFT_77399 [Hypoxylon sp. CO27-5]) HSP 1 Score: 64.6994 bits (156), Expect = 7.066e-10 Identity = 29/63 (46.03%), Postives = 37/63 (58.73%), Query Frame = 0 Query: 40 IPVIDLSPFVDPHASESSKKQCAEAVHHAAVNVGFLYVKNHGVDPSITDGARAHARAFFSLPQ 102 IP +D+SPF DP+ASE +K +AV HA GF Y+ HGV +G A+ FF LPQ Sbjct: 15 IPTVDISPFTDPNASEEAKNAVVDAVRHACTTYGFFYLAGHGVSAEQREGILNCAKKFFELPQ 77
BLAST of EWM20560.1 vs. NCBI_GenBank
Match: gi|1055458641|ref|WP_067119042.1| (oxidoreductase [Streptomyces yokosukanensis] >gi|973838411|gb|KUN08729.1| oxidoreductase [Streptomyces yokosukanensis]) HSP 1 Score: 64.3142 bits (155), Expect = 9.798e-10 Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 0 Query: 31 LSSSFSTTTIPVIDLSPFVDPHASESSKKQCAEAVHHAAVNVGFLYVKNHGVDPSITDGARAHARAFFSLPQVRAPRKEGEREGGR 116 + +S S+ +PVIDL P++D E+++ A V A GFL V HGVDP + G RA ARAFF LP+ ++ R GGR Sbjct: 1 MRTSVSSARVPVIDLRPWLD--GDEAARTALARTVDEALQTAGFLLVTGHGVDPGLRFGIRAAARAFFLLPEA-VKQRYAVRVGGR 83
BLAST of EWM20560.1 vs. NCBI_GenBank
Match: gi|1190918778|gb|OTB07896.1| (hypothetical protein M426DRAFT_52668 [Hypoxylon sp. CI-4A]) HSP 1 Score: 64.3142 bits (155), Expect = 1.137e-9 Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 0 Query: 26 GTVCRLSSSFSTTTIPVIDLSPFVDPHASESSKKQCAEAVHHAAVNVGFLYVKNHGVDPSITDGARAHARAFFSLPQ 102 GT+ ++ + + IP +D+SPF DP ASE +K+ +A+ HA GF Y+ HGV P +G A+ FF+L Q Sbjct: 2 GTIEKIPET-APDAIPTVDISPFTDPKASEEAKRGVVDAIRHACTTYGFFYLAGHGVTPEKREGILDCAKRFFTLSQ 77 The following BLAST results are available for this feature:
BLAST of EWM20560.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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