EWM20572.1, cds10101 (CDS) Nannochloropsis gaditana

Overview
NameEWM20572.1
Unique Namecds10101
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037263.1:24475..24685 -
Alignment locationKK037263.1:24304..24359 -
Alignment locationKK037263.1:23958..24086 -
Alignment locationKK037263.1:23644..23745 -

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Properties
Property NameValue
Start range23644
Start range.
Protein idEWM20572.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101330g1.3584.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:24475..24685 -
KK037263.1supercontigKK037263.1:24304..24359 -
KK037263.1supercontigKK037263.1:23958..24086 -
KK037263.1supercontigKK037263.1:23644..23745 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20572.1 vs. NCBI_GenBank
Match: gi|585100295|gb|EWM20572.1| (hypothetical protein Naga_101330g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 337.035 bits (863), Expect = 4.671e-117
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 
Query:    1 MAGGVAFPPFPPLSSCLWFQYGAHFPPSCPTPVPNVINNQQLSQNMAAAPPSRGMEGGGPRQPSGLGGNVGLGGISTEGMEDLPKYDEEISKCKRFLLEFEDGEVVNIEGGEDGEAAGLGIGRKKYKILMQRIADRELSSLLVETDDILAYPQLLSVAEGDSVEDF 166
            MAGGVAFPPFPPLSSCLWFQYGAHFPPSCPTPVPNVINNQQLSQNMAAAPPSRGMEGGGPRQPSGLGGNVGLGGISTEGMEDLPKYDEEISKCKRFLLEFEDGEVVNIEGGEDGEAAGLGIGRKKYKILMQRIADRELSSLLVETDDILAYPQLLSVAEGDSVEDF
Sbjct:    1 MAGGVAFPPFPPLSSCLWFQYGAHFPPSCPTPVPNVINNQQLSQNMAAAPPSRGMEGGGPRQPSGLGGNVGLGGISTEGMEDLPKYDEEISKCKRFLLEFEDGEVVNIEGGEDGEAAGLGIGRKKYKILMQRIADRELSSLLVETDDILAYPQLLSVAEGDSVEDF 166
The following BLAST results are available for this feature:
BLAST of EWM20572.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100295|gb|EWM20572.1|4.671e-117100.00hypothetical protein Naga_101330g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10132rna10132Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications