EWM20582.1, cds10091 (CDS) Nannochloropsis gaditana

Overview
NameEWM20582.1
Unique Namecds10091
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037262.1:96929..97363 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20582.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101460g1.10515.mrna
GbkeyCDS
End range.
End range97363
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:96929..97363 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
Homology
BLAST of EWM20582.1 vs. NCBI_GenBank
Match: gi|585100315|gb|EWM20582.1| (hypothetical protein Naga_101460g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 275.018 bits (702), Expect = 3.290e-93
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
Query:    1 SSSPPSLPPSLPTPPPGDPWRTNRQREGGRASREPPPPLPSHASSPALPPSLPRPRPPPLPQLQQAARLLQGAFQLQLFGFDVIVPTYGEGEREGDEGGREGGWEAELVVVDVNFFPSFKEVEDFPARLRAFLRERAGGRRGGT 144
            SSSPPSLPPSLPTPPPGDPWRTNRQREGGRASREPPPPLPSHASSPALPPSLPRPRPPPLPQLQQAARLLQGAFQLQLFGFDVIVPTYGEGEREGDEGGREGGWEAELVVVDVNFFPSFKEVEDFPARLRAFLRERAGGRRGGT
Sbjct:    1 SSSPPSLPPSLPTPPPGDPWRTNRQREGGRASREPPPPLPSHASSPALPPSLPRPRPPPLPQLQQAARLLQGAFQLQLFGFDVIVPTYGEGEREGDEGGREGGWEAELVVVDVNFFPSFKEVEDFPARLRAFLRERAGGRRGGT 144          
BLAST of EWM20582.1 vs. NCBI_GenBank
Match: gi|1210530153|dbj|GAX11216.1| (inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase [Fistulifera solaris])

HSP 1 Score: 65.0846 bits (157), Expect = 1.542e-9
Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0
Query:   57 PPPLPQLQQAARLLQGAFQLQLFGFDVIVPTYGEGEREGDEGGREGGWEAELVVVDVNFFPSFKEVEDFPARLRAFLRERA 137
            P  + ++Q  A  L+ AFQL+LFGFDVI+      E   +E  + G  E  L VVDVN+FPS+KEV  FP+ L  FL +R 
Sbjct:  419 PLTVQRVQPIAAALKEAFQLELFGFDVIL------EVNPEEDSKNGDDEPMLWVVDVNYFPSYKEVPQFPSLLAQFLTQRV 493          
BLAST of EWM20582.1 vs. NCBI_GenBank
Match: gi|1072234659|gb|OEU19388.1| (hypothetical protein FRACYDRAFT_167635 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 62.003 bits (149), Expect = 3.606e-9
Identity = 39/110 (35.45%), Postives = 57/110 (51.82%), Query Frame = 0
Query:   32 SREPPPPLPSHASSPALPPSLPRPRPPPLPQLQQAARLLQGAFQLQLFGFDVIVPTYGEGEREGDEGGREGGWEAELVVVDVNFFPSFKEVEDFPARLRAFLRERAGGRR 141
            S+ P P L   ASS     S P   P  + +++    +L+ AF L+LFGFD+++     G   GD             VVDVN+FPS+KEV +FP+ L  +L +R   +R
Sbjct:   42 SQRPYPKLKDFASSTL---SAPVHVPVTVHEVKPIVDVLKNAFGLELFGFDILI-----GSNNGD-----------CFVVDVNYFPSYKEVPNFPSLLAQYLTQRVLEQR 132          
BLAST of EWM20582.1 vs. NCBI_GenBank
Match: gi|669161246|ref|XP_008616185.1| (hypothetical protein SDRG_11909 [Saprolegnia diclina VS20] >gi|530732090|gb|EQC30332.1| hypothetical protein SDRG_11909 [Saprolegnia diclina VS20])

HSP 1 Score: 60.4622 bits (145), Expect = 4.566e-8
Identity = 39/101 (38.61%), Postives = 50/101 (49.50%), Query Frame = 0
Query:   35 PPPPLPSHASSPALPPSLPRPRPPPLPQLQQAARLLQGAFQLQLFGFDVIVPTYGEGEREGDEGGREGGWEAELVVVDVNFFPSFKEVEDFPARLRAFLRE 135
            P    PS A S AL  SL               R +Q A QL LFGFDVI+              R G    + +V+DVN+FPSFKE+ DF AR+R+ +R+
Sbjct:  258 PVVATPSSAISAALTESL-----------HAIGRAIQAATQLSLFGFDVIID------------ARTG----QHLVIDVNYFPSFKELPDFDARMRSLMRQ 331          
BLAST of EWM20582.1 vs. NCBI_GenBank
Match: gi|813139303|ref|XP_012198834.1| (hypothetical protein SPRG_04523 [Saprolegnia parasitica CBS 223.65] >gi|641536742|gb|KDO30623.1| hypothetical protein SPRG_04523 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 60.077 bits (144), Expect = 4.725e-8
Identity = 43/121 (35.54%), Postives = 62/121 (51.24%), Query Frame = 0
Query:   23 NRQREGGRASR-EPPPPLPSHASSPALPPSLPRPRPPPLP-------QLQQAARLLQGAFQLQLFGFDVIVPTYGEGEREGDEGGREGGWEAELVVVDVNFFPSFKEVEDFPARLRAFLRE 135
            N +R G ++   +   P P+ A+S A+ P+ P    PP          L    R +Q A QL LFGFDVI+              R G    + +V+DVN+FPSFKE+ DF AR+R+ +R+
Sbjct:  143 NLERGGAKSVEFDTQSPFPT-AASFAIAPA-PVVATPPTAISAALTESLHAIGRAIQDATQLSLFGFDVII------------DARTG----QHLVIDVNYFPSFKELPDFDARMRSLMRQ 245          
BLAST of EWM20582.1 vs. NCBI_GenBank
Match: gi|223997760|ref|XP_002288553.1| (hypothetical protein THAPSDRAFT_261937 [Thalassiosira pseudonana CCMP1335] >gi|220975661|gb|EED93989.1| hypothetical protein THAPSDRAFT_261937, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 60.4622 bits (145), Expect = 4.758e-8
Identity = 40/128 (31.25%), Postives = 60/128 (46.88%), Query Frame = 0
Query:   10 SLPTPPPGDPWRTNRQREGGRASREPPPPLPSHASSPALPPSLPRPRPPPLPQLQQAARLLQGAFQLQLFGFDVIVPTYGEGEREGDEGGREGGWEAELVVVDVNFFPSFKEVEDFPARLRAFLRERA 137
            SLP  P G+        E  RA+        S+   P L   +      P+         L+ AF L+LFGFDV+V    +  R+      +   + E++VVDVN+FP +KEV  FP+ L  +L ++A
Sbjct:  198 SLPDLPIGENEILLENGERKRATTNTGQSTASYVD-PDLACYVTTVEIEPVTHA------LRAAFGLELFGFDVLVKYDEKKSRDNATMDADDNDDKEILVVDVNYFPGYKEVPHFPSLLAQYLTQKA 318          
BLAST of EWM20582.1 vs. NCBI_GenBank
Match: gi|698822199|ref|XP_009844128.1| (hypothetical protein H257_17146 [Aphanomyces astaci] >gi|574100780|gb|ETV66353.1| hypothetical protein H257_17146 [Aphanomyces astaci])

HSP 1 Score: 60.077 bits (144), Expect = 7.465e-8
Identity = 33/73 (45.21%), Postives = 38/73 (52.05%), Query Frame = 0
Query:   62 QLQQAARLLQGAFQLQLFGFDVIVPTYGEGEREGDEGGREGGWEAELVVVDVNFFPSFKEVEDFPARLRAFLR 134
            Q+Q   R +Q    L LFGFDVIV                      LVVVDVN+FPSFKE+ DF A LRA +R
Sbjct:  269 QVQAIGRAIQATTGLSLFGFDVIV----------------AAKTNHLVVVDVNYFPSFKEMTDFSAMLRAHVR 325          
BLAST of EWM20582.1 vs. NCBI_GenBank
Match: gi|1210527546|dbj|GAX13831.1| (inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase [Fistulifera solaris])

HSP 1 Score: 59.3066 bits (142), Expect = 1.410e-7
Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 0
Query:   57 PPPLPQLQQAARLLQGAFQLQLFGFDVIVPTYGEGEREGDEGGREGGWEAELVVVDVNFFPSFKEVEDFPARLRAFLRERAGGRRG 142
            P  + ++Q  A  L+ AF+L+LFGFDVI+      E   +E  +    E  L VVDVN+FPS+KEV  FPA L   L +R      
Sbjct:  421 PLTVQRVQPIAAALKEAFRLELFGFDVIL------EVRPEEDSKNKDDEPMLWVVDVNYFPSYKEVPHFPALLAQLLTQRVIANMN 500          
BLAST of EWM20582.1 vs. NCBI_GenBank
Match: gi|1173932576|gb|OQR84520.1| (inositol-tetrakisphosphate 1-kinase-like [Achlya hypogyna])

HSP 1 Score: 57.7658 bits (138), Expect = 4.105e-7
Identity = 34/87 (39.08%), Postives = 46/87 (52.87%), Query Frame = 0
Query:   49 PPSLPRPRPPPLPQLQQAA-RLLQGAFQLQLFGFDVIVPTYGEGEREGDEGGREGGWEAELVVVDVNFFPSFKEVEDFPARLRAFLR 134
            P S  +P    +     A  R +QGA QL LFGFDVI+ + G G                 +V+DVN+FPSFKE+ DF AR+R  ++
Sbjct:  256 PQSTAQPLCATMESAMHAIGRAIQGATQLSLFGFDVIMES-GSGRH---------------MVIDVNYFPSFKELPDFDARMRTHMK 326          
The following BLAST results are available for this feature:
BLAST of EWM20582.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 9
Match NameE-valueIdentityDescription
gi|585100315|gb|EWM20582.1|3.290e-93100.00hypothetical protein Naga_101460g1, partial [Nanno... [more]
gi|1210530153|dbj|GAX11216.1|1.542e-945.68inositol-1,3,4-trisphosphate 5/6-kinase / inositol... [more]
gi|1072234659|gb|OEU19388.1|3.606e-935.45hypothetical protein FRACYDRAFT_167635 [Fragilario... [more]
gi|669161246|ref|XP_008616185.1|4.566e-838.61hypothetical protein SDRG_11909 [Saprolegnia dicli... [more]
gi|813139303|ref|XP_012198834.1|4.725e-835.54hypothetical protein SPRG_04523 [Saprolegnia paras... [more]
gi|223997760|ref|XP_002288553.1|4.758e-831.25hypothetical protein THAPSDRAFT_261937 [Thalassios... [more]
gi|698822199|ref|XP_009844128.1|7.465e-845.21hypothetical protein H257_17146 [Aphanomyces astac... [more]
gi|1210527546|dbj|GAX13831.1|1.410e-740.70inositol-1,3,4-trisphosphate 5/6-kinase / inositol... [more]
gi|1173932576|gb|OQR84520.1|4.105e-739.08inositol-tetrakisphosphate 1-kinase-like [Achlya h... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10122rna10122Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications