EWM20589.1, cds10085 (CDS) Nannochloropsis gaditana

Overview
NameEWM20589.1
Unique Namecds10085
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037262.1:82126..82170 +
Alignment locationKK037262.1:82216..82380 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20589.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100649g3.9567.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:82126..82170 +
KK037262.1supercontigKK037262.1:82216..82380 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20589.1 vs. NCBI_GenBank
Match: gi|585100328|gb|EWM20589.1| (hypothetical protein Naga_100649g3 [Nannochloropsis gaditana])

HSP 1 Score: 143.665 bits (361), Expect = 1.402e-43
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 
Query:    1 METKPRGVNLFPNFRNAGRTTGAIPAIIGPEVELPAITEPVHPVFWQRNAFCLAHCGCSITNSWTAIRG 69
            METKPRGVNLFPNFRNAGRTTGAIPAIIGPEVELPAITEPVHPVFWQRNAFCLAHCGCSITNSWTAIRG
Sbjct:    1 METKPRGVNLFPNFRNAGRTTGAIPAIIGPEVELPAITEPVHPVFWQRNAFCLAHCGCSITNSWTAIRG 69
The following BLAST results are available for this feature:
BLAST of EWM20589.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100328|gb|EWM20589.1|1.402e-43100.00hypothetical protein Naga_100649g3 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10116rna10116Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications