EWM20592.1, cds10080 (CDS) Nannochloropsis gaditana

Overview
NameEWM20592.1
Unique Namecds10080
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037262.1:74183..74451 -
Alignment locationKK037262.1:73162..74053 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20592.1
Productcytosolic fe-s cluster assembly factor narfl
Orig transcript idgnl|cribi|Naga_100941g1.9037.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:74183..74451 -
KK037262.1supercontigKK037262.1:73162..74053 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR009016Fe_hydrogenase
IPR004108Fe_hydrogenase_lsu_C
Homology
BLAST of EWM20592.1 vs. NCBI_GenBank
Match: gi|585100333|gb|EWM20592.1| (cytosolic fe-s cluster assembly factor narfl [Nannochloropsis gaditana])

HSP 1 Score: 767.303 bits (1980), Expect = 0.000e+0
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0
Query:    1 MASVFLGDLDDVIGPSQACVNPIFATDTSTPPSQRSAAPENEDKGRAQVTVEAAWMDVEEAGGAVKPDLIKATGPGSAASVSLNDCLACSGCVTSAETVLISQQSTDQFLRILRGGRGGQTQALVVALSPQSLASLGVAFGWAAPRLPRRLGSFFKALARRLVAPPNEPLPVHVYSTASAAPVALAEATAEFVARYRHCQPPPPGIALHPPPPSPSPPAWEAPPPSRALSATEDAPHPDLPLGVPAPPPRHQALPMLVSECPGWVCYAEKTTPQVLPLLSTAKSPQQCLGTLVKAVLAPASGLRPGQVCVVAVMPCYDKKLEASRRDFVHAEWGEVPEVDMVLTAGEVGELVREYGPGEEEGCLAWGGGEGGGRRGRPTGPTKGAT 386
            MASVFLGDLDDVIGPSQACVNPIFATDTSTPPSQRSAAPENEDKGRAQVTVEAAWMDVEEAGGAVKPDLIKATGPGSAASVSLNDCLACSGCVTSAETVLISQQSTDQFLRILRGGRGGQTQALVVALSPQSLASLGVAFGWAAPRLPRRLGSFFKALARRLVAPPNEPLPVHVYSTASAAPVALAEATAEFVARYRHCQPPPPGIALHPPPPSPSPPAWEAPPPSRALSATEDAPHPDLPLGVPAPPPRHQALPMLVSECPGWVCYAEKTTPQVLPLLSTAKSPQQCLGTLVKAVLAPASGLRPGQVCVVAVMPCYDKKLEASRRDFVHAEWGEVPEVDMVLTAGEVGELVREYGPGEEEGCLAWGGGEGGGRRGRPTGPTKGAT
Sbjct:    1 MASVFLGDLDDVIGPSQACVNPIFATDTSTPPSQRSAAPENEDKGRAQVTVEAAWMDVEEAGGAVKPDLIKATGPGSAASVSLNDCLACSGCVTSAETVLISQQSTDQFLRILRGGRGGQTQALVVALSPQSLASLGVAFGWAAPRLPRRLGSFFKALARRLVAPPNEPLPVHVYSTASAAPVALAEATAEFVARYRHCQPPPPGIALHPPPPSPSPPAWEAPPPSRALSATEDAPHPDLPLGVPAPPPRHQALPMLVSECPGWVCYAEKTTPQVLPLLSTAKSPQQCLGTLVKAVLAPASGLRPGQVCVVAVMPCYDKKLEASRRDFVHAEWGEVPEVDMVLTAGEVGELVREYGPGEEEGCLAWGGGEGGGRRGRPTGPTKGAT 386          
BLAST of EWM20592.1 vs. NCBI_GenBank
Match: gi|698793230|ref|XP_009829647.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574115214|gb|ETV80700.1| hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 251.906 bits (642), Expect = 1.970e-76
Identity = 170/397 (42.82%), Postives = 211/397 (53.15%), Query Frame = 0
Query:    1 MASVFLGDLDDVIGPSQACVNPIFAT--DTSTPPSQRSAAPENEDKGRAQVTVEAAWMDVEEAGGAVKPDLIKATGPGSAASVSLNDCLACSGCVTSAETVLISQQSTDQFLRILRGGRGGQTQALVVALSPQSLASLGVAFGWAAPRLPRRLGSFFKALARRLVAPPNEPLPVHV-YSTASAAPVALAEATAEFVARYRHCQPPPPGIALHPPPPSPSPPAWEAPPPSRALSATE----DAPHPDLPLGVPAPPPRHQALPMLVSECPGWVCYAEKTTPQVLPLLSTAKSPQQCLGTLVKAVLAPASGLRPGQVCVVAVMPCYDKKLEASRRDFVHAEWGEVPEVDMVLTAGEVGELVREYGPGE-EEGCLA-----WGGGEGGGRRGRPTGPTKG 384
            MASVFLGDLDD I PSQACVNP+F T  D S  P+Q +   +    G  QV +E              P+LI+++   +A  VSLNDCLACSGCVTSAE++LISQQS  +FL  L+  R       VV LSPQ+ AS+   F        R+L ++F+ +             VHV   +A AA +AL EA AEF+ARYRH Q  P                W  PP SR +S+T+    DA   D        PP H ALPML S CPGWVCYAEK+    +P +ST KSPQQ  GTLVK +LA     +P   C   VMPCYDKKLEASR DF+ A   +  +VD VL A E+ +++     G  +E  L      W G   GG     +  T G
Sbjct:    1 MASVFLGDLDDFIAPSQACVNPLFLTGKDKSKEPTQVNLDSDIY-SGIHQVAIE--------------PNLIRSSSQDTAM-VSLNDCLACSGCVTSAESILISQQSAAEFLAALQTHR--HAMQFVVTLSPQARASIAAHFNLPIAVCHRKLVTYFRQIG------------VHVVLDSACAADLALLEARAEFIARYRHRQTLP----------------WSRPPSSRPVSSTQTDYYDAAATD-------EPPAHVALPMLTSSCPGWVCYAEKSNANAIPYISTTKSPQQINGTLVKRLLATG---QPVYHC--TVMPCYDKKLEASRNDFLDAA-TDTRDVDCVLAASELLDMLHGVDLGSLDEATLTSDEVLWSGLASGGTHVLSSSTTSG 338          
BLAST of EWM20592.1 vs. NCBI_GenBank
Match: gi|698793228|ref|XP_009829646.1| (hypothetical protein H257_06201 [Aphanomyces astaci] >gi|574115213|gb|ETV80699.1| hypothetical protein H257_06201 [Aphanomyces astaci])

HSP 1 Score: 251.136 bits (640), Expect = 3.289e-75
Identity = 170/397 (42.82%), Postives = 211/397 (53.15%), Query Frame = 0
Query:    1 MASVFLGDLDDVIGPSQACVNPIFAT--DTSTPPSQRSAAPENEDKGRAQVTVEAAWMDVEEAGGAVKPDLIKATGPGSAASVSLNDCLACSGCVTSAETVLISQQSTDQFLRILRGGRGGQTQALVVALSPQSLASLGVAFGWAAPRLPRRLGSFFKALARRLVAPPNEPLPVHV-YSTASAAPVALAEATAEFVARYRHCQPPPPGIALHPPPPSPSPPAWEAPPPSRALSATE----DAPHPDLPLGVPAPPPRHQALPMLVSECPGWVCYAEKTTPQVLPLLSTAKSPQQCLGTLVKAVLAPASGLRPGQVCVVAVMPCYDKKLEASRRDFVHAEWGEVPEVDMVLTAGEVGELVREYGPGE-EEGCLA-----WGGGEGGGRRGRPTGPTKG 384
            MASVFLGDLDD I PSQACVNP+F T  D S  P+Q +   +    G  QV +E              P+LI+++   +A  VSLNDCLACSGCVTSAE++LISQQS  +FL  L+  R       VV LSPQ+ AS+   F        R+L ++F+ +             VHV   +A AA +AL EA AEF+ARYRH Q  P                W  PP SR +S+T+    DA   D        PP H ALPML S CPGWVCYAEK+    +P +ST KSPQQ  GTLVK +LA     +P   C   VMPCYDKKLEASR DF+ A   +  +VD VL A E+ +++     G  +E  L      W G   GG     +  T G
Sbjct:    1 MASVFLGDLDDFIAPSQACVNPLFLTGKDKSKEPTQVNLDSDIY-SGIHQVAIE--------------PNLIRSSSQDTAM-VSLNDCLACSGCVTSAESILISQQSAAEFLAALQTHR--HAMQFVVTLSPQARASIAAHFNLPIAVCHRKLVTYFRQIG------------VHVVLDSACAADLALLEARAEFIARYRHRQTLP----------------WSRPPSSRPVSSTQTDYYDAAATD-------EPPAHVALPMLTSSCPGWVCYAEKSNANAIPYISTTKSPQQINGTLVKRLLATG---QPVYHCT--VMPCYDKKLEASRNDFLDAA-TDTRDVDCVLAASELLDMLHGVDLGSLDEATLTSDEVLWSGLASGGTHVLSSSTTSG 338          
BLAST of EWM20592.1 vs. NCBI_GenBank
Match: gi|673038762|ref|XP_008873342.1| (hypothetical protein H310_09133 [Aphanomyces invadans] >gi|574470772|gb|ETV97781.1| hypothetical protein H310_09133 [Aphanomyces invadans])

HSP 1 Score: 248.825 bits (634), Expect = 2.969e-74
Identity = 163/362 (45.03%), Postives = 201/362 (55.52%), Query Frame = 0
Query:    1 MASVFLGDLDDVIGPSQACVNPIFATDTSTPPSQRSAAPENEDKGRAQVTVEAAWMDVEEAGG----AVKPDLIKATGPGSAASVSLNDCLACSGCVTSAETVLISQQSTDQFLRILRGGRGGQTQALVVALSPQSLASLGVAFGWAAPRLPRRLGSFFKALARRLVAPPNEPLPVHV-YSTASAAPVALAEATAEFVARYRHCQPPPPGIALHPPPPSPSPPAWEAPPPSRALSATE----DAPHPDLPLGVPAPPPRHQALPMLVSECPGWVCYAEKTTPQVLPLLSTAKSPQQCLGTLVKAVLAPASGLRPGQVCVVAVMPCYDKKLEASRRDFVHAEWGEVPEVDMVLTAGEVGELVR 353
            MASVFLGDLDD I PSQACVNP+F T              N+DK +A   V    MD +   G    A++PDLI++T   +A  VSLNDCLACSGCVTSAE++LISQQS  +FL  L   R       VV LSPQ+ AS+   F        R+L ++F+ L             VHV    A A  +AL EA AEFVARYR+ Q  P                W  PP SR +S+T+    DA   D        PP H ALPML S CPGW+CYAEK+ P  LP +ST KSPQQ  GTLVK +++    + P   C   VMPCYDKKLEASR +F+ A   +  +VD VL A E+ E+++
Sbjct:    1 MASVFLGDLDDFIAPSQACVNPLFLT--------------NKDKSKAPAHVN---MDSDIYSGIHQVAIEPDLIRSTNQDTAM-VSLNDCLACSGCVTSAESILISQQSAAEFLTALETHR--HDWQFVVTLSPQARASVAAHFNLPLAACHRKLVTYFRQLG------------VHVVLDAACADDLALLEARAEFVARYRNRQTLP----------------WTRPPSSRPVSSTQTDYYDAAATD-------EPPSHVALPMLTSSCPGWICYAEKSNPNALPYISTTKSPQQINGTLVKRLISAGQHM-PVYHCT--VMPCYDKKLEASRNNFLDAA-TDTRDVDCVLAASELLEMLQ 303          
BLAST of EWM20592.1 vs. NCBI_GenBank
Match: gi|669150146|ref|XP_008610635.1| (hypothetical protein SDRG_06623 [Saprolegnia diclina VS20] >gi|530737631|gb|EQC35873.1| hypothetical protein SDRG_06623 [Saprolegnia diclina VS20])

HSP 1 Score: 243.432 bits (620), Expect = 2.695e-72
Identity = 156/356 (43.82%), Postives = 203/356 (57.02%), Query Frame = 0
Query:    1 MASVFLGDLDDVIGPSQACVNPIFATDTSTPPSQRSAAPENEDKGRAQVTVEA-AWMDVEEAGGAVKPDLIKATGPGSAASVSLNDCLACSGCVTSAETVLISQQSTDQFLRILRGGRGGQTQALVVALSPQSLASLGVAFGWAAPRLPRRLGSFFKALARRLVAPPNEPLPVHV-YSTASAAPVALAEATAEFVARYRHCQPPPPGIALHPPPPSPSPPAWEAPPPSRALSATEDAPHPDLPLGVPAPPPRHQALPMLVSECPGWVCYAEKTTPQVLPLLSTAKSPQQCLGTLVKAVLAPASGLRPGQVCVVAVMPCYDKKLEASRRDFVHAEWGEVPEVDMVLTAGEVGELVRE 354
            MASVFLGDL+D I PSQACVNP+F             A +  ++ +A+V++++  +  + +   A++PDLIK++   +A  VSLNDCLACSGCVTSAET+LISQQS  +F R     R       VV +SPQ+ AS+ V F  +A     +L +FF++L             VHV   T  +A +AL EA AEFV R R+    P                W+ PP SRA+S+TE        L   A PP H ALPML S CPGWVCYAEK+    LP +ST KSPQQ  GTLVK + +  +     +V    VMPCYDKKLEASR DF+ A   +  +VD VL A EV +++ E
Sbjct:    1 MASVFLGDLNDFIQPSQACVNPLFL------------AGKQAEESKAKVSLDSDIYSGIHQV--AIEPDLIKSSAADTAM-VSLNDCLACSGCVTSAETILISQQSAQEF-RAALAARAHDK--FVVTISPQARASIAVRFNLSAHAAHLKLVTFFRSLG------------VHVVLDTMGSADIALLEARAEFVTRLRNQSSVP----------------WKRPPSSRAVSSTETEY-----LEAGAEPPSHVALPMLTSACPGWVCYAEKSNANALPYISTTKSPQQITGTLVKRLFSQPT----DRVYHATVMPCYDKKLEASRNDFLDAA-TDTRDVDCVLAASEVLDMLLE 300          
BLAST of EWM20592.1 vs. NCBI_GenBank
Match: gi|813142405|ref|XP_012199280.1| (hypothetical protein SPRG_05290 [Saprolegnia parasitica CBS 223.65] >gi|641536203|gb|KDO30099.1| hypothetical protein SPRG_05290 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 241.506 bits (615), Expect = 1.616e-71
Identity = 158/356 (44.38%), Postives = 195/356 (54.78%), Query Frame = 0
Query:    1 MASVFLGDLDDVIGPSQACVNPIFATDTSTPPSQRSAAPENE-DKGRAQVTVEAAWMDVEEAGGAVKPDLIKATGPGSAASVSLNDCLACSGCVTSAETVLISQQSTDQFLRILRGGRGGQTQALVVALSPQSLASLGVAFGWAAPRLPRRLGSFFKALARRLVAPPNEPLPVHV-YSTASAAPVALAEATAEFVARYRHCQPPPPGIALHPPPPSPSPPAWEAPPPSRALSATEDAPHPDLPLGVPAPPPRHQALPMLVSECPGWVCYAEKTTPQVLPLLSTAKSPQQCLGTLVKAVLAPASGLRPGQVCVVAVMPCYDKKLEASRRDFVHAEWGEVPEVDMVLTAGEVGELVRE 354
            MASVFLGDL+D I PSQACVNP+F        S+ + + +++   G  QV +E              PDLIK++   +A  VSLNDCLACSGCVTSAET+LISQQS  +F R     R       VV +SPQ+ AS+ V F   A     +L SFF++L             VHV   T  +A +AL EA  EFV R R+    P                W+ PP SRA+S+TE        L   A PP H ALPML S CPGWVCYAEK+    LP +ST KSPQQ  GTLVK + +  +     +V    VMPCYDKKLEASR DF+ A   E  +VD VL A EV +++ E
Sbjct:    1 MASVFLGDLNDFIQPSQACVNPLFLAGKQAEESKATVSLDSDIYSGIHQVAIE--------------PDLIKSSAADTAM-VSLNDCLACSGCVTSAETILISQQSAQEF-RAALAARAHDK--FVVTISPQARASIAVRFNLTAHAAHLKLVSFFRSLG------------VHVVLDTTGSADIALLEARTEFVTRLRNQTLVP----------------WKRPPSSRAVSSTETEY-----LEAGAEPPAHVALPMLTSACPGWVCYAEKSNANALPYISTTKSPQQITGTLVKRLFSQPT----DRVYHATVMPCYDKKLEASRNDFLDAA-TETRDVDCVLAASEVLDMLVE 300          
BLAST of EWM20592.1 vs. NCBI_GenBank
Match: gi|301103566|ref|XP_002900869.1| (nuclear prelamin A recognition factor-like protein [Phytophthora infestans T30-4] >gi|262101624|gb|EEY59676.1| nuclear prelamin A recognition factor-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 236.498 bits (602), Expect = 4.528e-71
Identity = 153/359 (42.62%), Postives = 202/359 (56.27%), Query Frame = 0
Query:    1 MASVFLGDLDDVIGPSQACVNPIFATDTSTPPSQRSAAPENEDKGRAQVTVEAAWMDVEEAGGAV----KPDLIKATGPGSAASVSLNDCLACSGCVTSAETVLISQQSTDQFLRILRGGRGGQTQALVVALSPQSLASLGVAFGWAAPRLPRRLGSFFKALARRLVAPPNEPLPVHVYSTASAAPVALAEATAEFVARYRHCQPPPPGIALHPPPPSPSPPAWEAPPPSRALSATEDAPHPDLPLGVPAPPPRH--QALPMLVSECPGWVCYAEKTTPQVLPLLSTAKSPQQCLGTLVKAVLAPASGLRPGQVCVVAVMPCYDKKLEASRRDFVHAEWGEVPEVDMVLTAGEVGELVR 353
            MASVFLGDL+D I PSQACVNP+F +D S      S    N   G A++T+E    ++  A  AV    KP++I+ T     A++SL+DCLACSGCVTSAETVLISQQS  + L +L      + + +VV LSPQS ASL   F      + R+L + F+ L   LV          + ST S    AL E+ AEF+ RYR+ Q                   W  PP S A+S+   A    L     A P +   +A+PML S CPGW+CYAEK+ P  +P + T KSPQQ  G+++K  ++   G++P +V  VAVMPC+DKKLEASR+DF  AE     +VD VL   E+ EL+ 
Sbjct:    1 MASVFLGDLNDYIQPSQACVNPLFTSDKS-----ESNGSSN---GLAKITLET---ELSAADFAVPQPVKPNIIRTTTQ-EKATISLDDCLACSGCVTSAETVLISQQSFKEMLDVLATK---EHKRVVVTLSPQSRASLAAHFEMPVVAVHRKLVTLFRNLGVTLV----------IDSTCSG-DFALLESRAEFLHRYRNHQKT----------------IWARPPSSVAVSS---AKTEFLEPSTTANPLQDPLRAMPMLASSCPGWICYAEKSQPNAIPFIDTTKSPQQIAGSIIKRFVSGEHGVKPSEVYHVAVMPCFDKKLEASRKDFQDAE-DATKDVDCVLATTEIIELIE 313          
BLAST of EWM20592.1 vs. NCBI_GenBank
Match: gi|570971059|gb|ETP34178.1| (hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 233.032 bits (593), Expect = 1.031e-69
Identity = 152/360 (42.22%), Postives = 198/360 (55.00%), Query Frame = 0
Query:    1 MASVFLGDLDDVIGPSQACVNPIFATDTSTPPSQRSAAPENE--DKGRAQVTVEAAWMDVEEAGGAV----KPDLIKATGPGSAASVSLNDCLACSGCVTSAETVLISQQSTDQFLRILRGGRGGQTQALVVALSPQSLASLGVAFGWAAPRLPRRLGSFFKALARRLVAPPNEPLPVHVYSTASAAPVALAEATAEFVARYRHCQPPPPGIALHPPPPSPSPPAWEAPPPSRALS-ATEDAPHPDLPLGVPAPPPRHQALPMLVSECPGWVCYAEKTTPQVLPLLSTAKSPQQCLGTLVKAVLAPASGLRPGQVCVVAVMPCYDKKLEASRRDFVHAEWGEVPEVDMVLTAGEVGELVR 353
            MASVFLGDL+D I PSQACVNP+F           S  PE      G A++T+E    ++  A  AV    KP++I+ T     A++SL+DCLACSGCVTSAETVLISQQS  + L +L   +  +   +VV LSPQS ASL   F      + R+L + F+ L   LV          + ST S    AL E+ AEF+ RY + Q                   W  PP S A+S A  +   P         P R  A+PMLVS CPGW+CYAEK+ P  +P + T KSPQQ  G+++K  ++   G++P +V  VAVMPC+DKKLEASR+DF  AE     +VD VL   E+ EL+ 
Sbjct:    1 MASVFLGDLNDYIQPSQACVNPLFT----------SGKPEGNGNSNGLAKITLET---ELSAADFAVPQPLKPNIIRTTTQ-EKATISLDDCLACSGCVTSAETVLISQQSYKEMLDVLAAKKHKR---VVVTLSPQSRASLAAHFDMPVIAVHRKLVTLFRNLGVTLV----------IDSTCSG-DFALLESRAEFLHRYGNQQKT----------------IWARPPSSVAVSSAKTEYLEPSTSTNPLQDPLR--AMPMLVSSCPGWICYAEKSQPNAIPFIDTTKSPQQIAGSIIKRFVSGEHGVKPSEVYHVAVMPCFDKKLEASRKDFQDAE-DATKDVDCVLATTEIIELIE 313          
BLAST of EWM20592.1 vs. NCBI_GenBank
Match: gi|566013306|gb|ETI36217.1| (hypothetical protein, variant [Phytophthora parasitica P1569] >gi|568008925|gb|ETL83139.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568038847|gb|ETM36362.1| hypothetical protein, variant [Phytophthora parasitica] >gi|570940812|gb|ETP06069.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1])

HSP 1 Score: 233.032 bits (593), Expect = 1.065e-69
Identity = 151/360 (41.94%), Postives = 198/360 (55.00%), Query Frame = 0
Query:    1 MASVFLGDLDDVIGPSQACVNPIFATDTSTPPSQRSAAPENE--DKGRAQVTVEAAWMDVEEAGGAV----KPDLIKATGPGSAASVSLNDCLACSGCVTSAETVLISQQSTDQFLRILRGGRGGQTQALVVALSPQSLASLGVAFGWAAPRLPRRLGSFFKALARRLVAPPNEPLPVHVYSTASAAPVALAEATAEFVARYRHCQPPPPGIALHPPPPSPSPPAWEAPPPSRALS-ATEDAPHPDLPLGVPAPPPRHQALPMLVSECPGWVCYAEKTTPQVLPLLSTAKSPQQCLGTLVKAVLAPASGLRPGQVCVVAVMPCYDKKLEASRRDFVHAEWGEVPEVDMVLTAGEVGELVR 353
            MASVFLGDL+D I PSQACVNP+F +D           PE      G A++T+E    ++  A  AV    KP++I+ T     A++SL+DCLACSGCVTSAETVLISQQS  + L +L   +  +   +VV LSPQS ASL   F      + R+L + F+ L   LV          + ST S    AL E+ AEF+ RY + Q                   W  PP S A+S A  +   P         P R  A+PML S CPGW+CYAEK+ P  +P + T KSPQQ  G+++K  ++   G++P +V  VAVMPC+DKKLEASR+DF  AE     +VD VL   E+ EL+ 
Sbjct:    1 MASVFLGDLNDYIQPSQACVNPLFTSD----------KPEGNGNSNGLAKITLET---ELSAADFAVPQPLKPNIIRTTTQ-EKATISLDDCLACSGCVTSAETVLISQQSYKEMLDVLAAKKHKR---VVVTLSPQSRASLAAHFDMPVIAVHRKLVTLFRNLGVTLV----------IDSTCSG-DFALLESRAEFLHRYGNQQKT----------------IWARPPSSVAVSSAKTEYLEPSTSTNPLQDPLR--AMPMLASSCPGWICYAEKSQPNAIPFIDTTKSPQQIAGSIIKRFVSGEHGVKPSEVYHVAVMPCFDKKLEASRKDFQDAE-DATKDVDCVLATTEIIELIE 313          
BLAST of EWM20592.1 vs. NCBI_GenBank
Match: gi|567950763|gb|ETK76471.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|567979430|gb|ETL29909.1| hypothetical protein, variant [Phytophthora parasitica] >gi|570317018|gb|ETO64966.1| hypothetical protein, variant [Phytophthora parasitica P1976])

HSP 1 Score: 233.032 bits (593), Expect = 1.173e-69
Identity = 151/360 (41.94%), Postives = 198/360 (55.00%), Query Frame = 0
Query:    1 MASVFLGDLDDVIGPSQACVNPIFATDTSTPPSQRSAAPENE--DKGRAQVTVEAAWMDVEEAGGAV----KPDLIKATGPGSAASVSLNDCLACSGCVTSAETVLISQQSTDQFLRILRGGRGGQTQALVVALSPQSLASLGVAFGWAAPRLPRRLGSFFKALARRLVAPPNEPLPVHVYSTASAAPVALAEATAEFVARYRHCQPPPPGIALHPPPPSPSPPAWEAPPPSRALS-ATEDAPHPDLPLGVPAPPPRHQALPMLVSECPGWVCYAEKTTPQVLPLLSTAKSPQQCLGTLVKAVLAPASGLRPGQVCVVAVMPCYDKKLEASRRDFVHAEWGEVPEVDMVLTAGEVGELVR 353
            MASVFLGDL+D I PSQACVNP+F +D           PE      G A++T+E    ++  A  AV    KP++I+ T     A++SL+DCLACSGCVTSAETVLISQQS  + L +L   +  +   +VV LSPQS ASL   F      + R+L + F+ L   LV          + ST S    AL E+ AEF+ RY + Q                   W  PP S A+S A  +   P         P R  A+PML S CPGW+CYAEK+ P  +P + T KSPQQ  G+++K  ++   G++P +V  VAVMPC+DKKLEASR+DF  AE     +VD VL   E+ EL+ 
Sbjct:    1 MASVFLGDLNDYIQPSQACVNPLFTSD----------KPEGNGNSNGLAKITLET---ELSAADFAVPQPVKPNIIRTTTQ-EKATISLDDCLACSGCVTSAETVLISQQSYKEMLDVLAAKKHKR---VVVTLSPQSRASLAAHFDMPVIAVHRKLVTLFRNLGVTLV----------IDSTCSG-DFALLESRAEFLHRYGNQQKT----------------IWARPPSSVAVSSAKTEYLEPSTSTNPLQDPLR--AMPMLASSCPGWICYAEKSQPNAIPFIDTTKSPQQIAGSIIKRFVSGEHGVKPSEVYHVAVMPCFDKKLEASRKDFQDAE-DATKDVDCVLATTEIIELIE 313          
The following BLAST results are available for this feature:
BLAST of EWM20592.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100333|gb|EWM20592.1|0.000e+0100.00cytosolic fe-s cluster assembly factor narfl [Nann... [more]
gi|698793230|ref|XP_009829647.1|1.970e-7642.82hypothetical protein, variant [Aphanomyces astaci]... [more]
gi|698793228|ref|XP_009829646.1|3.289e-7542.82hypothetical protein H257_06201 [Aphanomyces astac... [more]
gi|673038762|ref|XP_008873342.1|2.969e-7445.03hypothetical protein H310_09133 [Aphanomyces invad... [more]
gi|669150146|ref|XP_008610635.1|2.695e-7243.82hypothetical protein SDRG_06623 [Saprolegnia dicli... [more]
gi|813142405|ref|XP_012199280.1|1.616e-7144.38hypothetical protein SPRG_05290 [Saprolegnia paras... [more]
gi|301103566|ref|XP_002900869.1|4.528e-7142.62nuclear prelamin A recognition factor-like protein... [more]
gi|570971059|gb|ETP34178.1|1.031e-6942.22hypothetical protein, variant [Phytophthora parasi... [more]
gi|566013306|gb|ETI36217.1|1.065e-6941.94hypothetical protein, variant [Phytophthora parasi... [more]
gi|567950763|gb|ETK76471.1|1.173e-6941.94hypothetical protein, variant [Phytophthora parasi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10111rna10111Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications