EWM20597.1, cds10076 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20597.1 vs. NCBI_GenBank
Match: gi|585100341|gb|EWM20597.1| (citrate lyase beta subunit [Nannochloropsis gaditana]) HSP 1 Score: 301.982 bits (772), Expect = 7.607e-104 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
Query: 1 MGIWAMVETPAAVMNIKEIARSANFVPRLEALMMGTSDLTNELHALHHPDRVPLLYSLSSCLVAARAFKLRVIDGVHLNLNDPNGFAAACAQGRALGFDGKSLIHPKTVAEANKAFGPRPDELAHAERVLTAWREAQAHGEAIPCLG 147
MGIWAMVETPAAVMNIKEIARSANFVPRLEALMMGTSDLTNELHALHHPDRVPLLYSLSSCLVAARAFKLRVIDGVHLNLNDPNGFAAACAQGRALGFDGKSLIHPKTVAEANKAFGPRPDELAHAERVLTAWREAQAHGEAIPCLG
Sbjct: 1 MGIWAMVETPAAVMNIKEIARSANFVPRLEALMMGTSDLTNELHALHHPDRVPLLYSLSSCLVAARAFKLRVIDGVHLNLNDPNGFAAACAQGRALGFDGKSLIHPKTVAEANKAFGPRPDELAHAERVLTAWREAQAHGEAIPCLG 147
BLAST of EWM20597.1 vs. NCBI_GenBank
Match: gi|764604423|ref|WP_044427587.1| (CoA ester lyase [Skermanella aerolata] >gi|763835493|gb|KJB95943.1| (3S)-malyl-CoA thiolesterase [Skermanella aerolata KACC 11604]) HSP 1 Score: 167.933 bits (424), Expect = 6.657e-49 Identity = 79/141 (56.03%), Postives = 106/141 (75.18%), Query Frame = 0
Query: 3 IWAMVETPAAVMNIKEIARSANFVPRLEALMMGTSDLTNELHALHHPDRVPLLYSLSSCLVAARAFKLRVIDGVHLNLNDPNGFAAACAQGRALGFDGKSLIHPKTVAEANKAFGPRPDELAHAERVLTAWREAQAHGEAI 143
IW M+ETP A++N KEIA ++ PRL A +MGTSDL +LHA H DR+P++ SL CL+AARA+ L ++DGV+L+LND GFAA+C QG LGFDGK+LIHPKT+A N AFGP DE+AH+ R++ A++ A A G+ +
Sbjct: 123 IWCMMETPLAMLNAKEIAGAS---PRLGAFVMGTSDLAKDLHAAHTRDRLPMITSLGLCLLAARAYGLAILDGVYLDLNDDEGFAASCRQGVELGFDGKTLIHPKTLAATNAAFGPSTDEVAHSRRIIDAFQAAVAEGKGV 260
BLAST of EWM20597.1 vs. NCBI_GenBank
Match: gi|739592527|ref|WP_037450120.1| (CoA ester lyase [Skermanella stibiiresistens] >gi|587642191|gb|EWY41203.1| (3S)-malyl-CoA thiolesterase [Skermanella stibiiresistens SB22]) HSP 1 Score: 166.007 bits (419), Expect = 3.780e-48 Identity = 78/141 (55.32%), Postives = 105/141 (74.47%), Query Frame = 0
Query: 3 IWAMVETPAAVMNIKEIARSANFVPRLEALMMGTSDLTNELHALHHPDRVPLLYSLSSCLVAARAFKLRVIDGVHLNLNDPNGFAAACAQGRALGFDGKSLIHPKTVAEANKAFGPRPDELAHAERVLTAWREAQAHGEAI 143
IW M+ETP A++N+KEIA + PRL L+MGTSDL +LHA H DR+P++ SL CL+AARA+ L ++DGV+L+LND GFAA+C QG LGFDGK+LIHPKT+A AN AFGP +E+A + R + A++ A A G+ +
Sbjct: 123 IWCMMETPLAMLNVKEIAGA---TPRLGGLVMGTSDLAKDLHAAHTRDRLPMITSLGLCLLAARAYGLAILDGVYLDLNDDEGFAASCRQGVELGFDGKTLIHPKTLAAANAAFGPSAEEVAQSRRFIEAFQAASAEGKGV 260
BLAST of EWM20597.1 vs. NCBI_GenBank
Match: gi|1056027710|ref|WP_067555970.1| (CoA ester lyase [Oceanibaculum pacificum] >gi|1016462982|gb|KZD08281.1| malyl-CoA thiolesterase [Oceanibaculum pacificum]) HSP 1 Score: 162.925 bits (411), Expect = 5.597e-47 Identity = 75/143 (52.45%), Postives = 104/143 (72.73%), Query Frame = 0
Query: 1 MGIWAMVETPAAVMNIKEIARSANFVPRLEALMMGTSDLTNELHALHHPDRVPLLYSLSSCLVAARAFKLRVIDGVHLNLNDPNGFAAACAQGRALGFDGKSLIHPKTVAEANKAFGPRPDELAHAERVLTAWREAQAHGEAI 143
+ IW M+ETP A+++ K+IAR+ PRL +MGTSDL +L ALH PDR+P + SL CL+AARA+ L ++DGV+L+L D GFAAAC QGR +GFDGK+LIHPKT+A AN+ F P DE+A + +++ A EA+ G+ +
Sbjct: 121 LAIWCMMETPLAMLDAKDIARA---TPRLGGFVMGTSDLAKDLGALHTPDRLPFVTSLGLCLLAARAYGLAILDGVYLDLTDEEGFAAACRQGREMGFDGKTLIHPKTIAAANQVFAPSADEIAWSRKIIAAHAEAERQGKGV 260
BLAST of EWM20597.1 vs. NCBI_GenBank
Match: gi|737707011|ref|WP_035675857.1| (CoA ester lyase [Azospirillum brasilense] >gi|938486291|gb|ALJ34388.1| malyl-CoA thiolesterase [Azospirillum brasilense] >gi|1159216798|gb|OPH14317.1| malyl-CoA thiolesterase [Azospirillum brasilense] >gi|1159225565|gb|OPH22582.1| malyl-CoA thiolesterase [Azospirillum brasilense]) HSP 1 Score: 162.925 bits (411), Expect = 6.009e-47 Identity = 78/141 (55.32%), Postives = 103/141 (73.05%), Query Frame = 0
Query: 3 IWAMVETPAAVMNIKEIARSANFVPRLEALMMGTSDLTNELHALHHPDRVPLLYSLSSCLVAARAFKLRVIDGVHLNLNDPNGFAAACAQGRALGFDGKSLIHPKTVAEANKAFGPRPDELAHAERVLTAWREAQAHGEAI 143
IW M+ETP ++N +EIA ++ P+L L+MGTSDL +LHA H DR+P+L SL CL+AARA+ L ++DGVHL+LND GFA +CAQGR LGFDGK+LIHPKT+A N AF P +E+A A R++ A EA A G+ +
Sbjct: 123 IWCMMETPLGMLNAREIAGAS---PKLGGLVMGTSDLAKDLHAAHTRDRLPMLTSLGLCLLAARAYGLAILDGVHLDLNDDAGFADSCAQGRELGFDGKTLIHPKTIAACNAAFAPSEEEVAQAHRIIQAHAEAVAQGKGV 260
BLAST of EWM20597.1 vs. NCBI_GenBank
Match: gi|504007648|ref|WP_014241642.1| (CoA ester lyase [Azospirillum brasilense] >gi|356878584|emb|CCC99471.1| citrate lyase, beta subunit [Azospirillum brasilense Sp245]) HSP 1 Score: 162.155 bits (409), Expect = 8.979e-47 Identity = 77/141 (54.61%), Postives = 101/141 (71.63%), Query Frame = 0
Query: 3 IWAMVETPAAVMNIKEIARSANFVPRLEALMMGTSDLTNELHALHHPDRVPLLYSLSSCLVAARAFKLRVIDGVHLNLNDPNGFAAACAQGRALGFDGKSLIHPKTVAEANKAFGPRPDELAHAERVLTAWREAQAHGEAI 143
IW M+ETP ++N KEIA ++ P+L L+MGTSDL +LHA H DR+P+L SL CL+AARA+ L ++DGVHL+LND GF +C QGR LGFDGK+LIHPKT+A N AF P +E+A A R++ A EA A G+ +
Sbjct: 123 IWCMMETPLGMLNTKEIAGAS---PKLGGLVMGTSDLAKDLHAAHTRDRLPMLTSLGLCLLAARAYGLAILDGVHLDLNDDAGFGESCVQGRELGFDGKTLIHPKTIAACNAAFAPSEEEVAQAHRIIQAHAEAVAQGKGV 260
BLAST of EWM20597.1 vs. NCBI_GenBank
Match: gi|1027698484|ref|WP_063634048.1| (CoA ester lyase [Azospirillum humicireducens] >gi|1026294615|gb|ANC90954.1| malyl-CoA thiolesterase [Azospirillum humicireducens]) HSP 1 Score: 160.614 bits (405), Expect = 3.293e-46 Identity = 76/141 (53.90%), Postives = 101/141 (71.63%), Query Frame = 0
Query: 3 IWAMVETPAAVMNIKEIARSANFVPRLEALMMGTSDLTNELHALHHPDRVPLLYSLSSCLVAARAFKLRVIDGVHLNLNDPNGFAAACAQGRALGFDGKSLIHPKTVAEANKAFGPRPDELAHAERVLTAWREAQAHGEAI 143
IW M+ETP ++N KEIA ++ P + L++GTSDL +LHA H R+P++ SL CL+AARA+ L V+DGVHL+LND GFAA+C QGR LGFDGK+LIHPKT+ N AF P DE+AHA R++ A EA + G+ +
Sbjct: 123 IWCMMETPLGILNAKEIAGAS---PAVGGLVLGTSDLAKDLHAAHTAQRLPMITSLGLCLLAARAYGLAVLDGVHLDLNDDEGFAASCRQGRELGFDGKTLIHPKTITACNAAFAPDADEIAHAHRIIAAHAEAASSGKGV 260
BLAST of EWM20597.1 vs. NCBI_GenBank
Match: gi|654397656|ref|WP_027873732.1| (CoA ester lyase [Spongiibacter marinus]) HSP 1 Score: 159.458 bits (402), Expect = 1.049e-45 Identity = 80/140 (57.14%), Postives = 99/140 (70.71%), Query Frame = 0
Query: 1 MGIWAMVETPAAVMNIKEIARSANFVPRLEALMMGTSDLTNELHALHHPDRVPLLYSLSSCLVAARAFKLRVIDGVHLNLNDPNGFAAACAQGRALGFDGKSLIHPKTVAEANKAFGPRPDELAHAERVLTAWREAQAHG 140
+ +WAM ETP V+ I EIA S + RLEA++MGTSDL EL H PDR+ L SLS C++AARA L V+DGVHLNL+D GF AC QG LGFDGK+LIHPK +A AN+AFGP +LA A+++ AW EA+A G
Sbjct: 119 LKLWAMAETPRGVLAIDEIAGSHS---RLEAIVMGTSDLAKELRVPHTPDRLGLQASLSQCVLAARAHGLDVLDGVHLNLDDEAGFVQACEQGVQLGFDGKTLIHPKQIAAANEAFGPSDQQLAQAKKIHQAWVEAEAQG 255
BLAST of EWM20597.1 vs. NCBI_GenBank
Match: gi|653035848|ref|WP_027287536.1| (CoA ester lyase [Rhodovibrio salinarum]) HSP 1 Score: 159.073 bits (401), Expect = 1.819e-45 Identity = 76/146 (52.05%), Postives = 101/146 (69.18%), Query Frame = 0
Query: 1 MGIWAMVETPAAVMNIKEIARSANFVPRLEALMMGTSDLTNELHALHHPDRVPLLYSLSSCLVAARAFKLRVIDGVHLNLNDPNGFAAACAQGRALGFDGKSLIHPKTVAEANKAFGPRPDELAHAERVLTAWREAQAHGEAIPCL 146
M IW M+ETP V+N +EIA +++ RL +MGTSDL +LHA H DR P+L +LS C++AARA+ ++DGVHL+LND G A C QGRALG DGK+LIHPKTV AN+ F P +++A+A R++ A EAQ GE + L
Sbjct: 123 MAIWTMIETPKGVLNAQEIAAASD---RLAVFVMGTSDLVKDLHAEHTNDRQPVLSALSWCVLAARAYGRAIVDGVHLDLNDDEGLEAHCRQGRALGMDGKTLIHPKTVETANRVFAPSEEQIAYARRIIEAHAEAQRRGEGVAVL 265
BLAST of EWM20597.1 vs. NCBI_GenBank
Match: gi|504013115|ref|WP_014247109.1| (CoA ester lyase [Azospirillum lipoferum] >gi|357423219|emb|CBS86065.1| citryl-CoA lyase [Azospirillum lipoferum 4B]) HSP 1 Score: 158.688 bits (400), Expect = 2.515e-45 Identity = 80/141 (56.74%), Postives = 103/141 (73.05%), Query Frame = 0
Query: 3 IWAMVETPAAVMNIKEIARSANFVPRLEALMMGTSDLTNELHALHHPDRVPLLYSLSSCLVAARAFKLRVIDGVHLNLNDPNGFAAACAQGRALGFDGKSLIHPKTVAEANKAFGPRPDELAHAERVLTAWREAQAHGEAI 143
IW M+ETP V+N KEIA ++ P + AL++GTSDL +LHA H R+P++ SL CL+AARA+ L V+DGVHL+LND GFAA+C QGR LGFDGK+LIHPKT+A N AF P DE+AHA R++ A EA A G+ +
Sbjct: 123 IWCMMETPLGVLNAKEIAGAS---PAVGALVLGTSDLAKDLHAAHTAQRLPMITSLGLCLLAARAYGLAVLDGVHLDLNDDEGFAASCRQGRELGFDGKTLIHPKTIAACNAAFAPDADEIAHAHRIIAAHAEAAASGKGV 260 The following BLAST results are available for this feature:
BLAST of EWM20597.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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