EWM20601.1, cds10072 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20601.1 vs. NCBI_GenBank
Match: gi|585100353|gb|EWM20601.1| (biotin synthase, partial [Nannochloropsis gaditana]) HSP 1 Score: 403.29 bits (1035), Expect = 4.840e-142 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
Query: 1 TTPPFLPSSLPPSLPPSLPPRSYQDRLDTLSAVRDAGLHVCSGGILGLGEAAADRIGLLHTLATLPQHPESVPINALVAVEGTRLESNRSPSVFDMGRMIATARVVMPRTMVRLSAGRLSFSAGEQALLFFAGANSIFNGDVLLTTPNPAFTADAALFDTLGLVGKKAHVPAKETPYPVEREGGREGGREEGVVVTRSARQAA 203
TTPPFLPSSLPPSLPPSLPPRSYQDRLDTLSAVRDAGLHVCSGGILGLGEAAADRIGLLHTLATLPQHPESVPINALVAVEGTRLESNRSPSVFDMGRMIATARVVMPRTMVRLSAGRLSFSAGEQALLFFAGANSIFNGDVLLTTPNPAFTADAALFDTLGLVGKKAHVPAKETPYPVEREGGREGGREEGVVVTRSARQAA
Sbjct: 1 TTPPFLPSSLPPSLPPSLPPRSYQDRLDTLSAVRDAGLHVCSGGILGLGEAAADRIGLLHTLATLPQHPESVPINALVAVEGTRLESNRSPSVFDMGRMIATARVVMPRTMVRLSAGRLSFSAGEQALLFFAGANSIFNGDVLLTTPNPAFTADAALFDTLGLVGKKAHVPAKETPYPVEREGGREGGREEGVVVTRSARQAA 203
BLAST of EWM20601.1 vs. NCBI_GenBank
Match: gi|673038720|ref|XP_008873321.1| (biotin synthase [Aphanomyces invadans] >gi|574470751|gb|ETV97760.1| biotin synthase [Aphanomyces invadans]) HSP 1 Score: 224.172 bits (570), Expect = 5.392e-69 Identity = 110/168 (65.48%), Postives = 129/168 (76.79%), Query Frame = 0
Query: 15 PPSLPPRSYQDRLDTLSAVRDAGLHVCSGGILGLGEAAADRIGLLHTLATLPQHPESVPINALVAVEGTRLESNRSPSV--FDMGRMIATARVVMPRTMVRLSAGRLSFSAGEQALLFFAGANSIFNGDVLLTTPNPAFTADAALFDTLGLVGKKAHVPAKETPYPVE 180
P + R+Y DRL+T++ VR AG+ VC GGILG+GE DRI LLHTLAT+ +HPESVP+NALV+V GT L S P V FDM R IATAR++MP+TMVRLSAGR+SFS EQ LLF AGANSIFNGD LLTT NPAF D ALF LGLVGK +HV +K+TPY V+
Sbjct: 194 PNVISTRTYDDRLNTIANVRKAGISVCCGGILGIGEKEHDRIALLHTLATMEEHPESVPVNALVSVAGTPLASEELPPVTAFDMARAIATARILMPKTMVRLSAGRMSFSDAEQGLLFMAGANSIFNGDTLLTTANPAFEKDNALFADLGLVGKPSHVASKKTPYVVK 361
BLAST of EWM20601.1 vs. NCBI_GenBank
Match: gi|299115741|emb|CBN74306.1| (biotin synthase [Ectocarpus siliculosus]) HSP 1 Score: 224.942 bits (572), Expect = 6.836e-69 Identity = 112/158 (70.89%), Postives = 125/158 (79.11%), Query Frame = 0
Query: 15 PPSLPPRSYQDRLDTLSAVRDAGLHVCSGGILGLGEAAADRIGLLHTLATLPQHPESVPINALVAVEGTRLESN---RSPSVFDMGRMIATARVVMPRTMVRLSAGRLSFSAGEQALLFFAGANSIFNGDVLLTTPNPAFTADAALFDTLGLVGKKAH 169
P + RSY+DRL+T+S VR+AG+ VC GGILGLGE DR+GLLHTLATL +HPESVPINALVAVEGT L +P ++DMGRMIATARVVMPRTMVRLSAGRLSFS EQA++F AGANSIF GD LLTT NP F AD ALF LGL GK AH
Sbjct: 217 PSVITTRSYEDRLETISNVREAGISVCCGGILGLGEEENDRVGLLHTLATLEEHPESVPINALVAVEGTPLADEGKADTPDIWDMGRMIATARVVMPRTMVRLSAGRLSFSEAEQAMMFMAGANSIFTGDRLLTTSNPEFDADKALFAKLGLNGKPAH 374
BLAST of EWM20601.1 vs. NCBI_GenBank
Match: gi|813134492|ref|XP_012198171.1| (hypothetical protein SPRG_04175 [Saprolegnia parasitica CBS 223.65] >gi|641537124|gb|KDO30987.1| hypothetical protein SPRG_04175 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 223.402 bits (568), Expect = 7.240e-69 Identity = 106/168 (63.10%), Postives = 131/168 (77.98%), Query Frame = 0
Query: 15 PPSLPPRSYQDRLDTLSAVRDAGLHVCSGGILGLGEAAADRIGLLHTLATLPQHPESVPINALVAVEGTRL-ESN-RSPSVFDMGRMIATARVVMPRTMVRLSAGRLSFSAGEQALLFFAGANSIFNGDVLLTTPNPAFTADAALFDTLGLVGKKAHVPAKETPYPVE 180
P + R+Y DRL+T++ VR AG+ VC GGILG+GE DR+GLLHTLAT+ +HPESVP+NALV+V+GT L ++N ++ + FDM R IATAR++MP+TMVRLSAGR+SFS EQ LF AGANSIFNGD LLTT NPAF D LF LGLVGKK+H K+TPY V+
Sbjct: 188 PNVITTRTYDDRLNTIANVRKAGISVCCGGILGIGEKDDDRVGLLHTLATMEEHPESVPVNALVSVQGTPLADANLKAVTAFDMARAIATARILMPKTMVRLSAGRMSFSDAEQGFLFMAGANSIFNGDTLLTTSNPAFEKDNQLFTDLGLVGKKSHTANKKTPYVVK 355
BLAST of EWM20601.1 vs. NCBI_GenBank
Match: gi|669140382|ref|XP_008605759.1| (biotin synthetase [Saprolegnia diclina VS20] >gi|530742673|gb|EQC40915.1| biotin synthetase [Saprolegnia diclina VS20]) HSP 1 Score: 223.402 bits (568), Expect = 9.976e-69 Identity = 106/168 (63.10%), Postives = 131/168 (77.98%), Query Frame = 0
Query: 15 PPSLPPRSYQDRLDTLSAVRDAGLHVCSGGILGLGEAAADRIGLLHTLATLPQHPESVPINALVAVEGTRL-ESN-RSPSVFDMGRMIATARVVMPRTMVRLSAGRLSFSAGEQALLFFAGANSIFNGDVLLTTPNPAFTADAALFDTLGLVGKKAHVPAKETPYPVE 180
P + R+Y DRL+T++ VR AG+ VC GGILG+GE DR+GLLHTLAT+ +HPESVP+NALV+V+GT L ++N ++ + FDM R IATAR++MP+TMVRLSAGR+SFS EQ LF AGANSIFNGD LLTT NPAF D LF LGLVGKK+H K+TPY V+
Sbjct: 188 PNVITTRTYDDRLNTIANVRKAGISVCCGGILGIGEKDDDRVGLLHTLATMEEHPESVPVNALVSVQGTPLADANLKAVTAFDMARAIATARILMPKTMVRLSAGRMSFSDAEQGFLFMAGANSIFNGDTLLTTANPAFEKDNQLFTDLGLVGKKSHTANKKTPYIVK 355
BLAST of EWM20601.1 vs. NCBI_GenBank
Match: gi|1173936918|gb|OQR87792.1| (biotin synthase [Achlya hypogyna]) HSP 1 Score: 223.016 bits (567), Expect = 1.304e-68 Identity = 106/168 (63.10%), Postives = 131/168 (77.98%), Query Frame = 0
Query: 15 PPSLPPRSYQDRLDTLSAVRDAGLHVCSGGILGLGEAAADRIGLLHTLATLPQHPESVPINALVAVEGTRL-ESN-RSPSVFDMGRMIATARVVMPRTMVRLSAGRLSFSAGEQALLFFAGANSIFNGDVLLTTPNPAFTADAALFDTLGLVGKKAHVPAKETPYPVE 180
P + R+Y DRL+T++ VR AG+ VC GGILG+GE DR+GLLHTLAT+ +HPESVP+NALV+V+GT L ++N ++ + FDM R IATAR++MP+TMVRLSAGR+SFS EQ LF AGANSIFNGD LLTT NPAF D LF LGLVGKK+H K+TPY V+
Sbjct: 191 PNVITTRTYDDRLNTIANVRKAGISVCCGGILGIGEKDDDRVGLLHTLATMEEHPESVPVNALVSVQGTPLADANLKAVTAFDMARAIATARILMPKTMVRLSAGRMSFSDAEQGFLFMAGANSIFNGDTLLTTANPAFEKDNQLFTDLGLVGKKSHTANKKTPYIVK 358
BLAST of EWM20601.1 vs. NCBI_GenBank
Match: gi|698793194|ref|XP_009829629.1| (biotin synthase [Aphanomyces astaci] >gi|574115196|gb|ETV80682.1| biotin synthase [Aphanomyces astaci]) HSP 1 Score: 223.016 bits (567), Expect = 1.368e-68 Identity = 109/168 (64.88%), Postives = 129/168 (76.79%), Query Frame = 0
Query: 15 PPSLPPRSYQDRLDTLSAVRDAGLHVCSGGILGLGEAAADRIGLLHTLATLPQHPESVPINALVAVEGTRLESNRSPSV--FDMGRMIATARVVMPRTMVRLSAGRLSFSAGEQALLFFAGANSIFNGDVLLTTPNPAFTADAALFDTLGLVGKKAHVPAKETPYPVE 180
P + R+Y DRL+T++ VR AG+ VC GGILG+GE DR+ LLHTLAT+ +HPESVP+NALV+V GT L S P V FDM R IATAR++MP+TMVRLSAGR+SFS EQ LLF AGANSIFNGD LLTT NPAF D ALF LGLVGK +HV +K+TPY V+
Sbjct: 193 PNVISTRTYDDRLNTIANVRKAGISVCCGGILGIGEKEHDRVALLHTLATMEEHPESVPVNALVSVVGTPLASEDLPPVTAFDMARTIATARILMPKTMVRLSAGRMSFSDAEQGLLFMAGANSIFNGDTLLTTANPAFEKDNALFTDLGLVGKPSHVASKKTPYVVK 360
BLAST of EWM20601.1 vs. NCBI_GenBank
Match: gi|1210519776|dbj|GAX21365.1| (biotin synthase [Fistulifera solaris]) HSP 1 Score: 223.016 bits (567), Expect = 7.763e-68 Identity = 112/168 (66.67%), Postives = 125/168 (74.40%), Query Frame = 0
Query: 11 PPSLPPSLPPRSYQDRLDTLSAVRDAGLHVCSGGILGLGEAAADRIGLLHTLATLPQHPESVPINALVAVEGTRL---------ESNRSPSVFDMGRMIATARVVMPRTMVRLSAGRLSFSAGEQALLFFAGANSIFNGDVLLTTPNPAFTADAALFDTLGLVGKKAH 169
P P + RSY+DRL T++ VRDAG+ VC GGILGLGE DR+GLLH LATLP+HPESVPINALVAV+GT L ++ +S VFDM RMIATAR+VMPRTMVRLSAGRLSFS EQ L+F AGANSIFNGD LLTT NP F AD ALF LG GK AH
Sbjct: 239 PEHYPNVITTRSYEDRLQTIANVRDAGISVCCGGILGLGEKETDRVGLLHVLATLPEHPESVPINALVAVQGTPLGDQQQEEDDDAMKSVDVFDMARMIATARIVMPRTMVRLSAGRLSFSDAEQFLMFQAGANSIFNGDKLLTTSNPEFDADQALFRKLGFQGKPAH 406
BLAST of EWM20601.1 vs. NCBI_GenBank
Match: gi|224002813|ref|XP_002291078.1| (biotin synthase, BioB, partial [Thalassiosira pseudonana CCMP1335] >gi|220972854|gb|EED91185.1| biotin synthase, BioB, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 217.238 bits (552), Expect = 6.174e-67 Identity = 109/166 (65.66%), Postives = 125/166 (75.30%), Query Frame = 0
Query: 11 PPSLPPSLPPRSYQDRLDTLSAVRDAGLHVCSGGILGLGEAAADRIGLLHTLATLPQHPESVPINALVAVEGTRL------ESNRSPSV-----FDMGRMIATARVVMPRTMVRLSAGRLSFSAGEQALLFFAGANSIFNGDVLLTTPNPAFTADAALFDTLGLVG 165
P P + R+Y+DRL+T++ VR+AG+ VC GGILGLGE ADR+GLLH LATLP+HPESVPINALVAVEGT L E +++ + FDM RMIATAR+VMPRTMVRLSAGRLSFS EQ L+F AGANSIFNGD LLTT NP F D ALFD LG VG
Sbjct: 165 PEHYPNVITTRTYEDRLETIANVREAGISVCCGGILGLGEKEADRVGLLHVLATLPEHPESVPINALVAVEGTPLGNAAADEDSKADGIADVDAFDMARMIATARIVMPRTMVRLSAGRLSFSDAEQFLMFQAGANSIFNGDKLLTTDNPEFDQDMALFDKLGFVG 330
BLAST of EWM20601.1 vs. NCBI_GenBank
Match: gi|397631374|gb|EJK70128.1| (hypothetical protein THAOC_08542 [Thalassiosira oceanica]) HSP 1 Score: 219.164 bits (557), Expect = 2.543e-66 Identity = 112/170 (65.88%), Postives = 128/170 (75.29%), Query Frame = 0
Query: 11 PPSLPPSLPPRSYQDRLDTLSAVRDAGLHVCSGGILGLGEAAADRIGLLHTLATLPQHPESVPINALVAVEGTRL---------ESNRSPSV--FDMGRMIATARVVMPRTMVRLSAGRLSFSAGEQALLFFAGANSIFNGDVLLTTPNPAFTADAALFDTLGLVGKKAH 169
P P + R+Y+DRL+T++ VR+AG+ VC GGILGLGE DR+GLLH LATLP+HPESVPINALVAVEGT L +S+ +V FDM RMIATAR+VMPRTMVRLSAGRLSFS EQ L+F AGANSIFNGD LLTT NPAF +D ALF LG VGK AH
Sbjct: 250 PEHYPNVITTRTYEDRLETIANVREAGISVCCGGILGLGEKETDRVGLLHVLATLPEHPESVPINALVAVEGTPLGDADADEGVDSDGIANVDSFDMARMIATARIVMPRTMVRLSAGRLSFSDAEQYLMFQAGANSIFNGDKLLTTDNPAFDSDTALFQKLGFVGKPAH 419 The following BLAST results are available for this feature:
BLAST of EWM20601.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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