EWM20604.1, cds10069 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|585100360|gb|EWM20604.1| (cgmp-dependent protein [Nannochloropsis gaditana]) HSP 1 Score: 561.222 bits (1445), Expect = 0.000e+0 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0 Query: 1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRREGGREGGRARVGWRRRWR 277 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRREGGREGGRARVGWRRRWR Sbjct: 1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRREGGREGGRARVGWRRRWR 277
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|299472378|emb|CBN77566.1| (putative PKG-Ib [Ectocarpus siliculosus]) HSP 1 Score: 237.269 bits (604), Expect = 9.036e-68 Identity = 119/246 (48.37%), Postives = 160/246 (65.04%), Query Frame = 0 Query: 1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLR 246 M+V NVGDSRAI+ Q + L PLS DQTPYR+DERERVK GARV+SMDQ+ G EP+HE WGDV LG +DE GDPPR+WS +GEYPGTAFTRS+GD IAEELGV A PEI R+I P D+++++ASDGV+EFLTN+ + + DPL A + + ++++DLWL YE+R+DDIT+IC++++ + E E G +E + +L+ +RP+R Sbjct: 230 MWVANVGDSRAIVVQE---------------------------HEGNLVARPLSSDQTPYRKDERERVKAAGARVMSMDQIEGLEPIHENWGDVDLGVELDEGGDPPRIWSPFGEYPGTAFTRSMGDVIAEELGVTADPEIIRRRIHPDDKFLVIASDGVFEFLTNQSVADMVSMYPDPLDACKKVVQESYDLWLQYEVRTDDITIICVYIEGM-----EAEKTGSPKAKEADLDNIALQGLRPVR 443
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|219119923|ref|XP_002180712.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408185|gb|EEC48120.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 219.935 bits (559), Expect = 7.872e-67 Identity = 108/214 (50.47%), Postives = 147/214 (68.69%), Query Frame = 0 Query: 1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHE-----KWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICL 209 M + NVGDSRA+L Q P A P A T RN L+ PLS DQTPYR+DER R++ GARVLS+DQ+ G EP+ + + D LGE +DE GDPPRVWS G++PGTAFTRS+GD++AE+LGVYA PE+ R+++P D+ +++ASDGV+EFLTN+ I + +DPL A +A+ +A++LWL YE+R+DDIT+IC+ Sbjct: 129 MTIANVGDSRAVLGQAVTGNLPESAAP-----------ATTSRNN--LKAVPLSRDQTPYRKDERSRIRATGARVLSLDQLEGLEPIQDISENGEDDDFVLGEELDEGGDPPRVWSPDGDFPGTAFTRSIGDAMAEDLGVYAEPELLTREMTPDDKIIVLASDGVFEFLTNQSVIDICAKFNDPLEACRAVVAEAYELWLQYELRTDDITIICM 329
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|1173940827|gb|OQR90140.1| (cGMP-dependent protein kinase [Achlya hypogyna]) HSP 1 Score: 223.016 bits (567), Expect = 5.494e-66 Identity = 104/216 (48.15%), Postives = 151/216 (69.91%), Query Frame = 0 Query: 1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGA 216 + V NVGDSRAI+AQ A +G V +L PLS DQTP+R+DER+RVK+ GAR++++DQ+ G+EPLHE WG + LG+ IDE+GDPPR+W +G+YPGTAFTRS+GD ++EELGV+A PEI + + D++++VASDGV+EFLT++ + + + DPL A +A+ +A++ WL +E+R+DDIT IC+F+D G+ Sbjct: 183 IHVSNVGDSRAIIAQE----------------VAKDGEPV------QLVAKPLSIDQTPFRKDERDRVKKTGARIMTVDQLEGYEPLHENWG-LTLGDEIDESGDPPRIWHPHGDYPGTAFTRSIGDQVSEELGVFAEPEIITKALGAHDKFLVVASDGVFEFLTSQAVVNIVKLYKDPLEACRAVVEEAYNRWLQFEVRTDDITCICIFLDDAGS 375
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|1173962174|gb|OQS07976.1| (cGMP-dependent protein kinase, partial [Thraustotheca clavata]) HSP 1 Score: 225.713 bits (574), Expect = 6.173e-65 Identity = 106/213 (49.77%), Postives = 145/213 (68.08%), Query Frame = 0 Query: 1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDH 213 + V NVGDSRA++A+ DA+ ++A PLS DQTPYR DERERVKR GARVL+MDQ+ G P+HE W + E +DE GDPPRVWS G +PGTAFTRS+GD IAE LGV+A PEIT +++ D+Y+++ASDGV+EFLTN+ + + ++SDPL A + + +++ LWL YE+R+DDIT+IC+++DH Sbjct: 169 IHVANVGDSRAVIAR-----------SDASRISAS----------------PLSVDQTPYRTDERERVKRYGARVLTMDQLEGIAPIHENWA-TAINEEVDEDGDPPRVWSPTGNFPGTAFTRSIGDEIAESLGVFATPEITSLQLASSDKYIIIASDGVFEFLTNQAVVDIIKQYSDPLEACEKVVTESYRLWLHYELRTDDITIICIYLDH 353
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|635367743|emb|CCI44012.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 228.024 bits (580), Expect = 6.944e-65 Identity = 117/260 (45.00%), Postives = 167/260 (64.23%), Query Frame = 0 Query: 1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRRE 260 + V NVGDSRAI+A+ D+ +TA PLS DQTP+R+DERERVK+CGAR+L++DQ+ G EP+HE WG ++LGE IDE GDPPR+W YG+YPGTAFTRS+GDS++E+LGV A PEI + ++ D+++++ASDGV+EFLT++ + + DP A QAL +A++ WL YE+R+DDIT IC+++D V + G+ G E S++++ LR RG +G RR+ Sbjct: 46 IHVANVGDSRAIIAKDD--------SNDSFNLTAK----------------PLSIDQTPFRKDERERVKKCGARILTVDQVEGLEPIHENWG-LKLGEEIDENGDPPRIWHPYGQYPGTAFTRSIGDSVSEDLGVTAEPEILSKTLNVHDRFIIIASDGVFEFLTSQNVVDLVKHFDDPSDACQALVEEAYNRWLQYEVRTDDITAICIYLDGVTDDRDAQRGSIYAGAE-----VLSMQSM--LRPVRGAQGPDHRRRD 273
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|635367746|emb|CCI44015.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 228.024 bits (580), Expect = 7.381e-65 Identity = 117/260 (45.00%), Postives = 167/260 (64.23%), Query Frame = 0 Query: 1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRRE 260 + V NVGDSRAI+A+ D+ +TA PLS DQTP+R+DERERVK+CGAR+L++DQ+ G EP+HE WG ++LGE IDE GDPPR+W YG+YPGTAFTRS+GDS++E+LGV A PEI + ++ D+++++ASDGV+EFLT++ + + DP A QAL +A++ WL YE+R+DDIT IC+++D V + G+ G E S++++ LR RG +G RR+ Sbjct: 46 IHVANVGDSRAIIAKDD--------SNDSFNLTAK----------------PLSIDQTPFRKDERERVKKCGARILTVDQVEGLEPIHENWG-LKLGEEIDENGDPPRIWHPYGQYPGTAFTRSIGDSVSEDLGVTAEPEILSKTLNVHDRFIIIASDGVFEFLTSQNVVDLVKHFDDPSDACQALVEEAYNRWLQYEVRTDDITAICIYLDGVTDDRDAQRGSIYAGAE-----VLSMQSM--LRPVRGAQGPDHRRRD 273
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|635367750|emb|CCI44019.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 228.024 bits (580), Expect = 7.471e-65 Identity = 117/260 (45.00%), Postives = 167/260 (64.23%), Query Frame = 0 Query: 1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRRE 260 + V NVGDSRAI+A+ D+ +TA PLS DQTP+R+DERERVK+CGAR+L++DQ+ G EP+HE WG ++LGE IDE GDPPR+W YG+YPGTAFTRS+GDS++E+LGV A PEI + ++ D+++++ASDGV+EFLT++ + + DP A QAL +A++ WL YE+R+DDIT IC+++D V + G+ G E S++++ LR RG +G RR+ Sbjct: 50 IHVANVGDSRAIIAKDD--------SNDSFNLTAK----------------PLSIDQTPFRKDERERVKKCGARILTVDQVEGLEPIHENWG-LKLGEEIDENGDPPRIWHPYGQYPGTAFTRSIGDSVSEDLGVTAEPEILSKTLNVHDRFIIIASDGVFEFLTSQNVVDLVKHFDDPSDACQALVEEAYNRWLQYEVRTDDITAICIYLDGVTDDRDAQRGSIYAGAE-----VLSMQSM--LRPVRGAQGPDHRRRD 277
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|635367748|emb|CCI44017.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 228.024 bits (580), Expect = 7.936e-65 Identity = 117/260 (45.00%), Postives = 167/260 (64.23%), Query Frame = 0 Query: 1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRRE 260 + V NVGDSRAI+A+ D+ +TA PLS DQTP+R+DERERVK+CGAR+L++DQ+ G EP+HE WG ++LGE IDE GDPPR+W YG+YPGTAFTRS+GDS++E+LGV A PEI + ++ D+++++ASDGV+EFLT++ + + DP A QAL +A++ WL YE+R+DDIT IC+++D V + G+ G E S++++ LR RG +G RR+ Sbjct: 50 IHVANVGDSRAIIAKDD--------SNDSFNLTAK----------------PLSIDQTPFRKDERERVKKCGARILTVDQVEGLEPIHENWG-LKLGEEIDENGDPPRIWHPYGQYPGTAFTRSIGDSVSEDLGVTAEPEILSKTLNVHDRFIIIASDGVFEFLTSQNVVDLVKHFDDPSDACQALVEEAYNRWLQYEVRTDDITAICIYLDGVTDDRDAQRGSIYAGAE-----VLSMQSM--LRPVRGAQGPDHRRRD 277
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|1210518502|dbj|GAX22623.1| (protein kinase A [Fistulifera solaris]) HSP 1 Score: 225.328 bits (573), Expect = 9.781e-65 Identity = 120/279 (43.01%), Postives = 173/279 (62.01%), Query Frame = 0 Query: 1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHE--KWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGA----GKKEGEGAGEEGEEEE--EDPAWSLKTVRPLRSPRGREGGREGRREGGREGGRARVG 271 + + NVGDSRA+L Q + PA L+ PLS DQTPYR+DER R++ GAR+LS+DQ+ G EP+ + + D LGE +DE GDPPRVW G+YPGTAFTRSLGD++AEELGV+A PE+ R+I+P D+ +++ASDGV+EFLTN+ + + DPL A +A+ +A++LWL YE R+DDIT+IC+F+D V A ++ E GE E+ E+ + + +RP+R +E +E ++ RE G++ G Sbjct: 236 ITISNVGDSRAVLGQESKGKNGRPA----------------------LKALPLSRDQTPYRKDERARIRATGARILSLDQLEGLEPIVDASENEDFELGEELDEGGDPPRVWHPTGDYPGTAFTRSLGDAMAEELGVFAEPEMLTREITPEDKIIVLASDGVFEFLTNQSVVDICAKFQDPLEACRAVVAEAYELWLQYESRTDDITMICIFIDGVSADLRSSARDEPSESEVGELEDTVENMVMTTEGLRPVRKNVSKEKSKEIQKL--REMGKSMRG 490 The following BLAST results are available for this feature:
BLAST of EWM20604.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|