EWM20604.1, cds10069 (CDS) Nannochloropsis gaditana

Overview
NameEWM20604.1
Unique Namecds10069
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037262.1:45590..45929 -
Alignment locationKK037262.1:45288..45422 -
Alignment locationKK037262.1:44461..44733 -
Alignment locationKK037262.1:44283..44368 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20604.1
Productcgmp-dependent protein
Orig transcript idgnl|cribi|Naga_101738g1.885.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:45590..45929 -
KK037262.1supercontigKK037262.1:45288..45422 -
KK037262.1supercontigKK037262.1:44461..44733 -
KK037262.1supercontigKK037262.1:44283..44368 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016301kinase activity
GO:0005488binding
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006470protein dephosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR015655PP2C
IPR001932PPM-type_phosphatase_dom
Homology
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|585100360|gb|EWM20604.1| (cgmp-dependent protein [Nannochloropsis gaditana])

HSP 1 Score: 561.222 bits (1445), Expect = 0.000e+0
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
Query:    1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRREGGREGGRARVGWRRRWR 277
            MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRREGGREGGRARVGWRRRWR
Sbjct:    1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRREGGREGGRARVGWRRRWR 277          
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|299472378|emb|CBN77566.1| (putative PKG-Ib [Ectocarpus siliculosus])

HSP 1 Score: 237.269 bits (604), Expect = 9.036e-68
Identity = 119/246 (48.37%), Postives = 160/246 (65.04%), Query Frame = 0
Query:    1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLR 246
            M+V NVGDSRAI+ Q                            +   L   PLS DQTPYR+DERERVK  GARV+SMDQ+ G EP+HE WGDV LG  +DE GDPPR+WS +GEYPGTAFTRS+GD IAEELGV A PEI  R+I P D+++++ASDGV+EFLTN+     +  + DPL A + + ++++DLWL YE+R+DDIT+IC++++ +     E E  G    +E +    +L+ +RP+R
Sbjct:  230 MWVANVGDSRAIVVQE---------------------------HEGNLVARPLSSDQTPYRKDERERVKAAGARVMSMDQIEGLEPIHENWGDVDLGVELDEGGDPPRIWSPFGEYPGTAFTRSMGDVIAEELGVTADPEIIRRRIHPDDKFLVIASDGVFEFLTNQSVADMVSMYPDPLDACKKVVQESYDLWLQYEVRTDDITIICVYIEGM-----EAEKTGSPKAKEADLDNIALQGLRPVR 443          
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|219119923|ref|XP_002180712.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408185|gb|EEC48120.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 219.935 bits (559), Expect = 7.872e-67
Identity = 108/214 (50.47%), Postives = 147/214 (68.69%), Query Frame = 0
Query:    1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHE-----KWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICL 209
            M + NVGDSRA+L Q      P  A P           A T RN   L+  PLS DQTPYR+DER R++  GARVLS+DQ+ G EP+ +     +  D  LGE +DE GDPPRVWS  G++PGTAFTRS+GD++AE+LGVYA PE+  R+++P D+ +++ASDGV+EFLTN+  I    + +DPL A +A+  +A++LWL YE+R+DDIT+IC+
Sbjct:  129 MTIANVGDSRAVLGQAVTGNLPESAAP-----------ATTSRNN--LKAVPLSRDQTPYRKDERSRIRATGARVLSLDQLEGLEPIQDISENGEDDDFVLGEELDEGGDPPRVWSPDGDFPGTAFTRSIGDAMAEDLGVYAEPELLTREMTPDDKIIVLASDGVFEFLTNQSVIDICAKFNDPLEACRAVVAEAYELWLQYELRTDDITIICM 329          
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|1173940827|gb|OQR90140.1| (cGMP-dependent protein kinase [Achlya hypogyna])

HSP 1 Score: 223.016 bits (567), Expect = 5.494e-66
Identity = 104/216 (48.15%), Postives = 151/216 (69.91%), Query Frame = 0
Query:    1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGA 216
            + V NVGDSRAI+AQ                  A +G  V      +L   PLS DQTP+R+DER+RVK+ GAR++++DQ+ G+EPLHE WG + LG+ IDE+GDPPR+W  +G+YPGTAFTRS+GD ++EELGV+A PEI  + +   D++++VASDGV+EFLT++  +  +  + DPL A +A+  +A++ WL +E+R+DDIT IC+F+D  G+
Sbjct:  183 IHVSNVGDSRAIIAQE----------------VAKDGEPV------QLVAKPLSIDQTPFRKDERDRVKKTGARIMTVDQLEGYEPLHENWG-LTLGDEIDESGDPPRIWHPHGDYPGTAFTRSIGDQVSEELGVFAEPEIITKALGAHDKFLVVASDGVFEFLTSQAVVNIVKLYKDPLEACRAVVEEAYNRWLQFEVRTDDITCICIFLDDAGS 375          
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|1173962174|gb|OQS07976.1| (cGMP-dependent protein kinase, partial [Thraustotheca clavata])

HSP 1 Score: 225.713 bits (574), Expect = 6.173e-65
Identity = 106/213 (49.77%), Postives = 145/213 (68.08%), Query Frame = 0
Query:    1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDH 213
            + V NVGDSRA++A+            DA+ ++A                 PLS DQTPYR DERERVKR GARVL+MDQ+ G  P+HE W    + E +DE GDPPRVWS  G +PGTAFTRS+GD IAE LGV+A PEIT  +++  D+Y+++ASDGV+EFLTN+  +  + ++SDPL A + +  +++ LWL YE+R+DDIT+IC+++DH
Sbjct:  169 IHVANVGDSRAVIAR-----------SDASRISAS----------------PLSVDQTPYRTDERERVKRYGARVLTMDQLEGIAPIHENWA-TAINEEVDEDGDPPRVWSPTGNFPGTAFTRSIGDEIAESLGVFATPEITSLQLASSDKYIIIASDGVFEFLTNQAVVDIIKQYSDPLEACEKVVTESYRLWLHYELRTDDITIICIYLDH 353          
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|635367743|emb|CCI44012.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 228.024 bits (580), Expect = 6.944e-65
Identity = 117/260 (45.00%), Postives = 167/260 (64.23%), Query Frame = 0
Query:    1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRRE 260
            + V NVGDSRAI+A+            D+  +TA                 PLS DQTP+R+DERERVK+CGAR+L++DQ+ G EP+HE WG ++LGE IDE GDPPR+W  YG+YPGTAFTRS+GDS++E+LGV A PEI  + ++  D+++++ASDGV+EFLT++  +  +    DP  A QAL  +A++ WL YE+R+DDIT IC+++D V   +    G+   G E       S++++  LR  RG +G    RR+
Sbjct:   46 IHVANVGDSRAIIAKDD--------SNDSFNLTAK----------------PLSIDQTPFRKDERERVKKCGARILTVDQVEGLEPIHENWG-LKLGEEIDENGDPPRIWHPYGQYPGTAFTRSIGDSVSEDLGVTAEPEILSKTLNVHDRFIIIASDGVFEFLTSQNVVDLVKHFDDPSDACQALVEEAYNRWLQYEVRTDDITAICIYLDGVTDDRDAQRGSIYAGAE-----VLSMQSM--LRPVRGAQGPDHRRRD 273          
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|635367746|emb|CCI44015.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 228.024 bits (580), Expect = 7.381e-65
Identity = 117/260 (45.00%), Postives = 167/260 (64.23%), Query Frame = 0
Query:    1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRRE 260
            + V NVGDSRAI+A+            D+  +TA                 PLS DQTP+R+DERERVK+CGAR+L++DQ+ G EP+HE WG ++LGE IDE GDPPR+W  YG+YPGTAFTRS+GDS++E+LGV A PEI  + ++  D+++++ASDGV+EFLT++  +  +    DP  A QAL  +A++ WL YE+R+DDIT IC+++D V   +    G+   G E       S++++  LR  RG +G    RR+
Sbjct:   46 IHVANVGDSRAIIAKDD--------SNDSFNLTAK----------------PLSIDQTPFRKDERERVKKCGARILTVDQVEGLEPIHENWG-LKLGEEIDENGDPPRIWHPYGQYPGTAFTRSIGDSVSEDLGVTAEPEILSKTLNVHDRFIIIASDGVFEFLTSQNVVDLVKHFDDPSDACQALVEEAYNRWLQYEVRTDDITAICIYLDGVTDDRDAQRGSIYAGAE-----VLSMQSM--LRPVRGAQGPDHRRRD 273          
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|635367750|emb|CCI44019.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 228.024 bits (580), Expect = 7.471e-65
Identity = 117/260 (45.00%), Postives = 167/260 (64.23%), Query Frame = 0
Query:    1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRRE 260
            + V NVGDSRAI+A+            D+  +TA                 PLS DQTP+R+DERERVK+CGAR+L++DQ+ G EP+HE WG ++LGE IDE GDPPR+W  YG+YPGTAFTRS+GDS++E+LGV A PEI  + ++  D+++++ASDGV+EFLT++  +  +    DP  A QAL  +A++ WL YE+R+DDIT IC+++D V   +    G+   G E       S++++  LR  RG +G    RR+
Sbjct:   50 IHVANVGDSRAIIAKDD--------SNDSFNLTAK----------------PLSIDQTPFRKDERERVKKCGARILTVDQVEGLEPIHENWG-LKLGEEIDENGDPPRIWHPYGQYPGTAFTRSIGDSVSEDLGVTAEPEILSKTLNVHDRFIIIASDGVFEFLTSQNVVDLVKHFDDPSDACQALVEEAYNRWLQYEVRTDDITAICIYLDGVTDDRDAQRGSIYAGAE-----VLSMQSM--LRPVRGAQGPDHRRRD 277          
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|635367748|emb|CCI44017.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 228.024 bits (580), Expect = 7.936e-65
Identity = 117/260 (45.00%), Postives = 167/260 (64.23%), Query Frame = 0
Query:    1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHEKWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGAGKKEGEGAGEEGEEEEEDPAWSLKTVRPLRSPRGREGGREGRRE 260
            + V NVGDSRAI+A+            D+  +TA                 PLS DQTP+R+DERERVK+CGAR+L++DQ+ G EP+HE WG ++LGE IDE GDPPR+W  YG+YPGTAFTRS+GDS++E+LGV A PEI  + ++  D+++++ASDGV+EFLT++  +  +    DP  A QAL  +A++ WL YE+R+DDIT IC+++D V   +    G+   G E       S++++  LR  RG +G    RR+
Sbjct:   50 IHVANVGDSRAIIAKDD--------SNDSFNLTAK----------------PLSIDQTPFRKDERERVKKCGARILTVDQVEGLEPIHENWG-LKLGEEIDENGDPPRIWHPYGQYPGTAFTRSIGDSVSEDLGVTAEPEILSKTLNVHDRFIIIASDGVFEFLTSQNVVDLVKHFDDPSDACQALVEEAYNRWLQYEVRTDDITAICIYLDGVTDDRDAQRGSIYAGAE-----VLSMQSM--LRPVRGAQGPDHRRRD 277          
BLAST of EWM20604.1 vs. NCBI_GenBank
Match: gi|1210518502|dbj|GAX22623.1| (protein kinase A [Fistulifera solaris])

HSP 1 Score: 225.328 bits (573), Expect = 9.781e-65
Identity = 120/279 (43.01%), Postives = 173/279 (62.01%), Query Frame = 0
Query:    1 MFVCNVGDSRAILAQRPRAPEPAPAPPDATAVTAPNGAAVTGRNGAELRVFPLSEDQTPYRRDERERVKRCGARVLSMDQMAGFEPLHE--KWGDVRLGEAIDEAGDPPRVWSKYGEYPGTAFTRSLGDSIAEELGVYAVPEITVRKISPRDQYVMVASDGVYEFLTNKQCIQTLHEHSDPLAATQALARKAFDLWLSYEIRSDDITLICLFMDHVGA----GKKEGEGAGEEGEEEE--EDPAWSLKTVRPLRSPRGREGGREGRREGGREGGRARVG 271
            + + NVGDSRA+L Q  +     PA                      L+  PLS DQTPYR+DER R++  GAR+LS+DQ+ G EP+ +  +  D  LGE +DE GDPPRVW   G+YPGTAFTRSLGD++AEELGV+A PE+  R+I+P D+ +++ASDGV+EFLTN+  +    +  DPL A +A+  +A++LWL YE R+DDIT+IC+F+D V A      ++     E GE E+  E+   + + +RP+R    +E  +E ++   RE G++  G
Sbjct:  236 ITISNVGDSRAVLGQESKGKNGRPA----------------------LKALPLSRDQTPYRKDERARIRATGARILSLDQLEGLEPIVDASENEDFELGEELDEGGDPPRVWHPTGDYPGTAFTRSLGDAMAEELGVFAEPEMLTREITPEDKIIVLASDGVFEFLTNQSVVDICAKFQDPLEACRAVVAEAYELWLQYESRTDDITMICIFIDGVSADLRSSARDEPSESEVGELEDTVENMVMTTEGLRPVRKNVSKEKSKEIQKL--REMGKSMRG 490          
The following BLAST results are available for this feature:
BLAST of EWM20604.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100360|gb|EWM20604.1|0.000e+0100.00cgmp-dependent protein [Nannochloropsis gaditana][more]
gi|299472378|emb|CBN77566.1|9.036e-6848.37putative PKG-Ib [Ectocarpus siliculosus][more]
gi|219119923|ref|XP_002180712.1|7.872e-6750.47predicted protein, partial [Phaeodactylum tricornu... [more]
gi|1173940827|gb|OQR90140.1|5.494e-6648.15cGMP-dependent protein kinase [Achlya hypogyna][more]
gi|1173962174|gb|OQS07976.1|6.173e-6549.77cGMP-dependent protein kinase, partial [Thraustoth... [more]
gi|635367743|emb|CCI44012.1|6.944e-6545.00unnamed protein product [Albugo candida][more]
gi|635367746|emb|CCI44015.1|7.381e-6545.00unnamed protein product [Albugo candida][more]
gi|635367750|emb|CCI44019.1|7.471e-6545.00unnamed protein product [Albugo candida][more]
gi|635367748|emb|CCI44017.1|7.936e-6545.00unnamed protein product [Albugo candida][more]
gi|1210518502|dbj|GAX22623.1|9.781e-6543.01protein kinase A [Fistulifera solaris][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10100rna10100Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications