EWM20631.1, cds10041 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20631.1 vs. NCBI_GenBank
Match: gi|585100417|gb|EWM20631.1| (adp-ribosylation factor gtpase-activating protein agd12, partial [Nannochloropsis gaditana]) HSP 1 Score: 432.95 bits (1112), Expect = 1.569e-153 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 Query: 1 MAAQARELLRLLRLPSNRSCADCDAPLNDSTNVWASITHGVFVCVTCVSVHRRVGTHISRVRSVNLDVWTEEETACMRELSGNGGNVYVNSIYERYLPRGCVKPSPDAAFEEREMWIRAKYEHKVRLLPFHHFFPPSCVPIVAFYPRSSIAACPSSLPAPFPPSLPPSLPLCFIPETSSSSPSDAHTDNATLPPSLPLPLPSFSASPSHSQAFT 214 MAAQARELLRLLRLPSNRSCADCDAPLNDSTNVWASITHGVFVCVTCVSVHRRVGTHISRVRSVNLDVWTEEETACMRELSGNGGNVYVNSIYERYLPRGCVKPSPDAAFEEREMWIRAKYEHKVRLLPFHHFFPPSCVPIVAFYPRSSIAACPSSLPAPFPPSLPPSLPLCFIPETSSSSPSDAHTDNATLPPSLPLPLPSFSASPSHSQAFT Sbjct: 1 MAAQARELLRLLRLPSNRSCADCDAPLNDSTNVWASITHGVFVCVTCVSVHRRVGTHISRVRSVNLDVWTEEETACMRELSGNGGNVYVNSIYERYLPRGCVKPSPDAAFEEREMWIRAKYEHKVRLLPFHHFFPPSCVPIVAFYPRSSIAACPSSLPAPFPPSLPPSLPLCFIPETSSSSPSDAHTDNATLPPSLPLPLPSFSASPSHSQAFT 214
BLAST of EWM20631.1 vs. NCBI_GenBank
Match: gi|743858957|ref|XP_010942504.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12 [Elaeis guineensis] >gi|743858959|ref|XP_010942505.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12 [Elaeis guineensis] >gi|1130621167|ref|XP_019701370.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12 [Elaeis guineensis]) HSP 1 Score: 130.183 bits (326), Expect = 5.903e-33 Identity = 67/135 (49.63%), Postives = 83/135 (61.48%), Query Frame = 0 Query: 3 AQARELLRLLRLPSNRSCADCDAPLNDSTNVWASITHGVFVCVTCVSVHRRVGTHISRVRSVNLDVWTEEETACMRELSGNGGNVYVNSIYERYLPRGCVKPSPDAAFEEREMWIRAKYEHKVRLLPFHHFFPPS 137 A R+L LL + NR CADC AP WAS GVF+C+ C VHR +GTHIS+V SV+LD WTE+E M E+ GGN Y N+IYE +LP+G KP+PDA+ EER +IR+KYE F PS Sbjct: 10 ASVRKLKELLHIRDNRFCADCGAP----DPKWASANIGVFICLKCCGVHRSLGTHISKVLSVSLDEWTEDEIESMLEV---GGNSYANAIYEAFLPQGYSKPNPDASHEERTKFIRSKYE-------LQEFLKPS 130
BLAST of EWM20631.1 vs. NCBI_GenBank
Match: gi|672141770|ref|XP_008794724.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like isoform X2 [Phoenix dactylifera] >gi|672141772|ref|XP_008794725.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like isoform X2 [Phoenix dactylifera]) HSP 1 Score: 129.028 bits (323), Expect = 1.631e-32 Identity = 66/135 (48.89%), Postives = 84/135 (62.22%), Query Frame = 0 Query: 3 AQARELLRLLRLPSNRSCADCDAPLNDSTNVWASITHGVFVCVTCVSVHRRVGTHISRVRSVNLDVWTEEETACMRELSGNGGNVYVNSIYERYLPRGCVKPSPDAAFEEREMWIRAKYEHKVRLLPFHHFFPPS 137 A R+L LL + NR CADC AP WAS GVF+C+ C +VHR +GTHIS+V SV+LD WTE+E M E+ GGN Y N+IYE +LP+G KP+PD++ EER +IR+KYE F PS Sbjct: 10 ASVRKLKELLHIRDNRFCADCGAP----DPKWASANIGVFICLKCCAVHRSLGTHISKVLSVSLDEWTEDEIESMLEV---GGNSYANAIYEAFLPQGYSKPNPDSSHEERAKFIRSKYE-------LQEFLKPS 130
BLAST of EWM20631.1 vs. NCBI_GenBank
Match: gi|1117398133|ref|XP_019464168.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like [Lupinus angustifolius] >gi|1117398138|ref|XP_019464169.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like [Lupinus angustifolius] >gi|1117398144|ref|XP_019464170.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like [Lupinus angustifolius]) HSP 1 Score: 128.642 bits (322), Expect = 2.337e-32 Identity = 76/179 (42.46%), Postives = 93/179 (51.96%), Query Frame = 0 Query: 2 AAQARELLRLLRLPSNRSCADCDAPLNDSTNVWASITHGVFVCVTCVSVHRRVGTHISRVRSVNLDVWTEEETACMRELSGNGGNVYVNSIYERYLPRGCVKPSPDAAFEEREMWIRAKYEHKVRLLPFHHFFPPSCVPIVAFYPRSSIAACPSSLPAPFPPSLPPSLPLCFIPETSSS 180 A+ R + LL NR CADC+AP WAS GVFVC+ C VHR +GTHIS++ SV LD W+EEE M E+ GGN NSIYE YLP G KP+ DA+ E+R +IR+KYEH+ F PS ++ SS F S L F TSSS Sbjct: 14 ASGKRRMKDLLLHKDNRFCADCNAP----DPKWASANIGVFVCLKCCGVHRSLGTHISKINSVTLDEWSEEEIDAMIEV---GGNASANSIYEAYLPEGYTKPASDASHEQRAKFIRSKYEHQ-------EFLKPSL---------RIVSGKSSSHKNTFKASFSKRLMDSFRKSTSSS 169
BLAST of EWM20631.1 vs. NCBI_GenBank
Match: gi|255634646|gb|ACU17685.1| (unknown, partial [Glycine max]) HSP 1 Score: 126.716 bits (317), Expect = 2.788e-32 Identity = 66/136 (48.53%), Postives = 80/136 (58.82%), Query Frame = 0 Query: 2 AAQARELLRLLRLPSNRSCADCDAPLNDSTNVWASITHGVFVCVTCVSVHRRVGTHISRVRSVNLDVWTEEETACMRELSGNGGNVYVNSIYERYLPRGCVKPSPDAAFEEREMWIRAKYEHKVRLLPFHHFFPPS 137 A+ R+L LL NR CADC+AP WAS GVF+C+ C VHR +GTHIS+V SV LD W+E+E M E+ GGNV NSIYE Y+P G KP PDA E+R +IR+KYE F PS Sbjct: 7 ASSRRKLKDLLHQSGNRLCADCNAP----DPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDDWSEDEIDAMTEV---GGNVSANSIYEAYIPEGYTKPGPDAGHEQRSKFIRSKYE-------LQEFLKPS 128
BLAST of EWM20631.1 vs. NCBI_GenBank
Match: gi|672141766|ref|XP_008794722.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like isoform X1 [Phoenix dactylifera] >gi|672141768|ref|XP_008794723.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like isoform X1 [Phoenix dactylifera]) HSP 1 Score: 128.642 bits (322), Expect = 3.204e-32 Identity = 66/135 (48.89%), Postives = 84/135 (62.22%), Query Frame = 0 Query: 3 AQARELLRLLRLPSNRSCADCDAPLNDSTNVWASITHGVFVCVTCVSVHRRVGTHISRVRSVNLDVWTEEETACMRELSGNGGNVYVNSIYERYLPRGCVKPSPDAAFEEREMWIRAKYEHKVRLLPFHHFFPPS 137 A R+L LL + NR CADC AP WAS GVF+C+ C +VHR +GTHIS+V SV+LD WTE+E M E+ GGN Y N+IYE +LP+G KP+PD++ EER +IR+KYE F PS Sbjct: 33 ASVRKLKELLHIRDNRFCADCGAP----DPKWASANIGVFICLKCCAVHRSLGTHISKVLSVSLDEWTEDEIESMLEV---GGNSYANAIYEAFLPQGYSKPNPDSSHEERAKFIRSKYE-------LQEFLKPS 153
BLAST of EWM20631.1 vs. NCBI_GenBank
Match: gi|593693922|ref|XP_007147482.1| (hypothetical protein PHAVU_006G128200g [Phaseolus vulgaris] >gi|593693924|ref|XP_007147483.1| hypothetical protein PHAVU_006G128200g [Phaseolus vulgaris] >gi|561020705|gb|ESW19476.1| hypothetical protein PHAVU_006G128200g [Phaseolus vulgaris] >gi|561020706|gb|ESW19477.1| hypothetical protein PHAVU_006G128200g [Phaseolus vulgaris]) HSP 1 Score: 127.872 bits (320), Expect = 3.767e-32 Identity = 66/136 (48.53%), Postives = 80/136 (58.82%), Query Frame = 0 Query: 2 AAQARELLRLLRLPSNRSCADCDAPLNDSTNVWASITHGVFVCVTCVSVHRRVGTHISRVRSVNLDVWTEEETACMRELSGNGGNVYVNSIYERYLPRGCVKPSPDAAFEEREMWIRAKYEHKVRLLPFHHFFPPS 137 A+ R+L LL NR CADC+AP WAS GVF+C+ C VHR +GTHIS+V SV LD W+E+E M E+ GGN NSIYE Y+P G KP PDA E+R +IR+KYE F F PS Sbjct: 7 ASSRRKLKDLLLQKDNRCCADCNAP----DPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWSEDEIDAMMEV---GGNASANSIYEAYIPEGLTKPEPDAGHEQRSKFIRSKYE-------FQEFLKPS 128
BLAST of EWM20631.1 vs. NCBI_GenBank
Match: gi|1175869783|ref|XP_020588600.1| (ADP-ribosylation factor GTPase-activating protein AGD12-like isoform X2 [Phalaenopsis equestris]) HSP 1 Score: 127.102 bits (318), Expect = 9.269e-32 Identity = 64/136 (47.06%), Postives = 83/136 (61.03%), Query Frame = 0 Query: 2 AAQARELLRLLRLPSNRSCADCDAPLNDSTNVWASITHGVFVCVTCVSVHRRVGTHISRVRSVNLDVWTEEETACMRELSGNGGNVYVNSIYERYLPRGCVKPSPDAAFEEREMWIRAKYEHKVRLLPFHHFFPPS 137 + ++L LL NR CADC AP WAS+ GVFVCV C VHR +GTHIS+V SV LD W++EE + E+ GGN Y NSIYE +LP+ +KP+ D+++EER +IR+KYE F F PS Sbjct: 12 SGNKKQLKELLHKSDNRICADCSAP----DPKWASVNIGVFVCVQCCGVHRSLGTHISKVLSVTLDEWSDEEIQSVIEV---GGNSYANSIYEAFLPQNFLKPTTDSSYEERAKFIRSKYE-------FQDFLKPS 133
BLAST of EWM20631.1 vs. NCBI_GenBank
Match: gi|1175869776|ref|XP_020588597.1| (ADP-ribosylation factor GTPase-activating protein AGD12-like isoform X1 [Phalaenopsis equestris] >gi|1175869780|ref|XP_020588599.1| ADP-ribosylation factor GTPase-activating protein AGD12-like isoform X1 [Phalaenopsis equestris]) HSP 1 Score: 126.716 bits (317), Expect = 1.255e-31 Identity = 64/135 (47.41%), Postives = 83/135 (61.48%), Query Frame = 0 Query: 3 AQARELLRLLRLPSNRSCADCDAPLNDSTNVWASITHGVFVCVTCVSVHRRVGTHISRVRSVNLDVWTEEETACMRELSGNGGNVYVNSIYERYLPRGCVKPSPDAAFEEREMWIRAKYEHKVRLLPFHHFFPPS 137 + ++L LL NR CADC AP WAS+ GVFVCV C VHR +GTHIS+V SV LD W++EE + E+ GGN Y NSIYE +LP+ +KP+ D+++EER +IR+KYE F F PS Sbjct: 15 SNKKQLKELLHKSDNRICADCSAP----DPKWASVNIGVFVCVQCCGVHRSLGTHISKVLSVTLDEWSDEEIQSVIEV---GGNSYANSIYEAFLPQNFLKPTTDSSYEERAKFIRSKYE-------FQDFLKPS 135
BLAST of EWM20631.1 vs. NCBI_GenBank
Match: gi|1142824144|gb|AQK82231.1| (Putative calcium-dependent lipid-binding (CaLB domain) family protein [Zea mays]) HSP 1 Score: 122.094 bits (305), Expect = 1.599e-31 Identity = 63/125 (50.40%), Postives = 80/125 (64.00%), Query Frame = 0 Query: 5 ARELLRLLRLPSNRSCADCDAPLNDSTNVWASITHGVFVCVTCVSVHRRVGTHISRVRSVNLDVWTEEETACMRELSGNGGNVYVNSIYERYLPRGCVKPSPDAAFEEREMWIRAKYEHKVRLLP 129 AR+L LL+ NR CADC AP WAS GVF+C+ C VHR +GTH+S+V SV LD WT++E M E+ GGN Y N+IYE +LP G KP PD++ EER +IR+KYE + L P Sbjct: 2 ARKLRELLQKSGNRVCADCGAP----DPKWASANIGVFICLKCSGVHRSLGTHVSKVLSVTLDQWTDDEINSMIEV---GGNSYANAIYEAFLPEGYQKPHPDSSQEERADFIRSKYELQEFLKP 119 The following BLAST results are available for this feature:
BLAST of EWM20631.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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