EWM29671.1, cds1002 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29671.1 vs. NCBI_GenBank
Match: gi|585112245|gb|EWM29671.1| (hypothetical protein Naga_100112g18 [Nannochloropsis gaditana]) HSP 1 Score: 204.912 bits (520), Expect = 5.034e-67 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 Query: 1 MGTDLIAGHSAHCFQGASAELRCLYDLGDFVDDYATDQYARNDLGLFFFVLFDLDAKEPWRVEAVPLKLDFCLTRLATGNTHGFENQRNVCFGFNLTLS 99 MGTDLIAGHSAHCFQGASAELRCLYDLGDFVDDYATDQYARNDLGLFFFVLFDLDAKEPWRVEAVPLKLDFCLTRLATGNTHGFENQRNVCFGFNLTLS Sbjct: 1 MGTDLIAGHSAHCFQGASAELRCLYDLGDFVDDYATDQYARNDLGLFFFVLFDLDAKEPWRVEAVPLKLDFCLTRLATGNTHGFENQRNVCFGFNLTLS 99
BLAST of EWM29671.1 vs. NCBI_GenBank
Match: gi|953809125|ref|WP_058043162.1| (poly-gamma-glutamate biosynthesis protein [Streptomyces sp. MBT76]) HSP 1 Score: 95.9005 bits (237), Expect = 9.528e-22 Identity = 54/100 (54.00%), Postives = 61/100 (61.00%), Query Frame = 0 Query: 2 GTDLIAGHSAHCFQGASAELRCLYDLGDFVDDYATDQYARNDLGLFFFVLFDLDAKEPWRVEAVPLKLDFCLTRLATGNTHGFENQ--RNVCFGFNLTLS 99 G L+AGHSAH F G + R LYDLGDF+DDYATD RNDLGL F V F D P RVEAVPL LDFC TRLA G+ + R C F ++ Sbjct: 211 GATLVAGHSAHVFHGV--QDRVLYDLGDFIDDYATDDRLRNDLGLLFLVSF--DGARPVRVEAVPLALDFCRTRLADEAETGWITRRFRRACAAFGTDVA 306
BLAST of EWM29671.1 vs. NCBI_GenBank
Match: gi|663371202|ref|WP_030368578.1| (poly-gamma-glutamate biosynthesis protein [Streptomyces roseoverticillatus]) HSP 1 Score: 93.2041 bits (230), Expect = 1.072e-20 Identity = 50/75 (66.67%), Postives = 52/75 (69.33%), Query Frame = 0 Query: 2 GTDLIAGHSAHCFQGASAELRCLYDLGDFVDDYATDQYARNDLGLFFFVLFDLDAKEPWRVEAVPLKLDFCLTRL 76 G L+AGHSAH F G + R LYDLGDFVDDYATD RNDLGL F V F D P RVEAVPL LDFC TRL Sbjct: 211 GATLVAGHSAHVFHGVAD--RVLYDLGDFVDDYATDDDLRNDLGLLFLVTF--DGTRPARVEAVPLALDFCRTRL 281
BLAST of EWM29671.1 vs. NCBI_GenBank
Match: gi|1052408393|emb|SCF65289.1| (poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) [Streptomyces sp. Ncost-T10-10d]) HSP 1 Score: 92.8189 bits (229), Expect = 1.864e-20 Identity = 54/103 (52.43%), Postives = 62/103 (60.19%), Query Frame = 0 Query: 2 GTDLIAGHSAHCFQGASAELRCLYDLGDFVDDYATDQYARNDLGLFFFVLFD-LDAKE--PWRVEAVPLKLDFCLTRLATGNTHGFENQR--NVCFGFNLTLS 99 G L+AGHSAH F G + R LYDLGDFVDDYA D RNDLGL F V D DA P RV A+PL LD+C TRLA G + +R C F+ T+S Sbjct: 216 GATLVAGHSAHVFHGIAD--RILYDLGDFVDDYAVDPVLRNDLGLLFLVTLDGPDAAHLVPVRVAAIPLALDYCHTRLARGEDREWIRERLITACAEFDTTVS 316
BLAST of EWM29671.1 vs. NCBI_GenBank
Match: gi|739843647|ref|WP_037694546.1| (poly-gamma-glutamate biosynthesis protein [Streptomyces atratus]) HSP 1 Score: 92.4337 bits (228), Expect = 2.627e-20 Identity = 54/103 (52.43%), Postives = 61/103 (59.22%), Query Frame = 0 Query: 2 GTDLIAGHSAHCFQGASAELRCLYDLGDFVDDYATDQYARNDLGLFFFVLFD-LDAKE--PWRVEAVPLKLDFCLTRLATGNTHGFENQR--NVCFGFNLTLS 99 G L+AGHSAH F G + R LYDLGDFVDDYA D RNDLGL F V D DA P +VEAVPL LDFC TRLA G + +R C F ++ Sbjct: 216 GATLVAGHSAHVFHGIA--YRILYDLGDFVDDYAVDPVLRNDLGLLFLVTLDGPDAAHLVPAQVEAVPLALDFCHTRLAHGEDREWIRERFTTACAAFGTAVA 316
BLAST of EWM29671.1 vs. NCBI_GenBank
Match: gi|664400058|ref|WP_030926104.1| (poly-gamma-glutamate biosynthesis protein [Streptomyces sp. NRRL B-24720]) HSP 1 Score: 91.6633 bits (226), Expect = 4.463e-20 Identity = 51/90 (56.67%), Postives = 57/90 (63.33%), Query Frame = 0 Query: 2 GTDLIAGHSAHCFQGASAELRCLYDLGDFVDDYATDQYARNDLGLFFFVLFD-LDAKE--PWRVEAVPLKLDFCLTRLATGNTHGFENQR 88 G L+AGHSAH F G + R LYD+GDFVDDYA D RNDLGL F V D DA P RVEAVPL LD+C TRLA G + +R Sbjct: 216 GATLVAGHSAHVFHGIAD--RILYDMGDFVDDYAVDPVLRNDLGLLFLVTLDGPDAAHLVPARVEAVPLALDYCHTRLARGEDREWVRER 303
BLAST of EWM29671.1 vs. NCBI_GenBank
Match: gi|654593749|ref|WP_028060724.1| (poly-gamma-glutamate biosynthesis protein [Solirubrobacter sp. URHD0082]) HSP 1 Score: 91.2781 bits (225), Expect = 5.588e-20 Identity = 50/87 (57.47%), Postives = 58/87 (66.67%), Query Frame = 0 Query: 2 GTDLIAGHSAHCFQGASAELRCLYDLGDFVDDYATDQYARNDLGLFFFVLFDLDAKEPWRVEAVPLKLDFCLTRLATGNTHGFENQR 88 G L+AGHSAH GA E LYDLGDFVDDYA D RNDLGL F V DL A P R+EAVPLK++ CLTR+A G+ + +R Sbjct: 213 GATLVAGHSAHVPHGA--ERAVLYDLGDFVDDYAVDPRLRNDLGLLFLV--DLGAGGPQRLEAVPLKIERCLTRIARGDDAEWIRRR 295
BLAST of EWM29671.1 vs. NCBI_GenBank
Match: gi|517382890|ref|WP_018556918.1| (hypothetical protein [Streptomyces sp. BoleA5]) HSP 1 Score: 90.8929 bits (224), Expect = 1.064e-19 Identity = 46/76 (60.53%), Postives = 52/76 (68.42%), Query Frame = 0 Query: 2 GTDLIAGHSAHCFQGASAELRCLYDLGDFVDDYATDQYARNDLGLFFFVLFDLDAKEPWRVEAVPLKLDFCLTRLA 77 G L+AG SAH F G + + LYDLGDFVDDYATD RND GL F V FD + P R+EAVP+ LDFC TRLA Sbjct: 218 GATLVAGTSAHAFHGVADGV--LYDLGDFVDDYATDPRLRNDRGLLFLVTFDPAGRRPVRLEAVPIALDFCFTRLA 291
BLAST of EWM29671.1 vs. NCBI_GenBank
Match: gi|1099943059|emb|SFS70998.1| (poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) [Streptomyces sp. ok210]) HSP 1 Score: 90.5077 bits (223), Expect = 1.355e-19 Identity = 49/90 (54.44%), Postives = 55/90 (61.11%), Query Frame = 0 Query: 2 GTDLIAGHSAHCFQGASAELRCLYDLGDFVDDYATDQYARNDLGLFFFVLFDLDAKE---PWRVEAVPLKLDFCLTRLATGNTHGFENQR 88 G L+AGHSAH F G + R LYD+GDFVDDYA D RNDLGL F V D P RVEAVPL LD+C TRLA G + +R Sbjct: 216 GATLVAGHSAHVFHGIAD--RILYDMGDFVDDYAVDPVLRNDLGLLFLVTLDGPDPAHLVPARVEAVPLTLDYCHTRLARGEDREWVRER 303
BLAST of EWM29671.1 vs. NCBI_GenBank
Match: gi|1183729843|ref|WP_084955287.1| (poly-gamma-glutamate biosynthesis protein [Thermoactinospora rubra]) HSP 1 Score: 90.1225 bits (222), Expect = 1.392e-19 Identity = 50/100 (50.00%), Postives = 59/100 (59.00%), Query Frame = 0 Query: 2 GTDLIAGHSAHCFQGASAELRCLYDLGDFVDDYATDQYARNDLGLFFFVLFDLDAKEPWRVEAVPLKLDFCLTRLATGNTHGFENQR--NVCFGFNLTLS 99 G L+AGHSAH F G + LYD+GDFVDDY D RNDLGL F V LD + P R+ AVP+ LDFC TRLATG + +R C F +S Sbjct: 216 GASLVAGHSAHVFHGVEGPV--LYDMGDFVDDYIVDPDLRNDLGLIFLVT--LDEQGPVRLRAVPIALDFCYTRLATGREAEWIRRRFAGACAEFGTQVS 311 The following BLAST results are available for this feature:
BLAST of EWM29671.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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