EWM29662.1, cds1001 (CDS) Nannochloropsis gaditana

Overview
NameEWM29662.1
Unique Namecds1001
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:935824..936322 +
Alignment locationCM002456.1:936472..937973 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29662.1
Producttbc domain-containing protein
Orig transcript idgnl|cribi|Naga_100112g19.5445.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:935824..936322 +
CM002456.1supercontigCM002456.1:936472..937973 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR000195Rab-GTPase-TBC_dom
Homology
BLAST of EWM29662.1 vs. NCBI_GenBank
Match: gi|585112236|gb|EWM29662.1| (tbc domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 1374.76 bits (3557), Expect = 0.000e+0
Identity = 666/666 (100.00%), Postives = 666/666 (100.00%), Query Frame = 0
Query:    1 MHTSRQVNQSADLQYSTVLWEAAFDANKNDDDTEEADLSDEEMREAHGPSLEHSIMVARGGKLCIRVRDDSWILPGTVFVSHFDSVSSQGGKGPIEESGLVGVGDFLVRVNGCDVVGKGARHALALIKDEASADSVSLTFRRLQTSSISREGNRIRSEAGIHLTEQHRVLMFRYLLDSKPIDKRRLASLAGDGIPDVDKHLRPLAWRILLLYLPDEVSLWDAHLKQERAIYYQLVQELTIMTGPAASCPPSASGHVINESEDQNFRGSWRAGDASPRLDTPLCALSSAPSQEGDARNTAGSMKATDPNLTFCQGHPGSAPPLPRSGRGSGELDVSLGSSQDRLPTRPRFDADRSLFNEIRKDVVRTHPDQNFYQDQTFGTARYDALLRILFIYAKTNSGTRYIQGMNELAGTLFYVMSRDSDQEWAEHAEADTMFLFAQLMSQLRDVFIEKMDESDTGIESKFEQLEVLLERHDPTLSKHFRMIGLEAHFYSLRWITTLFCREFTLPDTIAVWDALFADKDFSDFILYFCLSMLMEQRQEMLRCSFAKCLQSLQAYSPEAEMKRLLHRMRSLRAQDSASGFRVDRRVGEAATPSTSRVRNYFSRVSSRMRDDVPIALGSFSTESKSHLKRAGAQLKASFGSMRKLIGDSMSVLPSPGATGGAPSTT 666
            MHTSRQVNQSADLQYSTVLWEAAFDANKNDDDTEEADLSDEEMREAHGPSLEHSIMVARGGKLCIRVRDDSWILPGTVFVSHFDSVSSQGGKGPIEESGLVGVGDFLVRVNGCDVVGKGARHALALIKDEASADSVSLTFRRLQTSSISREGNRIRSEAGIHLTEQHRVLMFRYLLDSKPIDKRRLASLAGDGIPDVDKHLRPLAWRILLLYLPDEVSLWDAHLKQERAIYYQLVQELTIMTGPAASCPPSASGHVINESEDQNFRGSWRAGDASPRLDTPLCALSSAPSQEGDARNTAGSMKATDPNLTFCQGHPGSAPPLPRSGRGSGELDVSLGSSQDRLPTRPRFDADRSLFNEIRKDVVRTHPDQNFYQDQTFGTARYDALLRILFIYAKTNSGTRYIQGMNELAGTLFYVMSRDSDQEWAEHAEADTMFLFAQLMSQLRDVFIEKMDESDTGIESKFEQLEVLLERHDPTLSKHFRMIGLEAHFYSLRWITTLFCREFTLPDTIAVWDALFADKDFSDFILYFCLSMLMEQRQEMLRCSFAKCLQSLQAYSPEAEMKRLLHRMRSLRAQDSASGFRVDRRVGEAATPSTSRVRNYFSRVSSRMRDDVPIALGSFSTESKSHLKRAGAQLKASFGSMRKLIGDSMSVLPSPGATGGAPSTT
Sbjct:    1 MHTSRQVNQSADLQYSTVLWEAAFDANKNDDDTEEADLSDEEMREAHGPSLEHSIMVARGGKLCIRVRDDSWILPGTVFVSHFDSVSSQGGKGPIEESGLVGVGDFLVRVNGCDVVGKGARHALALIKDEASADSVSLTFRRLQTSSISREGNRIRSEAGIHLTEQHRVLMFRYLLDSKPIDKRRLASLAGDGIPDVDKHLRPLAWRILLLYLPDEVSLWDAHLKQERAIYYQLVQELTIMTGPAASCPPSASGHVINESEDQNFRGSWRAGDASPRLDTPLCALSSAPSQEGDARNTAGSMKATDPNLTFCQGHPGSAPPLPRSGRGSGELDVSLGSSQDRLPTRPRFDADRSLFNEIRKDVVRTHPDQNFYQDQTFGTARYDALLRILFIYAKTNSGTRYIQGMNELAGTLFYVMSRDSDQEWAEHAEADTMFLFAQLMSQLRDVFIEKMDESDTGIESKFEQLEVLLERHDPTLSKHFRMIGLEAHFYSLRWITTLFCREFTLPDTIAVWDALFADKDFSDFILYFCLSMLMEQRQEMLRCSFAKCLQSLQAYSPEAEMKRLLHRMRSLRAQDSASGFRVDRRVGEAATPSTSRVRNYFSRVSSRMRDDVPIALGSFSTESKSHLKRAGAQLKASFGSMRKLIGDSMSVLPSPGATGGAPSTT 666          
BLAST of EWM29662.1 vs. NCBI_GenBank
Match: gi|219127436|ref|XP_002183941.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404664|gb|EEC44610.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 241.891 bits (616), Expect = 1.567e-70
Identity = 143/390 (36.67%), Postives = 211/390 (54.10%), Query Frame = 0
Query:  181 IDKRRLASLAGDGIPDVDKHLRPLAWRILLLYLPDEVSLWDAHLKQERAIYYQLVQELTIMTGPAASCPPSASGHVINESEDQNFRGSWRAGDA--SPRLDTPLCALSSAPSQEGDARNTAGSMKATDPNLTFCQGHPGSAPPLPRSGRGSGELDVSLGSSQDRLPTRPRFDADRSLFNEIRKDVVRTHPDQNFY--QDQTFGTARYDALLRILFIYAKTNSGTRYIQGMNELAGTLFYVMSRDSDQEWAEHAEADTMFLFAQLMSQLRDVFIEKMDESDTGIESKFEQLEVLLERHDPTLSKHFRMIGLEAHFYSLRWITTLFCREFTLPDTIAVWDALFADKDFSDFILYFCLSMLMEQRQEMLRCSFAKCLQSLQAYSPEAEMKRLL 566
            +  R+L+SL   GIPD   H R + WR+LL YLP E+S W+  L+++R +Y+    +  + T                           R GDA    +       + S PS    AR  A  +K ++PNL                   S +LD          P    F    +L +EI KDVVRTHPD +F+   DQ  G  RY AL RILF++AK N G RY+QGMNEL   ++YV++ D+++ W+  AEADT ++   L  +++DVF+  +D++DTGI+ +   L  LL RHDP + +H + +G++A FY++RW TTL  REF LPDTI +WD++FA     +F+ Y C++M+M  R ++L+  F+ CL+ LQ+Y P   M  LL
Sbjct:    5 VQLRKLSSL---GIPDEGSH-RGVVWRVLLGYLPLELSQWEGLLQEKRQLYHSYCADYFVQTHDV------------------------RTGDALRCRKRQRRRGRVVSVPSY---ARWNA--LKVSEPNLK------------------SNDLDK---------PDWKDFIESATLLDEIHKDVVRTHPDLSFFLDPDQNIGDRRYAALERILFVWAKYNQGVRYVQGMNELVSAMYYVLANDTNEIWSAAAEADTYWIMNTLFMEMQDVFVADLDDADTGIQGRMANLHALLTRHDPEVQEHLQELGIDASFYAIRWWTTLLSREFLLPDTIRLWDSMFASTRKDNFLRYVCVTMVMLIRDDLLKGDFSACLRLLQSYPP-CHMDNLL 333          
BLAST of EWM29662.1 vs. NCBI_GenBank
Match: gi|224008877|ref|XP_002293397.1| (RabGAP, TBC domain-containing protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220970797|gb|EED89133.1| RabGAP, TBC domain-containing protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 227.254 bits (578), Expect = 7.708e-65
Identity = 139/374 (37.17%), Postives = 201/374 (53.74%), Query Frame = 0
Query:  202 RPLAWRILLLYLPDEVSLWDAHLKQERAIYYQLVQELTIMTGPAASCPPSASGHVINESEDQNFR--GSWRAGDASPRLDTP-LCALSSAPSQEGDARNTAGSMKATDPNLTFCQGHPGSAPPLPRSGRGSGELDVSLGSSQDRLPTRPRFDADRSLFNEIRKDVVRTHPDQNFYQDQTFGTARYDALLRILFIYAKTNSGTRYIQGMNELAGTLFYVMSRDSDQEWAEHAEADTMFLFAQLMSQLRDVFIEKMDESDTGIESKFEQLEVLLERHDPTLSKHFRMIGLEAHFYSLRWITTLFCREFTLPDTIAVWDALFADKDFSDFILYFCLSMLMEQRQEMLRCSFAKCLQSLQAYSPEAEMKRLLHRMRSL 572
            RPL WR+LL YLP +  LW+  L ++R +Y  LV+EL   T PA             + E++  R   ++   +   R D   +  ++S  + +GD  +   S    DP    C      A   PRS            S +  LPT    D       E+ K    + P Q     +  G  RY AL RILF++AK N G RY+QGMNE+ GTL++V++ DS+++WA  AEADT FLF  LM ++RDVF+  +DE+DTGI  +   +  LL  HDP +  H   +G++  FYS+RW+TTL  REF LPDTI +WD++FA     +F+ Y  ++M+M    ++L+  F+ CL+ LQAY P   + RLL   R+L
Sbjct:    1 RPLVWRVLLGYLPPQTDLWNDVLTRDRKLYANLVKELFSSTCPAPHEIYDEEAMRRRQKEEEEVRRTSAFLEDNRVFRSDERRIGRINSDNTTDGDVDDIP-STPVEDP---MC------AMNTPRSR-----------SRKKPLPTA---DTIMEGMKEMGKKRRESRP-QKMATYRDLGQKRYAALERILFVWAKLNKGVRYVQGMNEIVGTLYFVLAHDSNEDWANEAEADTYFLFNSLMVEMRDVFVPDLDEADTGIHGRISNMITLLALHDPEVRCHLDNVGIDPSFYSVRWLTTLLSREFLLPDTIRLWDSMFASTHKDNFLRYVSVTMVMVIHDQLLQGDFSACLRLLQAYPP-TNLDRLLESSRAL 348          
BLAST of EWM29662.1 vs. NCBI_GenBank
Match: gi|397613335|gb|EJK62159.1| (hypothetical protein THAOC_17243, partial [Thalassiosira oceanica])

HSP 1 Score: 227.254 bits (578), Expect = 1.779e-64
Identity = 104/221 (47.06%), Postives = 149/221 (67.42%), Query Frame = 0
Query:  359 IRKDVVRTHPDQNFYQD--QTFGTARYDALLRILFIYAKTNSGTRYIQGMNELAGTLFYVMSRDSDQEWAEHAEADTMFLFAQLMSQLRDVFIEKMDESDTGIESKFEQLEVLLERHDPTLSKHFRMIGLEAHFYSLRWITTLFCREFTLPDTIAVWDALFADKDFSDFILYFCLSMLMEQRQEMLRCSFAKCLQSLQAYSPEAEMKRLLHRMRSLRAQDS 577
            +RKDV+RTHPD  F+ +     G  RY AL RILF++AK N G RY+QGMNE+ GTL++V+++DSD+ W+ HAEADT FLF  LM ++RDVF+ ++DE+DTGI  +   +  LL  HDP +  H   +G++  FYS+RW+TTL  REF LPDT+ +WD++FA     +F+ Y  ++M+M  R  +L   F+ CL+ LQAY P  ++  LL   R+L   +S
Sbjct:   72 VRKDVIRTHPDLRFFLEPADNLGQKRYAALERILFVWAKLNKGVRYVQGMNEIVGTLYFVLAQDSDESWSRHAEADTYFLFNALMVEIRDVFMAELDEADTGIHGRISNMITLLSLHDPEVRCHLDEVGIDPSFYSVRWLTTLLSREFLLPDTVRLWDSMFASTHKDNFLRYVSVTMVMVIRDRLLAGDFSACLRLLQAYPP-PDLDMLLESSRALWIYES 291          
BLAST of EWM29662.1 vs. NCBI_GenBank
Match: gi|397584517|gb|EJK52996.1| (hypothetical protein THAOC_27644, partial [Thalassiosira oceanica])

HSP 1 Score: 230.335 bits (586), Expect = 2.680e-63
Identity = 103/216 (47.69%), Postives = 147/216 (68.06%), Query Frame = 0
Query:  359 IRKDVVRTHPDQNFYQD--QTFGTARYDALLRILFIYAKTNSGTRYIQGMNELAGTLFYVMSRDSDQEWAEHAEADTMFLFAQLMSQLRDVFIEKMDESDTGIESKFEQLEVLLERHDPTLSKHFRMIGLEAHFYSLRWITTLFCREFTLPDTIAVWDALFADKDFSDFILYFCLSMLMEQRQEMLRCSFAKCLQSLQAYSPEAEMKRLLHRMRSL 572
            +RKDV+RTHPD  F+ +     G  RY AL RILF++AK N G RY+QGMNE+ GTL++V+++DSD+ W+ HAEADT FLF  LM ++RDVF+ ++DE+DTGI  +   +  LL  HDP +  H   +G++  FYS+RW+TTL  REF LPDT+ +WD++FA     +F+ Y  ++M+M  R  +L   F+ CL+ LQAY P  ++  LL   R+L
Sbjct:  301 VRKDVIRTHPDLRFFLEPADNLGQKRYAALERILFVWAKLNKGVRYVQGMNEIVGTLYFVLAQDSDESWSRHAEADTYFLFNALMVEIRDVFMAELDEADTGIHGRISNMITLLSLHDPEVRCHLDEVGIDPSFYSVRWLTTLLSREFLLPDTVRLWDSMFASTHKDNFLRYVSVTMVMVIRDRLLAGDFSACLRLLQAYPP-PDLDMLLESSRAL 515          
BLAST of EWM29662.1 vs. NCBI_GenBank
Match: gi|676396471|ref|XP_009041513.1| (hypothetical protein AURANDRAFT_33549, partial [Aureococcus anophagefferens] >gi|323447876|gb|EGB03783.1| hypothetical protein AURANDRAFT_33549, partial [Aureococcus anophagefferens])

HSP 1 Score: 217.624 bits (553), Expect = 2.741e-61
Identity = 111/262 (42.37%), Postives = 167/262 (63.74%), Query Frame = 0
Query:  325 SGRGSGELDVSLG---SSQDRLPTRPRFDADRSLFNEIRKDVVRTHPDQNFYQDQTFGTARYDALLRILFIYAKTNSGTRYIQGMNELAGTLFYVMSRDSDQEWAEHAEADTMFLFAQLMSQLRDVFIEKMDESDTGIESKFEQLEVLLERHDPTLSKHFRMIGLEAHFYSLRWITTLFCREFTLPDTIAVWDALFADKDFSDFILYFCLSMLMEQRQEMLRCSFAKCLQSLQAYSPEAEMKRLLHRMRSLRAQDSASGFRV 583
            + R S  +D+  G   + Q  + T+ + D    L  EI KD++RTHPD +F++    GT R  ++ RILFIYAK N G RY+QGMNE+ GT+FYV++ DS++EW  +AE D  F F  +M+++RDV+I  +D SD G+  K  +L  LL++HDP L +H     L+  +YSLRWITTL  REFTL DTI +WD + ++    DF+ +FCL+M++ QR+ +L   F+ CL  LQ Y P ++   LL +   L+ + +A+ +R+
Sbjct:   80 ASRASVVMDIYQGPMTTHQSSMWTQKQHDY--VLRKEIHKDIMRTHPDHHFFEG---GTLRRQSMERILFIYAKLNPGVRYVQGMNEVLGTIFYVLASDSNEEWGANAEPDAFFCFTNIMAEMRDVYIHSLDNSDAGLSGKMSRLNALLQQHDPELWRHLDKNQLDPSYYSLRWITTLLAREFTLIDTIRLWDTILSEISRVDFLCHFCLTMILAQRETLLAGDFSFCLYLLQNY-PASDPNVLLKQTHILQ-RPNANDYRL 334          
BLAST of EWM29662.1 vs. NCBI_GenBank
Match: gi|308477957|ref|XP_003101191.1| (hypothetical protein CRE_14775 [Caenorhabditis remanei] >gi|308264119|gb|EFP08072.1| hypothetical protein CRE_14775 [Caenorhabditis remanei])

HSP 1 Score: 215.698 bits (548), Expect = 1.064e-59
Identity = 138/432 (31.94%), Postives = 216/432 (50.00%), Query Frame = 0
Query:  175 LLDSKPIDKRRLASLAGDGIPDVDKHLRPLAWRILLLYLPDEVSLWDAHLKQERAIYYQLVQELTIMTGPAASCPPSASGHVINESEDQNFRGSWRAGDASPRLDTPLCALSSAPSQEGDARNTAGSMKATDPNLTFCQ-----GHP-GSAPPLPRSGRGSGELDVSLGSSQDRLPTRPRFDADRS-LFNEIRKDVVRTHPDQNFYQDQTFGTARYDALLRILFIYAKTNSGTRYIQGMNELAGTLFYVMSRDSDQEWAEHAEADTMFLFAQLMSQLRDVFIEKMDESDTGIESKFEQLEVLLERHDPTLSKHFRM-IGLEAHFYSLRWITTLFCREFTLPDTIAVWDALFADKDFSDFILYFCLSMLMEQRQEMLRCSFAKCLQSLQAYSPEAEMKRLLHRMRSLRAQDSASGFRVDRRVGEAATPSTSRV 598
            L+ +K ID   L +    G+P+    LRPLAWR+LL YLP E   W + L  +R  Y Q+++++ +  G A+          + +S+  +        +  P  D P    S+              ++   P + F Q      HP G   PL R      ELD               F A+R  +   ++ ++ +++ D+N   D  F    +  + RILFIYAK N G +Y+QGMNEL   ++YV + D+D+EWA +AEADT F F QLMS+++D FI+ +D+S  GIES       ++   DP L KH  + + ++  FY+ RW++ L  +EF LPD I +WDALF+D      + Y CL+M+  QR+ +L+  F  C++ LQ Y P++++ R++              F  D R G+A  P+   V
Sbjct:   17 LIANKKIDINDLRAGCSYGVPE---SLRPLAWRLLLQYLPLERHKWQSFLANQRMNYDQMIEQVIVEPGTAS----------MEQSKSHD--------NDHPLSDNPTSDWSAFFQDNKVLSQIDKDVRRLYPEIQFFQLLSKFPHPHGMKYPLSRRVINHQELDTQ------------EFGANRDGIVGCVKTNLAKSNQDENQAPDSEF---HWHIVERILFIYAKLNPGVQYVQGMNELVAPIYYVFANDADEEWAAYAEADTFFCFQQLMSEVKDNFIKTLDDSICGIESSMSAFHNMISTFDPELHKHLTLTLEIKPQFYAFRWLSLLLSQEFPLPDVITLWDALFSDPQRFALLPYVCLAMMELQREPLLKGDFPFCVRLLQNY-PDSDVARIV-------------AFAQDIRDGKAPKPTVKEV 398          
BLAST of EWM29662.1 vs. NCBI_GenBank
Match: gi|167516772|ref|XP_001742727.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163779351|gb|EDQ92965.1| predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 207.223 bits (526), Expect = 1.545e-56
Identity = 132/413 (31.96%), Postives = 208/413 (50.36%), Query Frame = 0
Query:  167 HRVLMFRYLLDSKPIDKRRLASLAGDGIPDVDKHLRPLAWRILLLYLPDEVSLWDAHLKQERAIYYQLVQELTIMTGPAASCPPSASGHVINESEDQNFRGSWRAGDASPRLDTPLCALSSAPSQEGDARNTAGSMKATDPNLTFCQGHPG----SAPPLPRSGRGSGELDVSLGSSQDRLPTRPRFDADRSLFNEIRKDVVRTHPDQNFYQDQTFGTARYDALLRILFIYAKTNSGTRYIQGMNELAGTLFYVMSRDSDQEWAEHAEADTMFLFAQLMSQLRDVFIEKMDESDTGIESKFEQLEVLLERHDPTLSKHFRMIGLEAHFYSLRWITTLFCREFTLPDTIAVWDALFADKDFSDFILYFCLSMLMEQRQEMLRCSFAKCLQSLQAYSPEAEMKRLLHRMRSLRAQ 575
            HR   +  L+    ID   L S    G+P++ K  R L W++LL YLP   ++WD HL++ R  Y   ++E   + G       S SG +          GS  A   +P L T L         E         ++  +P+ +F Q   G    S  PL    + +     ++ +++D L T  R    RSL +          P+    +  +     ++ + RILFIYAK N G +Y+QGMNE+ G +++  + D D  W++HAEAD  F F  LMS++RDVFI+ +D+S+TGI +   +LEVLL  H P L++  + + L+  FY+ RW+T L  +EF LPD + +WD LFA     D +L+ C++ML      +L   FA C+++LQ Y  + ++  +L+    LR +
Sbjct:   33 HRADDYHELMAESEIDLEHLQSFCRGGVPEI-KGARSLCWKVLLFYLPSNKAIWDEHLQRSRDQYQDFIEEF--INGS------SVSGAM---------AGSLSATAHAPHLLTALGRDDFFHDNEV-LTQINKDVRRLNPDFSFFQQPTGRPRPSREPLSHRVQQAVLESATIVTNRDGLQTIKR--CVRSLSS--------AGPNDMMVEPASGDERHWEVIERILFIYAKLNPGIKYVQGMNEILGPIYFCFAMDPDLTWSQHAEADAFFCFTNLMSEIRDVFIKTLDDSETGIGALMARLEVLLAEHRPDLAESLQNMSLKPQFYAFRWLTLLLSQEFKLPDLMRLWDTLFASSSRLDTLLHVCIAMLELCGDIILAEDFAACVKTLQNYPSDIDVTTILYNAERLRTE 416          
BLAST of EWM29662.1 vs. NCBI_GenBank
Match: gi|908422170|ref|XP_013072457.1| (PREDICTED: TBC1 domain family member 13-like isoform X1 [Biomphalaria glabrata] >gi|908422172|ref|XP_013072458.1| PREDICTED: TBC1 domain family member 13-like isoform X2 [Biomphalaria glabrata])

HSP 1 Score: 206.068 bits (523), Expect = 2.393e-56
Identity = 134/416 (32.21%), Postives = 212/416 (50.96%), Query Frame = 0
Query:  166 QHRVLMFRYLLDSKPIDKRRLASLAG-DGIPDVDKHLRPLAWRILLLYLPDEVSLWDAHLKQERAIYYQLVQELTIMTGPAASCPPSASG----HVINESEDQNFRGSWRAGDASPRLDTPLCALSSAPSQEGDARNTAGSMKATDPNLTFCQG---HPGSAPPLPRSGRGSGELDVSLGSSQDRLPTRPRFDADRSLFNEIRKDVVRTHPDQNFYQDQTFGT-ARYDALLRILFIYAKTNSGTRYIQGMNELAGTLFYVMSRDSDQEWAEHAEADTMFLFAQLMSQLRDVFIEKMDESDTGIESKFEQLEVLLERHDPTLSKHFRMIGLEAHFYSLRWITTLFCREFTLPDTIAVWDALFADKDFSDFILYFCLSMLMEQRQEMLRCSFAKCLQSLQAYSPEAEMKRLLHRMRSL 572
            Q R+  F  LL++  ID + L +L    G P  +K +R + W+I L Y+P E   W+  L+++R +Y Q ++E+ I+ G       SA+G    H +N + D  +R ++R  +   ++D              D R          P+L+F Q    +P        S   +    V     Q     + R        N + K   RTH D+  Y     G  A ++ + RILF+YAK N G  Y+QGMNE+ G ++Y  + D DQ + EHAEAD+ F F  LMS++RD FI+ +D+S  GI SK  QL  +L+  D  L +  +   L   FY+ RWIT L  +EF LPD + +WD+LFAD    +F++Y C ++L+  RQ++L+  F   ++ +Q    E +++++L + R L
Sbjct:    5 QQRLKCFEDLLEADVIDLKALRNLCFISGCPH-EKSIRSICWKIFLNYIPLEKRKWNDVLQKQRNLYKQYIEEIIILPGKKMKSKESANGELEDHPLNPNPDSEWRETFRDNEMLLQID-------------KDCRRLC-------PDLSFFQQATEYPCEVLINSSSSVENLRKRVEQCVLQSETVAKNRLGIT---LNVVSKK--RTHSDE--YSVLPDGKEAHWEVVERILFLYAKLNPGLNYVQGMNEILGPIYYTFATDPDQNYREHAEADSFFCFTCLMSEIRDFFIKTLDDSQFGIGSKMNQLMEMLKELDRPLWQRLQDQELRPQFYAFRWITLLLSQEFQLPDVLRIWDSLFADSHRFEFLIYICCAILISVRQDILKNDFPSNMKLVQRVESEIDLRQVLAKAREL 392          
BLAST of EWM29662.1 vs. NCBI_GenBank
Match: gi|341890795|gb|EGT46730.1| (hypothetical protein CAEBREN_05292 [Caenorhabditis brenneri])

HSP 1 Score: 205.682 bits (522), Expect = 1.008e-55
Identity = 139/436 (31.88%), Postives = 211/436 (48.39%), Query Frame = 0
Query:  175 LLDSKPIDKRRLASLAGDGIPDVDKHLRPLAWRILLLYLPDEVSLWDAHLKQERAIYYQLVQELTIMTGPAASCPPSASGHVINESEDQNFRGSWRAGDASPRLDTPLCALSSAPSQEGDARNTAGSMKATDPNLTFCQ-----GHP-GSAPPLPRSGRGSGELDVSLGSSQDRLPTRPRFDADRS-LFNEIRKDVVRTH-----PDQNFYQDQTFGTA----RYDALLRILFIYAKTNSGTRYIQGMNELAGTLFYVMSRDSDQEWAEHAEADTMFLFAQLMSQLRDVFIEKMDESDTGIESKFEQLEVLLERHDPTLSKHF-RMIGLEAHFYSLRWITTLFCREFTLPDTIAVWDALFADKDFSDFILYFCLSMLMEQRQEMLRCSFAKCLQSLQAYSPEAEMKRLLHRMRSLRAQDSASGFRVDRRVGEAATP 593
            L+ +K ID   L +    G+P+    LRPLAWR+LL YLP E   W   L ++R  Y  +++++ +  G A     S + + + E ED +           P  D P    S+              ++   P + F Q      HP G   PL R      EL            T   F A+R  +   ++  V ++      P+  F+   +  TA     +  + RILFIYAK N G +Y+QGMNEL   ++YV + DSD+EWA +AEADT F F QLMS+++D FI+ +D+S  GIES       ++   D  L KH    + ++  FY+ RW++ L  +EF LPD I +WDALF+D      + Y CL+M+  QR+ +L+  F  C++ LQ Y P+ ++ +++              F  D R G+A  P
Sbjct:   17 LIANKKIDLNELRAGCSYGVPE---SLRPLAWRLLLHYLPLERHDWQKFLAEQRKNYDDMIEQIIVEPGTA-----SMAINSVQEEEDHD----------HPLSDHPTSDWSAFFQDNKVLSQIDKDVRRLYPEIQFFQLLSKFPHPHGMKYPLSRRVINHQEL------------TSQEFGANRDGIVGCVKTKVAKSQDENQAPNSEFHWHFSLLTALLNSNFQIVERILFIYAKLNPGVQYVQGMNELVAPIYYVFANDSDEEWAAYAEADTFFCFQQLMSEVKDNFIKTLDDSICGIESSMSAFHNMISSFDSELHKHLTSTLEIKPQFYAFRWLSLLLSQEFPLPDVITLWDALFSDPQRFALLQYVCLAMMELQRESLLQGDFPFCVRLLQNY-PDTDVAKIV-------------AFAQDIRDGKATRP 408          
The following BLAST results are available for this feature:
BLAST of EWM29662.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112236|gb|EWM29662.1|0.000e+0100.00tbc domain-containing protein [Nannochloropsis gad... [more]
gi|219127436|ref|XP_002183941.1|1.567e-7036.67predicted protein, partial [Phaeodactylum tricornu... [more]
gi|224008877|ref|XP_002293397.1|7.708e-6537.17RabGAP, TBC domain-containing protein, partial [Th... [more]
gi|397613335|gb|EJK62159.1|1.779e-6447.06hypothetical protein THAOC_17243, partial [Thalass... [more]
gi|397584517|gb|EJK52996.1|2.680e-6347.69hypothetical protein THAOC_27644, partial [Thalass... [more]
gi|676396471|ref|XP_009041513.1|2.741e-6142.37hypothetical protein AURANDRAFT_33549, partial [Au... [more]
gi|308477957|ref|XP_003101191.1|1.064e-5931.94hypothetical protein CRE_14775 [Caenorhabditis rem... [more]
gi|167516772|ref|XP_001742727.1|1.545e-5631.96hypothetical protein [Monosiga brevicollis MX1] >g... [more]
gi|908422170|ref|XP_013072457.1|2.393e-5632.21PREDICTED: TBC1 domain family member 13-like isofo... [more]
gi|341890795|gb|EGT46730.1|1.008e-5531.88hypothetical protein CAEBREN_05292 [Caenorhabditis... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1002rna1002Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications