EWM20662.1, cds10006 (CDS) Nannochloropsis gaditana

Overview
NameEWM20662.1
Unique Namecds10006
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037260.1:66634..66641 +
Alignment locationKK037260.1:66918..67023 +
Alignment locationKK037260.1:67233..67400 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20662.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100172g1.4635.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037260.1supercontigKK037260.1:66634..66641 +
KK037260.1supercontigKK037260.1:66918..67023 +
KK037260.1supercontigKK037260.1:67233..67400 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20662.1 vs. NCBI_GenBank
Match: gi|585100467|gb|EWM20662.1| (hypothetical protein Naga_100172g1 [Nannochloropsis gaditana])

HSP 1 Score: 190.66 bits (483), Expect = 1.641e-61
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 
Query:    1 MAGRLVCDPARVVALPPQRLGGGCLGAPHAGRWPLHPHALPRHPLFQSQQMASNRVSLRRGGKNKKKEGLSNTDFALRHNDGSTNEREGRDLH 93
            MAGRLVCDPARVVALPPQRLGGGCLGAPHAGRWPLHPHALPRHPLFQSQQMASNRVSLRRGGKNKKKEGLSNTDFALRHNDGSTNEREGRDLH
Sbjct:    1 MAGRLVCDPARVVALPPQRLGGGCLGAPHAGRWPLHPHALPRHPLFQSQQMASNRVSLRRGGKNKKKEGLSNTDFALRHNDGSTNEREGRDLH 93
The following BLAST results are available for this feature:
BLAST of EWM20662.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100467|gb|EWM20662.1|1.641e-61100.00hypothetical protein Naga_100172g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10037rna10037Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications