EWM20670.1, cds10003 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|585100476|gb|EWM20670.1| (atp-binding cassette sub-family g member 2 [Nannochloropsis gaditana]) HSP 1 Score: 454.521 bits (1168), Expect = 1.154e-161 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
Query: 1 MVAYMIIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKKKS 224
MVAYMIIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKKKS
Sbjct: 1 MVAYMIIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKKKS 224
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|585104330|gb|EWM23323.1| (atp-binding cassette sub-family g member 2 [Nannochloropsis gaditana]) HSP 1 Score: 389.423 bits (999), Expect = 3.986e-129 Identity = 186/223 (83.41%), Postives = 206/223 (92.38%), Query Frame = 0
Query: 1 MVAYMIIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGK-VAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKK 222
MVAYMIIFSAITSLELFIQER+LFVHEKTSGFYRTSAYF+AK++CEILPTR+VPT+F+A++TA+MAGLRTDFYHL +YWLTL VTSITSTSLCLLVSCATSVYSAAF+GCGA Y++FMLASGFVLQADQIP YLAPFKYLSFYRYCLQNLL+LDL RVFDC TPE+L V+ICLPTGDLYL+SQGINPD++W NIGILAAM P YL IAYLFLRSLKK
Sbjct: 493 MVAYMIIFSAITSLELFIQERALFVHEKTSGFYRTSAYFLAKVVCEILPTRMVPTLFYAVVTAYMAGLRTDFYHLSLYWLTLTVTSITSTSLCLLVSCATSVYSAAFMGCGAFYIVFMLASGFVLQADQIPVYLAPFKYLSFYRYCLQNLLALDLHNRVFDCPTPEELMADPTLVSICLPTGDLYLQSQGINPDNIWKNIGILAAMTPAYLFIAYLFLRSLKK 715
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|1005429993|ref|XP_015752742.1| (PREDICTED: ATP-binding cassette sub-family G member 2-like [Acropora digitifera]) HSP 1 Score: 152.91 bits (385), Expect = 1.777e-39 Identity = 83/219 (37.90%), Postives = 129/219 (58.90%), Query Frame = 0
Query: 6 IIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKKKS 224
+IF ++++ELFI+ER +F+HE SG+YR S YF+AK+LC+++P RLVP F+LI FM GL D F++ LTL + S+ ++S+ VS ++ A L G Y+ M+ G ++ + ++LA KY+S +RY +++L +L F C P+ CL GD YL+ QG+ D LW N +LA M + +G AY+ LR +KK+
Sbjct: 410 MIFGNLSAVELFIKERPIFIHECASGYYRISVYFLAKVLCDVIPLRLVPITVFSLIAYFMIGLDRDIDKFFIFTLTLLLASLCASSVAFFVSACVRTFAIANLLVGLPYVFMMVFGGVLINLKSVLSWLAWIKYISIFRYAIESLEINELHNMEFSC--PKN------TTNCLRFGDQYLKLQGVKVDDLWYNELVLAVMTVIIMGFAYIALRLIKKEK 620
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|585109740|gb|EWM27479.1| (atp-binding cassette sub-family g member 2 [Nannochloropsis gaditana]) HSP 1 Score: 148.673 bits (374), Expect = 1.126e-37 Identity = 81/220 (36.82%), Postives = 135/220 (61.36%), Query Frame = 0
Query: 5 MIIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAI-CL-PTGDLYLESQGINP-DHLWMNIGILAAMIPVYLGIAYLFLRSLK 221
M +FS I++LELFI+ER++FVHEK +G YR +AYF AK LC+I+P R++P +FF M GLR+ F H ++ T+ ++ + + +LCL+VS +++ A LG +++LF++ G ++ +Q+P +L PFKY+S +RY ++ + +L G F+C V G+V CL +GD+YL Q LW N+ +A + + + +L LR ++
Sbjct: 533 MCMFSNISALELFIEERAVFVHEKANGCYRPAAYFWAKSLCDIVPLRVIPAVFFCASVYPMMGLRSGFDHWLLFTATVILSMLAAAALCLMVSSWVPIFAVANLGVALIFILFLITGGVLINFEQLPAWLLPFKYVSIFRYAMEVMSVNELTGLKFECPP----GVDGEVPTGCLGGSGDVYLALQHYPRFADLWKNLLAIAGIFVACMALTFLSLRRIR 748
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|1174743534|gb|OQV11982.1| (ATP-binding cassette sub-family G member 2 [Hypsibius dujardini]) HSP 1 Score: 146.747 bits (369), Expect = 3.126e-37 Identity = 82/220 (37.27%), Postives = 129/220 (58.64%), Query Frame = 0
Query: 6 IIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGI---NPDHLWMNIGILAAMIPVYLGIAYLFLRSLKK 222
+IF + ++ELFI+ER++F+HE SG+YR S+YF+AK+LC+++P R +P + F I +M G ++D F++ LT+ + ++ ++L S V++ A L Y+ ML GFV+ + ++L K+LSF+RY L +L G+ F Y V ++ CLP GD YL +QGI + LW NI LA+M + L +AY+ LR LKK
Sbjct: 422 LIFGNLDAVELFIKERAIFIHENASGYYRVSSYFLAKVLCDMIPRRTIPPLIFCAIAYYMIGFQSDVEKFFIFSLTMVLVAVAGSALAFFFSATVQVFAIANLLIALCYVFMMLFGGFVVNVGSVLSWLQWIKWLSFFRYGLNAASINELHGKEFCDYD-----VKRNISDCLP-GDAYLTAQGIPFGSAWDLWQNILALASMAVIMLVLAYVQLRRLKK 635
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|1191060254|ref|XP_020908367.1| (ATP-binding cassette sub-family G member 2-like [Exaiptasia pallida]) HSP 1 Score: 145.206 bits (365), Expect = 1.125e-36 Identity = 78/219 (35.62%), Postives = 126/219 (57.53%), Query Frame = 0
Query: 6 IIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKKKS 224
++F ++++ELFI+ER +F+HE G+YR S YF+AK+LC+++P RLVP F+ I FM G + F++ LTL +TS+ + L VS + + ++ A L Y+ M+ SG ++ + +L+ KY+S +RY +++L + +L+G VF C T IC P+GD YL Q + LW + L M +YL AY+ LR +KK+
Sbjct: 397 MVFGNLSAVELFIKERKIFLHESAGGYYRVSVYFLAKVLCDLIPMRLVPITGFSAIVYFMIGFQRTVEKFFIFALTLVLTSLCACGLSFFVSASVTTFANANLLIALPYVFMMVFSGVLVNLGSVGKWLSWVKYISIFRYAIESLEANELEGMVFHCGTNN--------TIC-PSGDDYLARQDVKASDLWYDELALGVMTCIYLLFAYIALRLIKKEK 606
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|908476067|ref|XP_013090268.1| (PREDICTED: ATP-binding cassette sub-family G member 2-like [Biomphalaria glabrata]) HSP 1 Score: 144.05 bits (362), Expect = 4.649e-36 Identity = 75/219 (34.25%), Postives = 130/219 (59.36%), Query Frame = 0
Query: 7 IFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPD---HLWMNIGILAAMIPVYLGIAYLFLRSLKK 222
+F ++++ELFI+ER++F+HE SG+YR SAYF+AK+ C+++P R++P I F++I FM GLR H F + L + +T+IT+++LC +S + + A L Y+ ML G ++ + ++++ KYLS +RY L L +L+G++F +G I +G+ +L +Q I+ + LW N L M ++L +AY+ LR ++K
Sbjct: 478 VFGNMSAVELFIKERAIFIHENVSGYYRVSAYFLAKVFCDVIPLRMIPVILFSVIVYFMFGLRDGADHFFFFTLNMFLTAITASTLCFAISSSVKILGLANLFLAMCYVFMMLFGGLLINVGDLGHWISWVKYLSIFRYSLNALEINELQGQMF--------CSNGTDCI---SGNDHLTNQKISFETKWDLWQNEVALVIMTVIFLILAYVQLRRIQK 685
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|443686518|gb|ELT89768.1| (hypothetical protein CAPTEDRAFT_173115 [Capitella teleta]) HSP 1 Score: 142.895 bits (359), Expect = 7.062e-36 Identity = 77/219 (35.16%), Postives = 127/219 (57.99%), Query Frame = 0
Query: 7 IFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPD---HLWMNIGILAAMIPVYLGIAYLFLRSLKK 222
IF ++++++FI++R++F+HE SGFYR S YF AK+LC+++P R +P F+LI+ +M GL+ DF H F + L +T + TS+ LL S S ++ + V++ ++ +G ++ + +P +L K+ S +RY + L +LKG F C E S + C TGD Y++ QGI D LW+N LA + +L + Y+ LR +KK
Sbjct: 397 IFGNMSAVDMFIKDRAIFIHENISGFYRVSTYFFAKMLCDVMPQRFIPITVFSLISYWMIGLQNDFMHFFFFCLNTILTCMAGTSVALLFSATMSTHTVGTILTALVWVFMLVFNGLLVNIETVPRFLRWGKHFSIFRYSMNGFLVNELKGLEF-CGEIENGNSS--IRSCT-TGDAYMKGQGIAHDSAWDLWLNPFGLAMLSLFFLSVTYVQLRRMKK 611
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|1176085439|ref|XP_020612979.1| (ATP-binding cassette sub-family G member 2-like [Orbicella faveolata]) HSP 1 Score: 139.043 bits (349), Expect = 2.402e-34 Identity = 81/218 (37.16%), Postives = 130/218 (59.63%), Query Frame = 0
Query: 6 IIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKKK 223
+IF ++++ELFI+ER +F+HE SG+YR S YF+AK++C+++P RLVP F+ I FM GL TD ++ LTL +TS+ + + VS ++ A L Y+ M+ G ++ + + ++L+ KY+S +RY +++L +L G F C P +V G+ C+ GD YL SQGI+ LW N LA+M + + AY+ LR +KK+
Sbjct: 454 MIFGNLSAVELFIKERPIFIHESASGYYRISVYFLAKVICDLIPLRLVPIAGFSAIVYFMTGLDTDVTKFLIFTLTLLLTSLCACGVAFFVSACVRTFAIANLLIALPYVFMMVFGGVLVNLNSVLDWLSWIKYVSIFRYAIESLEINELHGMNFTC--PRNASVFGQ---CVSRGDEYLASQGISVSDLWYNEIALASMTVILMTFAYIALRLIKKE 666
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|675865522|ref|XP_009018321.1| (hypothetical protein HELRODRAFT_100028 [Helobdella robusta] >gi|555700531|gb|ESO03764.1| hypothetical protein HELRODRAFT_100028 [Helobdella robusta]) HSP 1 Score: 138.272 bits (347), Expect = 3.946e-34 Identity = 77/219 (35.16%), Postives = 130/219 (59.36%), Query Frame = 0
Query: 7 IFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPD---HLWMNIGILAAMIPVYLGIAYLFLRSLKK 222
+FS ++ +ELFI+ER +F+HE SG+YR S+YF +K+LC+I+P R++P F+ I FM GL+ F+++LTL +TS+ S+ +++S + SV + A L +Y+L ML G ++ + + ++L+ +YLS R+ + L +LKG V + ++G G+ +L++QGI + W NI L MI +L +AY+ LR +KK
Sbjct: 398 VFSNMSVVELFIRERHIFIHESASGYYRVSSYFFSKVLCDIIPMRVLPVTIFSPICYFMIGLQPSADKFFIFYLTLFLTSMAGASVGIMISSSVSVLTVANLIIVLIYVLMMLFGGLLVNLETMADWLSWLQYLSIVRFSMNALSINELKGLVL------KKTINGTEITIRGIGEEFLQNQGIKYETDWDFWQNIMALTIMIIAFLILAYVQLRRMKK 610 The following BLAST results are available for this feature:
BLAST of EWM20670.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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