EWM20670.1, cds10003 (CDS) Nannochloropsis gaditana

Overview
NameEWM20670.1
Unique Namecds10003
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037260.1:60562..60618 +
Alignment locationKK037260.1:60877..60945 +
Alignment locationKK037260.1:61419..61488 +
Alignment locationKK037260.1:61628..61681 +
Alignment locationKK037260.1:61811..61942 +
Alignment locationKK037260.1:62135..62271 +
Alignment locationKK037260.1:62544..62699 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20670.1
Productatp-binding cassette sub-family g member 2
Orig transcript idgnl|cribi|Naga_100766g3.3158.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037260.1supercontigKK037260.1:60562..60618 +
KK037260.1supercontigKK037260.1:60877..60945 +
KK037260.1supercontigKK037260.1:61419..61488 +
KK037260.1supercontigKK037260.1:61628..61681 +
KK037260.1supercontigKK037260.1:61811..61942 +
KK037260.1supercontigKK037260.1:62135..62271 +
KK037260.1supercontigKK037260.1:62544..62699 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR013525ABC_2_trans
Homology
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|585100476|gb|EWM20670.1| (atp-binding cassette sub-family g member 2 [Nannochloropsis gaditana])

HSP 1 Score: 454.521 bits (1168), Expect = 1.154e-161
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
Query:    1 MVAYMIIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKKKS 224
            MVAYMIIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKKKS
Sbjct:    1 MVAYMIIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKKKS 224          
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|585104330|gb|EWM23323.1| (atp-binding cassette sub-family g member 2 [Nannochloropsis gaditana])

HSP 1 Score: 389.423 bits (999), Expect = 3.986e-129
Identity = 186/223 (83.41%), Postives = 206/223 (92.38%), Query Frame = 0
Query:    1 MVAYMIIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGK-VAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKK 222
            MVAYMIIFSAITSLELFIQER+LFVHEKTSGFYRTSAYF+AK++CEILPTR+VPT+F+A++TA+MAGLRTDFYHL +YWLTL VTSITSTSLCLLVSCATSVYSAAF+GCGA Y++FMLASGFVLQADQIP YLAPFKYLSFYRYCLQNLL+LDL  RVFDC TPE+L      V+ICLPTGDLYL+SQGINPD++W NIGILAAM P YL IAYLFLRSLKK
Sbjct:  493 MVAYMIIFSAITSLELFIQERALFVHEKTSGFYRTSAYFLAKVVCEILPTRMVPTLFYAVVTAYMAGLRTDFYHLSLYWLTLTVTSITSTSLCLLVSCATSVYSAAFMGCGAFYIVFMLASGFVLQADQIPVYLAPFKYLSFYRYCLQNLLALDLHNRVFDCPTPEELMADPTLVSICLPTGDLYLQSQGINPDNIWKNIGILAAMTPAYLFIAYLFLRSLKK 715          
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|1005429993|ref|XP_015752742.1| (PREDICTED: ATP-binding cassette sub-family G member 2-like [Acropora digitifera])

HSP 1 Score: 152.91 bits (385), Expect = 1.777e-39
Identity = 83/219 (37.90%), Postives = 129/219 (58.90%), Query Frame = 0
Query:    6 IIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKKKS 224
            +IF  ++++ELFI+ER +F+HE  SG+YR S YF+AK+LC+++P RLVP   F+LI  FM GL  D    F++ LTL + S+ ++S+   VS     ++ A L  G  Y+  M+  G ++    + ++LA  KY+S +RY +++L   +L    F C  P+          CL  GD YL+ QG+  D LW N  +LA M  + +G AY+ LR +KK+ 
Sbjct:  410 MIFGNLSAVELFIKERPIFIHECASGYYRISVYFLAKVLCDVIPLRLVPITVFSLIAYFMIGLDRDIDKFFIFTLTLLLASLCASSVAFFVSACVRTFAIANLLVGLPYVFMMVFGGVLINLKSVLSWLAWIKYISIFRYAIESLEINELHNMEFSC--PKN------TTNCLRFGDQYLKLQGVKVDDLWYNELVLAVMTVIIMGFAYIALRLIKKEK 620          
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|585109740|gb|EWM27479.1| (atp-binding cassette sub-family g member 2 [Nannochloropsis gaditana])

HSP 1 Score: 148.673 bits (374), Expect = 1.126e-37
Identity = 81/220 (36.82%), Postives = 135/220 (61.36%), Query Frame = 0
Query:    5 MIIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAI-CL-PTGDLYLESQGINP-DHLWMNIGILAAMIPVYLGIAYLFLRSLK 221
            M +FS I++LELFI+ER++FVHEK +G YR +AYF AK LC+I+P R++P +FF      M GLR+ F H  ++  T+ ++ + + +LCL+VS    +++ A LG   +++LF++  G ++  +Q+P +L PFKY+S +RY ++ +   +L G  F+C       V G+V   CL  +GD+YL  Q       LW N+  +A +    + + +L LR ++
Sbjct:  533 MCMFSNISALELFIEERAVFVHEKANGCYRPAAYFWAKSLCDIVPLRVIPAVFFCASVYPMMGLRSGFDHWLLFTATVILSMLAAAALCLMVSSWVPIFAVANLGVALIFILFLITGGVLINFEQLPAWLLPFKYVSIFRYAMEVMSVNELTGLKFECPP----GVDGEVPTGCLGGSGDVYLALQHYPRFADLWKNLLAIAGIFVACMALTFLSLRRIR 748          
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|1174743534|gb|OQV11982.1| (ATP-binding cassette sub-family G member 2 [Hypsibius dujardini])

HSP 1 Score: 146.747 bits (369), Expect = 3.126e-37
Identity = 82/220 (37.27%), Postives = 129/220 (58.64%), Query Frame = 0
Query:    6 IIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGI---NPDHLWMNIGILAAMIPVYLGIAYLFLRSLKK 222
            +IF  + ++ELFI+ER++F+HE  SG+YR S+YF+AK+LC+++P R +P + F  I  +M G ++D    F++ LT+ + ++  ++L    S    V++ A L     Y+  ML  GFV+    + ++L   K+LSF+RY L      +L G+ F  Y      V   ++ CLP GD YL +QGI   +   LW NI  LA+M  + L +AY+ LR LKK
Sbjct:  422 LIFGNLDAVELFIKERAIFIHENASGYYRVSSYFLAKVLCDMIPRRTIPPLIFCAIAYYMIGFQSDVEKFFIFSLTMVLVAVAGSALAFFFSATVQVFAIANLLIALCYVFMMLFGGFVVNVGSVLSWLQWIKWLSFFRYGLNAASINELHGKEFCDYD-----VKRNISDCLP-GDAYLTAQGIPFGSAWDLWQNILALASMAVIMLVLAYVQLRRLKK 635          
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|1191060254|ref|XP_020908367.1| (ATP-binding cassette sub-family G member 2-like [Exaiptasia pallida])

HSP 1 Score: 145.206 bits (365), Expect = 1.125e-36
Identity = 78/219 (35.62%), Postives = 126/219 (57.53%), Query Frame = 0
Query:    6 IIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKKKS 224
            ++F  ++++ELFI+ER +F+HE   G+YR S YF+AK+LC+++P RLVP   F+ I  FM G +      F++ LTL +TS+ +  L   VS + + ++ A L     Y+  M+ SG ++    +  +L+  KY+S +RY +++L + +L+G VF C T           IC P+GD YL  Q +    LW +   L  M  +YL  AY+ LR +KK+ 
Sbjct:  397 MVFGNLSAVELFIKERKIFLHESAGGYYRVSVYFLAKVLCDLIPMRLVPITGFSAIVYFMIGFQRTVEKFFIFALTLVLTSLCACGLSFFVSASVTTFANANLLIALPYVFMMVFSGVLVNLGSVGKWLSWVKYISIFRYAIESLEANELEGMVFHCGTNN--------TIC-PSGDDYLARQDVKASDLWYDELALGVMTCIYLLFAYIALRLIKKEK 606          
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|908476067|ref|XP_013090268.1| (PREDICTED: ATP-binding cassette sub-family G member 2-like [Biomphalaria glabrata])

HSP 1 Score: 144.05 bits (362), Expect = 4.649e-36
Identity = 75/219 (34.25%), Postives = 130/219 (59.36%), Query Frame = 0
Query:    7 IFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPD---HLWMNIGILAAMIPVYLGIAYLFLRSLKK 222
            +F  ++++ELFI+ER++F+HE  SG+YR SAYF+AK+ C+++P R++P I F++I  FM GLR    H F + L + +T+IT+++LC  +S +  +   A L     Y+  ML  G ++    + ++++  KYLS +RY L  L   +L+G++F          +G   I   +G+ +L +Q I+ +    LW N   L  M  ++L +AY+ LR ++K
Sbjct:  478 VFGNMSAVELFIKERAIFIHENVSGYYRVSAYFLAKVFCDVIPLRMIPVILFSVIVYFMFGLRDGADHFFFFTLNMFLTAITASTLCFAISSSVKILGLANLFLAMCYVFMMLFGGLLINVGDLGHWISWVKYLSIFRYSLNALEINELQGQMF--------CSNGTDCI---SGNDHLTNQKISFETKWDLWQNEVALVIMTVIFLILAYVQLRRIQK 685          
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|443686518|gb|ELT89768.1| (hypothetical protein CAPTEDRAFT_173115 [Capitella teleta])

HSP 1 Score: 142.895 bits (359), Expect = 7.062e-36
Identity = 77/219 (35.16%), Postives = 127/219 (57.99%), Query Frame = 0
Query:    7 IFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPD---HLWMNIGILAAMIPVYLGIAYLFLRSLKK 222
            IF  ++++++FI++R++F+HE  SGFYR S YF AK+LC+++P R +P   F+LI+ +M GL+ DF H F + L   +T +  TS+ LL S   S ++   +    V++  ++ +G ++  + +P +L   K+ S +RY +   L  +LKG  F C   E    S  +  C  TGD Y++ QGI  D    LW+N   LA +   +L + Y+ LR +KK
Sbjct:  397 IFGNMSAVDMFIKDRAIFIHENISGFYRVSTYFFAKMLCDVMPQRFIPITVFSLISYWMIGLQNDFMHFFFFCLNTILTCMAGTSVALLFSATMSTHTVGTILTALVWVFMLVFNGLLVNIETVPRFLRWGKHFSIFRYSMNGFLVNELKGLEF-CGEIENGNSS--IRSCT-TGDAYMKGQGIAHDSAWDLWLNPFGLAMLSLFFLSVTYVQLRRMKK 611          
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|1176085439|ref|XP_020612979.1| (ATP-binding cassette sub-family G member 2-like [Orbicella faveolata])

HSP 1 Score: 139.043 bits (349), Expect = 2.402e-34
Identity = 81/218 (37.16%), Postives = 130/218 (59.63%), Query Frame = 0
Query:    6 IIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPDHLWMNIGILAAMIPVYLGIAYLFLRSLKKK 223
            +IF  ++++ELFI+ER +F+HE  SG+YR S YF+AK++C+++P RLVP   F+ I  FM GL TD     ++ LTL +TS+ +  +   VS     ++ A L     Y+  M+  G ++  + + ++L+  KY+S +RY +++L   +L G  F C  P   +V G+   C+  GD YL SQGI+   LW N   LA+M  + +  AY+ LR +KK+
Sbjct:  454 MIFGNLSAVELFIKERPIFIHESASGYYRISVYFLAKVICDLIPLRLVPIAGFSAIVYFMTGLDTDVTKFLIFTLTLLLTSLCACGVAFFVSACVRTFAIANLLIALPYVFMMVFGGVLVNLNSVLDWLSWIKYVSIFRYAIESLEINELHGMNFTC--PRNASVFGQ---CVSRGDEYLASQGISVSDLWYNEIALASMTVILMTFAYIALRLIKKE 666          
BLAST of EWM20670.1 vs. NCBI_GenBank
Match: gi|675865522|ref|XP_009018321.1| (hypothetical protein HELRODRAFT_100028 [Helobdella robusta] >gi|555700531|gb|ESO03764.1| hypothetical protein HELRODRAFT_100028 [Helobdella robusta])

HSP 1 Score: 138.272 bits (347), Expect = 3.946e-34
Identity = 77/219 (35.16%), Postives = 130/219 (59.36%), Query Frame = 0
Query:    7 IFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKILCEILPTRLVPTIFFALITAFMAGLRTDFYHLFMYWLTLAVTSITSTSLCLLVSCATSVYSAAFLGCGAVYLLFMLASGFVLQADQIPNYLAPFKYLSFYRYCLQNLLSLDLKGRVFDCYTPEQLAVSGKVAICLPTGDLYLESQGINPD---HLWMNIGILAAMIPVYLGIAYLFLRSLKK 222
            +FS ++ +ELFI+ER +F+HE  SG+YR S+YF +K+LC+I+P R++P   F+ I  FM GL+      F+++LTL +TS+   S+ +++S + SV + A L    +Y+L ML  G ++  + + ++L+  +YLS  R+ +  L   +LKG V       +  ++G        G+ +L++QGI  +     W NI  L  MI  +L +AY+ LR +KK
Sbjct:  398 VFSNMSVVELFIRERHIFIHESASGYYRVSSYFFSKVLCDIIPMRVLPVTIFSPICYFMIGLQPSADKFFIFYLTLFLTSMAGASVGIMISSSVSVLTVANLIIVLIYVLMMLFGGLLVNLETMADWLSWLQYLSIVRFSMNALSINELKGLVL------KKTINGTEITIRGIGEEFLQNQGIKYETDWDFWQNIMALTIMIIAFLILAYVQLRRMKK 610          
The following BLAST results are available for this feature:
BLAST of EWM20670.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100476|gb|EWM20670.1|1.154e-161100.00atp-binding cassette sub-family g member 2 [Nannoc... [more]
gi|585104330|gb|EWM23323.1|3.986e-12983.41atp-binding cassette sub-family g member 2 [Nannoc... [more]
gi|1005429993|ref|XP_015752742.1|1.777e-3937.90PREDICTED: ATP-binding cassette sub-family G membe... [more]
gi|585109740|gb|EWM27479.1|1.126e-3736.82atp-binding cassette sub-family g member 2 [Nannoc... [more]
gi|1174743534|gb|OQV11982.1|3.126e-3737.27ATP-binding cassette sub-family G member 2 [Hypsib... [more]
gi|1191060254|ref|XP_020908367.1|1.125e-3635.62ATP-binding cassette sub-family G member 2-like [E... [more]
gi|908476067|ref|XP_013090268.1|4.649e-3634.25PREDICTED: ATP-binding cassette sub-family G membe... [more]
gi|443686518|gb|ELT89768.1|7.062e-3635.16hypothetical protein CAPTEDRAFT_173115 [Capitella ... [more]
gi|1176085439|ref|XP_020612979.1|2.402e-3437.16ATP-binding cassette sub-family G member 2-like [O... [more]
gi|675865522|ref|XP_009018321.1|3.946e-3435.16hypothetical protein HELRODRAFT_100028 [Helobdella... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10034rna10034Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications