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  2. N. oceanica IMET1

N. oceanica IMET1

Overview
Full NameNannochloropsis oceanica subspecies IMET1
GenusNannochloropsis
Speciesoceanica
Infraspecific Ranksubspecies
Infraspecific NameIMET1
Common NameN. oceanica IMET1
AbbreviationNoIMET1

Gene locus nomenclature for N. oceanica IMET1 (IMET1v2):

For nuclear genes:

  • NO (Nannochlropsis oceanica);
  • 01,02,03-30 (chromosome number);
  • G (gene);
  • 01230 (five-digit code, the first four-digit is numbered from top/north to bottom/south of chromosome, the last 0 is reserved for new locus).

Mitochondrial and chloroplast genes were retrieved from Genbank (accessions KC568456.1 and KC598086.1) and prefixed with "mt-" and "cp-" respectively.

Biomaterial Browser
The following browser provides a list of biomaterials associated with this organism.
Biomaterial NameOrganismBiomaterial ProviderTreatment
Ndep_12h_3Nannochloropsis oceanica (N. oceanica IMET1)Ruhr University BochumNdep_12h
Ndep_240h_4Nannochloropsis oceanica (N. oceanica IMET1)Ruhr University BochumNdep_240h
Ndep_240h_6Nannochloropsis oceanica (N. oceanica IMET1)Ruhr University BochumNdep_240h
Ndep_240h_7Nannochloropsis oceanica (N. oceanica IMET1)Ruhr University BochumNdep_240h
Ndep_24h_1Nannochloropsis oceanica (N. oceanica IMET1)Ruhr University BochumNdep_24h
Ndep_24h_2Nannochloropsis oceanica (N. oceanica IMET1)Ruhr University BochumNdep_24h
Ndep_24h_3Nannochloropsis oceanica (N. oceanica IMET1)Ruhr University BochumNdep_24h
Ndep_3h_1Nannochloropsis oceanica (N. oceanica IMET1)Ruhr University BochumNdep_3h
Ndep_3h_2Nannochloropsis oceanica (N. oceanica IMET1)Ruhr University BochumNdep_3h
Ndep_3h_3Nannochloropsis oceanica (N. oceanica IMET1)Ruhr University BochumNdep_3h
GO Analysis Reports
Any analysis with GO results related to this organism are available for viewing. For further information, see the analysis information page.
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Term Information
Feature Summary
The following features are currently present for this organism
Feature TypeCount
CDS50,403
polypeptide12,602
mRNA12,442
gene10,493
syntenic_region409
exon61
tRNA53
genome30
rRNA8
region2
mitochondrial_chromosome1
chloroplast_chromosome1
Stocks
This organism is associated with 78 stock(s):
NameType
NoDGAT2C knockdowngene_RNAi_knockdown
NoDGAT2C overexpressiongene_overexpression
NoDGAT2C overexpressiongene_overexpression
NoDGAT2D knockdowngene_RNAi_knockdown
NoDGAT2D knockdowngene_RNAi_knockdown
NoDGAT2D overexpressiongene_overexpression
NoDGAT2D overexpressiongene_overexpression
NoDGAT2J knockdowngene_RNAi_knockdown
NoDGAT2J knockdowngene_RNAi_knockdown
NoDGAT2J overexpressiongene_overexpression
NoDGAT2J overexpressiongene_overexpression
NoDGAT2J subcellular localizationgene_subcellular_localization
NoDGAT2J subcellular localizationgene_subcellular_localization
NoDGAT2K knockdowngene_RNAi_knockdown
NoDGAT2K knockdowngene_RNAi_knockdown
NoDGAT2K overexpressiongene_overexpression
NoDGAT2K overexpressiongene_overexpression
NoDGAT2K subcellular localizationgene_subcellular_localization
NoDGAT2K subcellular localizationgene_subcellular_localization
PFfh-g-g4625 knockoutCRISPR_gene_knockout
PFtsY-g1732 knockdowngene_RNAi_knockdown
phosphatidic acid phosphatase knockoutCRISPR_gene_knockout
RLRP-g4928 knockoutCRISPR_gene_knockout
SDPR-g876 knockdowngene_RNAi_knockdown
SRP9-g7585 knockdowngene_RNAi_knockdown

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