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Properties
| Property Name | Value |
|---|
| TranscriptId | 529465 |
| Track | FilteredModels2 |
| ProteinId | 529379 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_13 | supercontig | scaffold_13:307641..309245 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5384 ID=mRNA_5384|Name=jgi.p|Nanoce1779_2|529379|organism=Nannochloropsis oceanica|type=mRNA|length=984bp
ATGGAGCCCGGCAGTGAACGACCTTTGGAAAATCCAGCGCAGGATGGTAT
CTCCTCCTTGGCCTTCTCCCCCAGCAGCTCCAACCTCTTGCTCATTTCCT
CTTGGGACAAGACCGCCCGCTTATACGACGCGACATCCAATATCGCCAAG
GGCATTTGGAGGAACCATGCTGCCGTCTTGGACTGTGCCGTGCAAGACGA
TCATACAGGCTTTTCTGGGGGGCTTGACCGGGCGGTGCGCATGATTTACT
TAAACCGTCCCGAGGACCCTGGTTTGAACATTGGGAGCCACGCGAAGCCC
GTGAGCTGCATGGAGTTTTCGAGGGAGTTGGGTGCCTTGGTCACGGGTGG
ATGGGACGGCCATGTGCACGTTTGGGATCCACGCACACAAGGAGAGGCAC
GAAGCTTACCGACATCGGAAAAAGTCTTTACATTGGCAGTGTCGGGTAAC
CGCATTGTGGTCGGCACTTCAGACCGTTCCGTCCTCATTTACGACGTAAG
GTACCTGAACGACCCAGAGGACCGGCGGGAGTCCTCCCTGAAACACCAAA
CCCGATGCATCCGTATATCCCCCGATAACAGCGGCTACGTCCTTGCCTCC
GTAGAAGGCCGCGTGGCAGTCGAGTATTTTGACCCCTCCCCGGCTGTCCA
AGCTAAGCGATATGCCTTCAAATGCCACCGACAGGGCGACCTCGTATTCC
CCGTCAATGCTGTGGCCTTCCATCCCACTCACGGCACATTCGCTACGGGT
GGTTGTGACGGGATGGTGTATACATGGGACGGACAGAACAAGAAGAGGCT
GGCACAACTGGGGCCTTACAAGACGAGCATTGCTGCGCTTGCGTACAACT
TTGATGGGTCACTTTTGGCCTTGGCTGCGTCATACACCTATGAGGAGGGC
GAGAAAGAGCATCCCATCGATGCGGTGTATTTGCGTTGCCCACTTGAGGG
TGAGGTCAGGCGCAAGGTCAAGGCCGCAGGGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|529379 >mRNA_5384-protein ID=mRNA_5384-protein|Name=jgi.p|Nanoce1779_2|529379|organism=Nannochloropsis oceanica|type=polypeptide|length=328bp
MEPGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAK
GIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKP
VSCMEFSRELGALVTGGWDGHVHVWDPRTQGEARSLPTSEKVFTLAVSGN
RIVVGTSDRSVLIYDVRYLNDPEDRRESSLKHQTRCIRISPDNSGYVLAS
VEGRVAVEYFDPSPAVQAKRYAFKCHRQGDLVFPVNAVAFHPTHGTFATG
GCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEG
EKEHPIDAVYLRCPLEGEVRRKVKAAG* back to topmRNA from alignment at scaffold_13:307641..309245+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5384 ID=mRNA_5384|Name=jgi.p|Nanoce1779_2|529379|organism=Nannochloropsis oceanica|type=mRNA|length=1605bp|location=Sequence derived from alignment at scaffold_13:307641..309245+ (Nannochloropsis oceanica)
ATGGAGCCCGGCAGTGAACGACCTTTGGAAAATCCAGCGCAGGATGGTAT
CTCCTCCTTGGCCTTCTCCCCCAGCAGCTCCAACCTCTTGCTCATTTCCT
CTTGGGACAAGACCGCCCGCTTATACGACGCGACATCCAATATCGCCAAG
GGCATTTGGAGGAACCATGCTGCCGTCTTGGACTGTGCCGTGCAAGACGA
TCATACAGGCTTTTCTGGGGGGCTTGACCGGGCGGTGCGCATGTACGTTT
GAAAGGGGGTGGAAGTTTTTGTTCTCTAGTCTAGTGTTCAGGGAAGACCC
TCTCGTCTCGCTTACTTACCCCTCACATTACTCTCCCCTCGGACGACTCA
GGATTTACTTAAACCGTCCCGAGGACCCTGGTTTGAACATTGGGAGCCAC
GCGAAGCCCGTGAGCTGCATGGAGTTTTCGAGGGAGTTGGGTGCCTTGGT
CACGGGTGGATGGGACGGCCATGTGCACGTTTGGTAAGGAGAAGAAAGGA
GGAGCAAAAGAAGAAAGGGAGGAAAGATCAGTAAGATAGGAAGGTGATGG
AGTGTTTTGAAAATAGGGGCATATTAGTAACCGGTTACAGGCATGCGCTG
TAAGAGAAAGAAATACAGCTCCTCTCCTAACCCGTGCTCACAACACCCCT
CCCTGACAATTGGATATAAATAGGGATCCACGCACACAAGGAGAGGCACG
AAGCTTACCGACATCGGAAAAAGTCTTTACATTGGCAGTGTCGGGTAACC
GCATTGTGGTCGGCACTTCAGACCGTTCCGTCCTCATTTACGACGTAAGG
TACGTTTGGTTTTAATTTTTGTTGCAGGAAAGTAGGCGGTAAACGCGCGG
ACCAGCACTCAATATTAAATCAAATTGCTGGTTGTGGGCCATTTTCACTT
ACATGCACGAATATACAGAAAGCTGAACGACCCAGAGGACCGGCGGGAGT
CCTCCCTGAAACACCAAACCCGATGCATCCGTATATCCCCCGATAACAGC
GGTGAGTAGTTCTTGCTCGTCCTTGCCTGGTTGATCGCAACATCAGGCAT
GATTCATGGTCGCATCTATCTTATTTACTTTTGGGTGCGGTGTCATGCCG
TACAATCAGGAAAGACACCCACTCGACATTTTCATCCTGTCTTTCTGCCC
AAACATAATGTGTCCCTCATGCCATCTTCCCCGCACTCTTATTTACCGTG
TTAGGCTACGTCCTTGCCTCCGTAGAAGGCCGCGTGGCAGTCGAGTATTT
TGACCCCTCCCCGGCTGTCCAAGCTAAGCGATATGCCTTCAAATGCCACC
GACAGGGCGACCTCGTATTCCCCGTCAATGCTGTGGCCTTCCATCCCACT
CACGGCACATTCGCTACGGGTGGTTGTGACGGGATGGTGTATACATGGGA
CGGACAGAACAAGAAGAGGCTGGCACAACTGGGGCCTTACAAGACGAGCA
TTGCTGCGCTTGCGTACAACTTTGATGGGTCACTTTTGGCCTTGGCTGCG
TCATACACCTATGAGGAGGGCGAGAAAGAGCATCCCATCGATGCGGTGTA
TTTGCGTTGCCCACTTGAGGGTGAGGTCAGGCGCAAGGTCAAGGCCGCAG
GGTGA back to topCoding sequence (CDS) from alignment at scaffold_13:307641..309245+ >mRNA_5384 ID=mRNA_5384|Name=jgi.p|Nanoce1779_2|529379|organism=Nannochloropsis oceanica|type=CDS|length=4920bp|location=Sequence derived from alignment at scaffold_13:307641..309245+ (Nannochloropsis oceanica)
ATGGAGCCCGGCAGTGAACGACCTTTGGAAAATCCAGCGCAGGATGGTAT
CTCCTCCTTGGCCTTCTCCCCCAGCAGCTCCAACCTCTTGCTCATTTCCT
CTTGGGACAAGACCGCCCGCTTATACGACGCGACATCCAATATCGCCAAG
GGCATTTGGAGGAACCATGCTGCCGTCTTGGACTGTGCCGTGCAAGACGA
TCATACAGGCTTTTCTGGGGGGCTTGACCGGGCGGTGCGCATGATTTACT
TAAACCGTCCCGAGGACCCTGGTTTGAACATTGGGAGCCACGCGAAGCCC
GTGAGCTGCATGGAGTTTTCGAGGGAGTTGGGTGCCTTGGTCACGGGTGG
ATGGGACGGCCATGTGCACGTTTGGGATCCACGCACACAAGGAGAGGCAC
GAAGCTTACCGACATCGGAAAAAGTCTTTACATTGGCAGTGTCGGGTAAC
CGCATTGTGGTCGGCACTTCAGACCGTTCCGTCCTCATTTACGACGTAAG
GTACCTGAACGACCCAGAGGACCGGCGGGAGTCCTCCCTGAAACACCAAA
CCCGATGCATCCGTATATCCCCCGATAACAGCGGCTACGTCCTTGCCTCC
GTAGAAGGCCGCGTGGCAGTCGAGTATTTTGACCCCTCCCCGGCTGTCCA
AGCTAAGCGATATGCCTTCAAATGCCACCGACAGGGCGACCTCGTATTCC
CCGTCAATGCTGTGGCCTTCCATCCCACTCACGGCACATTCGCTACGGGT
GGTTGTGACGGGATGGTGTATACATGGGACGGACAGAACAAGAAGAGGCT
GGCACAACTGGGGCCTTACAAGACGAGCATTGCTGCGCTTGCGTACAACT
TTGATGGGTCACTTTTGGCCTTGGCTGCGTCATACACCTATGAGGAGGGC
GAGAAAGAGCATCCCATCGATGCGGTGTATTTGCGTTGCCCACTTGAGGG
TGAGGTCAGGCGCAAGGTCAAGGCCGCAGGGTGAATGGAGCCCGGCAGTG
AACGACCTTTGGAAAATCCAGCGCAGGATGGTATCTCCTCCTTGGCCTTC
TCCCCCAGCAGCTCCAACCTCTTGCTCATTTCCTCTTGGGACAAGACCGC
CCGCTTATACGACGCGACATCCAATATCGCCAAGGGCATTTGGAGGAACC
ATGCTGCCGTCTTGGACTGTGCCGTGCAAGACGATCATACAGGCTTTTCT
GGGGGGCTTGACCGGGCGGTGCGCATGATTTACTTAAACCGTCCCGAGGA
CCCTGGTTTGAACATTGGGAGCCACGCGAAGCCCGTGAGCTGCATGGAGT
TTTCGAGGGAGTTGGGTGCCTTGGTCACGGGTGGATGGGACGGCCATGTG
CACGTTTGGGATCCACGCACACAAGGAGAGGCACGAAGCTTACCGACATC
GGAAAAAGTCTTTACATTGGCAGTGTCGGGTAACCGCATTGTGGTCGGCA
CTTCAGACCGTTCCGTCCTCATTTACGACGTAAGGTACCTGAACGACCCA
GAGGACCGGCGGGAGTCCTCCCTGAAACACCAAACCCGATGCATCCGTAT
ATCCCCCGATAACAGCGGCTACGTCCTTGCCTCCGTAGAAGGCCGCGTGG
CAGTCGAGTATTTTGACCCCTCCCCGGCTGTCCAAGCTAAGCGATATGCC
TTCAAATGCCACCGACAGGGCGACCTCGTATTCCCCGTCAATGCTGTGGC
CTTCCATCCCACTCACGGCACATTCGCTACGGGTGGTTGTGACGGGATGG
TGTATACATGGGACGGACAGAACAAGAAGAGGCTGGCACAACTGGGGCCT
TACAAGACGAGCATTGCTGCGCTTGCGTACAACTTTGATGGGTCACTTTT
GGCCTTGGCTGCGTCATACACCTATGAGGAGGGCGAGAAAGAGCATCCCA
TCGATGCGGTGTATTTGCGTTGCCCACTTGAGGGTGAGGTCAGGCGCAAG
GTCAAGGCCGCAGGGTGAATGGAGCCCGGCAGTGAACGACCTTTGGAAAA
TCCAGCGCAGGATGGTATCTCCTCCTTGGCCTTCTCCCCCAGCAGCTCCA
ACCTCTTGCTCATTTCCTCTTGGGACAAGACCGCCCGCTTATACGACGCG
ACATCCAATATCGCCAAGGGCATTTGGAGGAACCATGCTGCCGTCTTGGA
CTGTGCCGTGCAAGACGATCATACAGGCTTTTCTGGGGGGCTTGACCGGG
CGGTGCGCATGATTTACTTAAACCGTCCCGAGGACCCTGGTTTGAACATT
GGGAGCCACGCGAAGCCCGTGAGCTGCATGGAGTTTTCGAGGGAGTTGGG
TGCCTTGGTCACGGGTGGATGGGACGGCCATGTGCACGTTTGGGATCCAC
GCACACAAGGAGAGGCACGAAGCTTACCGACATCGGAAAAAGTCTTTACA
TTGGCAGTGTCGGGTAACCGCATTGTGGTCGGCACTTCAGACCGTTCCGT
CCTCATTTACGACGTAAGGTACCTGAACGACCCAGAGGACCGGCGGGAGT
CCTCCCTGAAACACCAAACCCGATGCATCCGTATATCCCCCGATAACAGC
GGCTACGTCCTTGCCTCCGTAGAAGGCCGCGTGGCAGTCGAGTATTTTGA
CCCCTCCCCGGCTGTCCAAGCTAAGCGATATGCCTTCAAATGCCACCGAC
AGGGCGACCTCGTATTCCCCGTCAATGCTGTGGCCTTCCATCCCACTCAC
GGCACATTCGCTACGGGTGGTTGTGACGGGATGGTGTATACATGGGACGG
ACAGAACAAGAAGAGGCTGGCACAACTGGGGCCTTACAAGACGAGCATTG
CTGCGCTTGCGTACAACTTTGATGGGTCACTTTTGGCCTTGGCTGCGTCA
TACACCTATGAGGAGGGCGAGAAAGAGCATCCCATCGATGCGGTGTATTT
GCGTTGCCCACTTGAGGGTGAGGTCAGGCGCAAGGTCAAGGCCGCAGGGT
GAATGGAGCCCGGCAGTGAACGACCTTTGGAAAATCCAGCGCAGGATGGT
ATCTCCTCCTTGGCCTTCTCCCCCAGCAGCTCCAACCTCTTGCTCATTTC
CTCTTGGGACAAGACCGCCCGCTTATACGACGCGACATCCAATATCGCCA
AGGGCATTTGGAGGAACCATGCTGCCGTCTTGGACTGTGCCGTGCAAGAC
GATCATACAGGCTTTTCTGGGGGGCTTGACCGGGCGGTGCGCATGATTTA
CTTAAACCGTCCCGAGGACCCTGGTTTGAACATTGGGAGCCACGCGAAGC
CCGTGAGCTGCATGGAGTTTTCGAGGGAGTTGGGTGCCTTGGTCACGGGT
GGATGGGACGGCCATGTGCACGTTTGGGATCCACGCACACAAGGAGAGGC
ACGAAGCTTACCGACATCGGAAAAAGTCTTTACATTGGCAGTGTCGGGTA
ACCGCATTGTGGTCGGCACTTCAGACCGTTCCGTCCTCATTTACGACGTA
AGGTACCTGAACGACCCAGAGGACCGGCGGGAGTCCTCCCTGAAACACCA
AACCCGATGCATCCGTATATCCCCCGATAACAGCGGCTACGTCCTTGCCT
CCGTAGAAGGCCGCGTGGCAGTCGAGTATTTTGACCCCTCCCCGGCTGTC
CAAGCTAAGCGATATGCCTTCAAATGCCACCGACAGGGCGACCTCGTATT
CCCCGTCAATGCTGTGGCCTTCCATCCCACTCACGGCACATTCGCTACGG
GTGGTTGTGACGGGATGGTGTATACATGGGACGGACAGAACAAGAAGAGG
CTGGCACAACTGGGGCCTTACAAGACGAGCATTGCTGCGCTTGCGTACAA
CTTTGATGGGTCACTTTTGGCCTTGGCTGCGTCATACACCTATGAGGAGG
GCGAGAAAGAGCATCCCATCGATGCGGTGTATTTGCGTTGCCCACTTGAG
GGTGAGGTCAGGCGCAAGGTCAAGGCCGCAGGGTGAATGGAGCCCGGCAG
TGAACGACCTTTGGAAAATCCAGCGCAGGATGGTATCTCCTCCTTGGCCT
TCTCCCCCAGCAGCTCCAACCTCTTGCTCATTTCCTCTTGGGACAAGACC
GCCCGCTTATACGACGCGACATCCAATATCGCCAAGGGCATTTGGAGGAA
CCATGCTGCCGTCTTGGACTGTGCCGTGCAAGACGATCATACAGGCTTTT
CTGGGGGGCTTGACCGGGCGGTGCGCATGATTTACTTAAACCGTCCCGAG
GACCCTGGTTTGAACATTGGGAGCCACGCGAAGCCCGTGAGCTGCATGGA
GTTTTCGAGGGAGTTGGGTGCCTTGGTCACGGGTGGATGGGACGGCCATG
TGCACGTTTGGGATCCACGCACACAAGGAGAGGCACGAAGCTTACCGACA
TCGGAAAAAGTCTTTACATTGGCAGTGTCGGGTAACCGCATTGTGGTCGG
CACTTCAGACCGTTCCGTCCTCATTTACGACGTAAGGTACCTGAACGACC
CAGAGGACCGGCGGGAGTCCTCCCTGAAACACCAAACCCGATGCATCCGT
ATATCCCCCGATAACAGCGGCTACGTCCTTGCCTCCGTAGAAGGCCGCGT
GGCAGTCGAGTATTTTGACCCCTCCCCGGCTGTCCAAGCTAAGCGATATG
CCTTCAAATGCCACCGACAGGGCGACCTCGTATTCCCCGTCAATGCTGTG
GCCTTCCATCCCACTCACGGCACATTCGCTACGGGTGGTTGTGACGGGAT
GGTGTATACATGGGACGGACAGAACAAGAAGAGGCTGGCACAACTGGGGC
CTTACAAGACGAGCATTGCTGCGCTTGCGTACAACTTTGATGGGTCACTT
TTGGCCTTGGCTGCGTCATACACCTATGAGGAGGGCGAGAAAGAGCATCC
CATCGATGCGGTGTATTTGCGTTGCCCACTTGAGGGTGAGGTCAGGCGCA
AGGTCAAGGCCGCAGGGTGA back to top
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