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Properties
| Property Name | Value |
|---|
| TranscriptId | 604594 |
| Track | FilteredModels2 |
| ProteinId | 604508 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_29 | supercontig | scaffold_29:214490..216072 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8923 ID=mRNA_8923|Name=jgi.p|Nanoce1779_2|604508|organism=Nannochloropsis oceanica|type=mRNA|length=1583bp
CCTTCGGGATGATGAGTGACGGCGAGATTGCCGACAACATCAAAGAGGAG
GAAGAGGAGGACAAGGACGGAACCGGGGGCTTCGGTGGGCGTGCGGAGAA
TGGAACACGCTTGCGCTTGCCGCTCGCTCCTGCCCCTGCTTCTTTACTCT
TTTCTACCATCCCTCCCACCTGCTCCGCTTCGCCGACTGCTGTCGCTGCT
GAAGCCGCTGCTGCTGCCGCTGCTCTCTGCTCTTCCTTTTTCCGCTTCCC
TTCGATTGTCACTAACGACCATCGGATCTTAGAACCCTTGAACATCAAGC
GAGTGGTAAATTCACCCGCCTTCCGGTTTCCAGAGCTCGACCAAGATACG
AGTCCTCTCCCATTTCCCTTCTCCCCTTCTTCCCATTCCATCGGCGGTGC
CCCGGGATTAGGATTTCCACCCGTGAGGGTCAAAATCATTCCCTTAGGCA
AGACGCTTCGACCATCAAACACGACTTCCACCACATCTGCTCCCTCCAAC
ACGACCTCACCTCCTTCCGCTTTCCCATCAGGAGTATGGGCCAAGAGAGA
GGCGCTGATGGGGTGCACGGACTCCACAACATCTGAGCTAGCCGTAGAAT
CCAACCATGCCCGAAGCGTTGCCTGACAAAACGGAGCCACCACTCCCTTC
CTCCCTCCCTTTTTTATGTCCTCCCCTGCAGCAGGCGGTGCAAAACTACT
GCTCGTGCTACCACTGATACTTCTGCCATCACTCGGCACCCTTCCCGCCT
TTACACCTGTCCAGAAGAATTCTACAAGCCCAACCAGGTCTTGCATTGAC
TCTCCCTCTGTCCCTCGCTCGCCCTTGGCTGCCCGCCGTAGTTCACTCAA
AACACAAGCCATCAGCTTTGCTGGTGTCGCCACTCCCTCCATTCCTCTTG
CTTGCAACAAACCTCCCAGCGCGGACAAAGGGAGGATAGTCGGGGAGGAG
GGCGGGAGGGAGGACAAGGAAGGGGAGAGGAAACCAGAGACAGAGCGTTC
GATGGCGAGACGAAGGGGAGACACCCAGTTGATGGTGGCAACGAGCTCTA
CAATTTGCTGGAGGTCACGGGGGAGGAAGAGGCGGGTAGAACTAGCAGGA
GTGGTGGCTGTGGTGGTAGAAGAGGGAGGAGAGGAGGAGAGAAGCCGCTC
TCTACAGACGCGAAAGAGCCCGGGTGCGACTTTTCCGAGGGCCTGGATGC
TGCTGGGGATGATGGAGAGGGAGGAGAGTGACATCAGGGGGAGCTCTCCT
TCTGGGTCTTGGCCGTCGTAGGAAGACGACATGAGCAGCGCCCGGCGTGC
GCGGAGAAGGCGGGTCAGGAGGGACGCGGCAGGAGTACGCGCTTGGTCGG
TGCAATGGGAGGCGTCGACGATGCAAGTCAATAATGCCTCGTACGTTCGC
CCGGACAGGATCCCGCCGGCGGTCAGCTCCCAGGATGCACACGTTTCGAG
GAAACAATCTAAGACCCACAGAGCCCATTCAATGCTCGGCTGCCCGTGAG
CTTCAATCTCTGAAGTCCACGCTTGTGGGAGGGAGGTTCCTGGGAGGGAG
CTGAGAAGGGCGTACCCTTTGGGAGGGGGAAGA back to topprotein sequence of jgi.p|Nanoce1779_2|604508 >mRNA_8923-protein ID=mRNA_8923-protein|Name=jgi.p|Nanoce1779_2|604508|organism=Nannochloropsis oceanica|type=polypeptide|length=206bp
MMSDGEIADNIKEEEEEDKDGTGGFGGRAENGTRLRLPLAPAPASLLFST
IPPTCSASPTAVAAEAAAAAAALCSSFFRFPSIVTNDHRILEPLNIKRVV
NSPAFRFPELDQDTSPLPFPFSPSSHSIGGAPGLGFPPVRVKIIPLGKTL
RPSNTTSTTSAPSNTTSPPSAFPSGVWAKREALMGCTDSTTSELAVESNH
ARSVA* back to topmRNA from alignment at scaffold_29:214490..216072+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8923 ID=mRNA_8923|Name=jgi.p|Nanoce1779_2|604508|organism=Nannochloropsis oceanica|type=mRNA|length=1583bp|location=Sequence derived from alignment at scaffold_29:214490..216072+ (Nannochloropsis oceanica)
CCTTCGGGATGATGAGTGACGGCGAGATTGCCGACAACATCAAAGAGGAG
GAAGAGGAGGACAAGGACGGAACCGGGGGCTTCGGTGGGCGTGCGGAGAA
TGGAACACGCTTGCGCTTGCCGCTCGCTCCTGCCCCTGCTTCTTTACTCT
TTTCTACCATCCCTCCCACCTGCTCCGCTTCGCCGACTGCTGTCGCTGCT
GAAGCCGCTGCTGCTGCCGCTGCTCTCTGCTCTTCCTTTTTCCGCTTCCC
TTCGATTGTCACTAACGACCATCGGATCTTAGAACCCTTGAACATCAAGC
GAGTGGTAAATTCACCCGCCTTCCGGTTTCCAGAGCTCGACCAAGATACG
AGTCCTCTCCCATTTCCCTTCTCCCCTTCTTCCCATTCCATCGGCGGTGC
CCCGGGATTAGGATTTCCACCCGTGAGGGTCAAAATCATTCCCTTAGGCA
AGACGCTTCGACCATCAAACACGACTTCCACCACATCTGCTCCCTCCAAC
ACGACCTCACCTCCTTCCGCTTTCCCATCAGGAGTATGGGCCAAGAGAGA
GGCGCTGATGGGGTGCACGGACTCCACAACATCTGAGCTAGCCGTAGAAT
CCAACCATGCCCGAAGCGTTGCCTGACAAAACGGAGCCACCACTCCCTTC
CTCCCTCCCTTTTTTATGTCCTCCCCTGCAGCAGGCGGTGCAAAACTACT
GCTCGTGCTACCACTGATACTTCTGCCATCACTCGGCACCCTTCCCGCCT
TTACACCTGTCCAGAAGAATTCTACAAGCCCAACCAGGTCTTGCATTGAC
TCTCCCTCTGTCCCTCGCTCGCCCTTGGCTGCCCGCCGTAGTTCACTCAA
AACACAAGCCATCAGCTTTGCTGGTGTCGCCACTCCCTCCATTCCTCTTG
CTTGCAACAAACCTCCCAGCGCGGACAAAGGGAGGATAGTCGGGGAGGAG
GGCGGGAGGGAGGACAAGGAAGGGGAGAGGAAACCAGAGACAGAGCGTTC
GATGGCGAGACGAAGGGGAGACACCCAGTTGATGGTGGCAACGAGCTCTA
CAATTTGCTGGAGGTCACGGGGGAGGAAGAGGCGGGTAGAACTAGCAGGA
GTGGTGGCTGTGGTGGTAGAAGAGGGAGGAGAGGAGGAGAGAAGCCGCTC
TCTACAGACGCGAAAGAGCCCGGGTGCGACTTTTCCGAGGGCCTGGATGC
TGCTGGGGATGATGGAGAGGGAGGAGAGTGACATCAGGGGGAGCTCTCCT
TCTGGGTCTTGGCCGTCGTAGGAAGACGACATGAGCAGCGCCCGGCGTGC
GCGGAGAAGGCGGGTCAGGAGGGACGCGGCAGGAGTACGCGCTTGGTCGG
TGCAATGGGAGGCGTCGACGATGCAAGTCAATAATGCCTCGTACGTTCGC
CCGGACAGGATCCCGCCGGCGGTCAGCTCCCAGGATGCACACGTTTCGAG
GAAACAATCTAAGACCCACAGAGCCCATTCAATGCTCGGCTGCCCGTGAG
CTTCAATCTCTGAAGTCCACGCTTGTGGGAGGGAGGTTCCTGGGAGGGAG
CTGAGAAGGGCGTACCCTTTGGGAGGGGGAAGA back to topCoding sequence (CDS) from alignment at scaffold_29:214490..216072+ >mRNA_8923 ID=mRNA_8923|Name=jgi.p|Nanoce1779_2|604508|organism=Nannochloropsis oceanica|type=CDS|length=618bp|location=Sequence derived from alignment at scaffold_29:214490..216072+ (Nannochloropsis oceanica)
ATGATGAGTGACGGCGAGATTGCCGACAACATCAAAGAGGAGGAAGAGGA
GGACAAGGACGGAACCGGGGGCTTCGGTGGGCGTGCGGAGAATGGAACAC
GCTTGCGCTTGCCGCTCGCTCCTGCCCCTGCTTCTTTACTCTTTTCTACC
ATCCCTCCCACCTGCTCCGCTTCGCCGACTGCTGTCGCTGCTGAAGCCGC
TGCTGCTGCCGCTGCTCTCTGCTCTTCCTTTTTCCGCTTCCCTTCGATTG
TCACTAACGACCATCGGATCTTAGAACCCTTGAACATCAAGCGAGTGGTA
AATTCACCCGCCTTCCGGTTTCCAGAGCTCGACCAAGATACGAGTCCTCT
CCCATTTCCCTTCTCCCCTTCTTCCCATTCCATCGGCGGTGCCCCGGGAT
TAGGATTTCCACCCGTGAGGGTCAAAATCATTCCCTTAGGCAAGACGCTT
CGACCATCAAACACGACTTCCACCACATCTGCTCCCTCCAACACGACCTC
ACCTCCTTCCGCTTTCCCATCAGGAGTATGGGCCAAGAGAGAGGCGCTGA
TGGGGTGCACGGACTCCACAACATCTGAGCTAGCCGTAGAATCCAACCAT
GCCCGAAGCGTTGCCTGA back to top
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