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Properties
| Property Name | Value |
|---|
| TranscriptId | 622535 |
| Track | FilteredModels2 |
| ProteinId | 622449 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:333803..334765 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_127 ID=mRNA_127|Name=jgi.p|Nanoce1779_2|622449|organism=Nannochloropsis oceanica|type=mRNA|length=798bp
ATGTCTGCTGTCTCCTCCTCCGCCGTTTCATCGCTGTCCAAGAACCCCAT
TGTCATTTTCCCAGCCCAATTCGGTATTGCCAAAGACTATGAGGAAATGA
TTGCTGAGCTGAATTCTAGAGGGCACCCTGCCTACGCCGTAGACCTCAAG
CGGTTTGACTGGCTCAAGATCACCAAGTCTGCCGTCACTTCAGATTACTG
GAAAGGCACTCTCAAACCCACCGGTACTCTTGACTTTTACTTCGATGCCG
TCACCGCCACCATCGATCAAGTCAAGGCCGAGTTCCCCTCCCGTAAAATC
CATCTCGTCGCTCACTCCATCGGGGGATGGGTCGCGCGAGCATATGTAGG
TGAAGTCGCAGACCCCCAAGATGTCCAAAAACGTTTCGCGTCCCTTACTA
CACTAGGCTCGCCGAACTACCCCCCTCCATCTGGAGAAGGTTTTTTCAGT
AATTTGGATCAAACGCGGGGGTTGCTTGAATATGTTAATAGTAATTTCCC
TGGCTCGTTTCACAAGGGGATGAAGTACGTGTCGGTGGGGGGAATAGGGA
CCGAGGGAAGGCTCGGATGGGGATTGGAAGAGAACGTGGCTTTCATTAGT
TATTTGCCGTTGGGGGATGGGATCATCCCTGAGGAGATTGCTTTCTTGGA
AGGGGCGGTGAGGGTGGAGGTGGAAGCGAAGCACTCAGGCTTTATTCCGA
CGGTGGGACCGAGCATTAAGATTCCCGGATACGTGTGGTATGGCACACCA
GGGGTGTTGGAGCAGTGGTTGGTACACTTGCCGGAAAGGAGGAGATGA back to topprotein sequence of jgi.p|Nanoce1779_2|622449 >mRNA_127-protein ID=mRNA_127-protein|Name=jgi.p|Nanoce1779_2|622449|organism=Nannochloropsis oceanica|type=polypeptide|length=266bp
MSAVSSSAVSSLSKNPIVIFPAQFGIAKDYEEMIAELNSRGHPAYAVDLK
RFDWLKITKSAVTSDYWKGTLKPTGTLDFYFDAVTATIDQVKAEFPSRKI
HLVAHSIGGWVARAYVGEVADPQDVQKRFASLTTLGSPNYPPPSGEGFFS
NLDQTRGLLEYVNSNFPGSFHKGMKYVSVGGIGTEGRLGWGLEENVAFIS
YLPLGDGIIPEEIAFLEGAVRVEVEAKHSGFIPTVGPSIKIPGYVWYGTP
GVLEQWLVHLPERRR* back to topmRNA from alignment at scaffold_3:333803..334765+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_127 ID=mRNA_127|Name=jgi.p|Nanoce1779_2|622449|organism=Nannochloropsis oceanica|type=mRNA|length=963bp|location=Sequence derived from alignment at scaffold_3:333803..334765+ (Nannochloropsis oceanica)
ATGTCTGCTGTCTCCTCCTCCGCCGTTTCATCGCTGTCCAAGAACCCCAT
TGTCATTTTCCCAGCCCAATTCGGTATTGCCAAAGACTATGAGGAAATGA
TTGCTGAGCTGAATTCTAGAGGGCACCCTGCCTACGCCGTAGACCTCAAG
CGGTTTGACTGGCTCAAGATCACCAAGTCTGCCGTCACTTCAGGTGCGTG
CTTGAAATACGTTTGCTTTTGGATATGGGAGCATTATCTACTTTGATGTT
GGGACGCTCGAAGGGGTCATTTTCTAACTCTCCATCTCTCCCTCACGCGC
GCCCTCCCTTCTTCCCTTTCCCGCTCCCTCAAACAGATTACTGGAAAGGC
ACTCTCAAACCCACCGGTACTCTTGACTTTTACTTCGATGCCGTCACCGC
CACCATCGATCAAGTCAAGGCCGAGTTCCCCTCCCGTAAAATCCATCTCG
TCGCTCACTCCATCGGGGGATGGGTCGCGCGAGCATATGTAGGTGAAGTC
GCAGACCCCCAAGATGTCCAAAAACGTTTCGCGTCCCTTACTACACTAGG
CTCGCCGAACTACCCCCCTCCATCTGGAGAAGGTTTTTTCAGTAATTTGG
ATCAAACGCGGGGGTTGCTTGAATATGTTAATAGTAATTTCCCTGGCTCG
TTTCACAAGGGGATGAAGTACGTGTCGGTGGGGGGAATAGGGACCGAGGG
AAGGCTCGGATGGGGATTGGAAGAGAACGTGGCTTTCATTAGTTATTTGC
CGTTGTGTGGGAGGGGGGGGGGGGAGGGGGGATGGGATCATCCCTGAGGA
GATTGCTTTCTTGGAAGGGGCGGTGAGGGTGGAGGTGGAAGCGAAGCACT
CAGGCTTTATTCCGACGGTGGGACCGAGCATTAAGATTCCCGGATACGTG
TGGTATGGCACACCAGGGGTGTTGGAGCAGTGGTTGGTACACTTGCCGGA
AAGGAGGAGATGA back to topCoding sequence (CDS) from alignment at scaffold_3:333803..334765+ >mRNA_127 ID=mRNA_127|Name=jgi.p|Nanoce1779_2|622449|organism=Nannochloropsis oceanica|type=CDS|length=2394bp|location=Sequence derived from alignment at scaffold_3:333803..334765+ (Nannochloropsis oceanica)
ATGTCTGCTGTCTCCTCCTCCGCCGTTTCATCGCTGTCCAAGAACCCCAT
TGTCATTTTCCCAGCCCAATTCGGTATTGCCAAAGACTATGAGGAAATGA
TTGCTGAGCTGAATTCTAGAGGGCACCCTGCCTACGCCGTAGACCTCAAG
CGGTTTGACTGGCTCAAGATCACCAAGTCTGCCGTCACTTCAGATTACTG
GAAAGGCACTCTCAAACCCACCGGTACTCTTGACTTTTACTTCGATGCCG
TCACCGCCACCATCGATCAAGTCAAGGCCGAGTTCCCCTCCCGTAAAATC
CATCTCGTCGCTCACTCCATCGGGGGATGGGTCGCGCGAGCATATGTAGG
TGAAGTCGCAGACCCCCAAGATGTCCAAAAACGTTTCGCGTCCCTTACTA
CACTAGGCTCGCCGAACTACCCCCCTCCATCTGGAGAAGGTTTTTTCAGT
AATTTGGATCAAACGCGGGGGTTGCTTGAATATGTTAATAGTAATTTCCC
TGGCTCGTTTCACAAGGGGATGAAGTACGTGTCGGTGGGGGGAATAGGGA
CCGAGGGAAGGCTCGGATGGGGATTGGAAGAGAACGTGGCTTTCATTAGT
TATTTGCCGTTGGGGGATGGGATCATCCCTGAGGAGATTGCTTTCTTGGA
AGGGGCGGTGAGGGTGGAGGTGGAAGCGAAGCACTCAGGCTTTATTCCGA
CGGTGGGACCGAGCATTAAGATTCCCGGATACGTGTGGTATGGCACACCA
GGGGTGTTGGAGCAGTGGTTGGTACACTTGCCGGAAAGGAGGAGATGAAT
GTCTGCTGTCTCCTCCTCCGCCGTTTCATCGCTGTCCAAGAACCCCATTG
TCATTTTCCCAGCCCAATTCGGTATTGCCAAAGACTATGAGGAAATGATT
GCTGAGCTGAATTCTAGAGGGCACCCTGCCTACGCCGTAGACCTCAAGCG
GTTTGACTGGCTCAAGATCACCAAGTCTGCCGTCACTTCAGATTACTGGA
AAGGCACTCTCAAACCCACCGGTACTCTTGACTTTTACTTCGATGCCGTC
ACCGCCACCATCGATCAAGTCAAGGCCGAGTTCCCCTCCCGTAAAATCCA
TCTCGTCGCTCACTCCATCGGGGGATGGGTCGCGCGAGCATATGTAGGTG
AAGTCGCAGACCCCCAAGATGTCCAAAAACGTTTCGCGTCCCTTACTACA
CTAGGCTCGCCGAACTACCCCCCTCCATCTGGAGAAGGTTTTTTCAGTAA
TTTGGATCAAACGCGGGGGTTGCTTGAATATGTTAATAGTAATTTCCCTG
GCTCGTTTCACAAGGGGATGAAGTACGTGTCGGTGGGGGGAATAGGGACC
GAGGGAAGGCTCGGATGGGGATTGGAAGAGAACGTGGCTTTCATTAGTTA
TTTGCCGTTGGGGGATGGGATCATCCCTGAGGAGATTGCTTTCTTGGAAG
GGGCGGTGAGGGTGGAGGTGGAAGCGAAGCACTCAGGCTTTATTCCGACG
GTGGGACCGAGCATTAAGATTCCCGGATACGTGTGGTATGGCACACCAGG
GGTGTTGGAGCAGTGGTTGGTACACTTGCCGGAAAGGAGGAGATGAATGT
CTGCTGTCTCCTCCTCCGCCGTTTCATCGCTGTCCAAGAACCCCATTGTC
ATTTTCCCAGCCCAATTCGGTATTGCCAAAGACTATGAGGAAATGATTGC
TGAGCTGAATTCTAGAGGGCACCCTGCCTACGCCGTAGACCTCAAGCGGT
TTGACTGGCTCAAGATCACCAAGTCTGCCGTCACTTCAGATTACTGGAAA
GGCACTCTCAAACCCACCGGTACTCTTGACTTTTACTTCGATGCCGTCAC
CGCCACCATCGATCAAGTCAAGGCCGAGTTCCCCTCCCGTAAAATCCATC
TCGTCGCTCACTCCATCGGGGGATGGGTCGCGCGAGCATATGTAGGTGAA
GTCGCAGACCCCCAAGATGTCCAAAAACGTTTCGCGTCCCTTACTACACT
AGGCTCGCCGAACTACCCCCCTCCATCTGGAGAAGGTTTTTTCAGTAATT
TGGATCAAACGCGGGGGTTGCTTGAATATGTTAATAGTAATTTCCCTGGC
TCGTTTCACAAGGGGATGAAGTACGTGTCGGTGGGGGGAATAGGGACCGA
GGGAAGGCTCGGATGGGGATTGGAAGAGAACGTGGCTTTCATTAGTTATT
TGCCGTTGGGGGATGGGATCATCCCTGAGGAGATTGCTTTCTTGGAAGGG
GCGGTGAGGGTGGAGGTGGAAGCGAAGCACTCAGGCTTTATTCCGACGGT
GGGACCGAGCATTAAGATTCCCGGATACGTGTGGTATGGCACACCAGGGG
TGTTGGAGCAGTGGTTGGTACACTTGCCGGAAAGGAGGAGATGA back to top
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