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Properties
| Property Name | Value |
|---|
| TranscriptId | 642787 |
| Track | FilteredModels2 |
| ProteinId | 642701 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_38 | supercontig | scaffold_38:207551..209479 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9716 ID=mRNA_9716|Name=jgi.p|Nanoce1779_2|642701|organism=Nannochloropsis oceanica|type=mRNA|length=864bp
ATGCCCCCAAAAGGCAAGAAGGCCGATGCCAAGAAGGCGGAGAGGCTGAT
CGAGGACAAGACTTTCGGCCTCAAAAACAAGAATAAGAGCAAAAAGGTCC
AGCAGTACGTGGCGCACGTGACGACCCAGACAAAGCACAACGTCGGGATA
AAGACCGAGGCAGAAAAAGCGGCGGCTCTCAAGGCGAAGAAGGAGGCCAA
GGAGAAGGAGGATGTTGAGCTCAAGCTTCTCTTCATGCAGATGCAAGCAG
GAGCGGGGAAGACGAGCAAAGCAATGGAGGCAGCGGCCGAGGCGGCGAAA
GCTAAGAGAGACGCGGCCATGGCGGCCAAGGGCGGAAAGGGGGAGGCACA
ATGGATTGAGATTGACATGACGGGGAAGCCGCTGGAGGAGGTCATCGAGT
ACGAGCGTCAAAAATTGACATTTTTTAAGAAGAATGTGACCCCTGTCACG
GAGGCGTCGTTCGCGCAATGGAAGAAGGACAAGGCCGAGAGAGAGGAAGA
GGGAGACGCGGAGAGGGTCAAGGCGGAGATGGCCAAGAAGACCAAAGGCA
AGGGTCTGAGCGTACTGAGTGGAAAAGCGCTTTTCGAGTACGACGCGACC
CTGTTTGTCGACGACGAGGAAGCGGGAGAGGAGCAGGTGGATGTGAAGAA
CTTGAAATCGTTGATGGAGGAGGAGGACGAGGAGAGGGAGAGGGGGGGAG
GGGGCGAGGAGGAAGGGGAGGGGCTTGCGGTGGCGGTACAGGAGAATTTG
TACTTGGAGGAGGAGGATGATCTTGACGACCTAGACGATGACGATGATGA
GGAGGAGGAAGCTGAGAGGCAGGATGGGGGGAGTGCTGGGGAAGGAGGGG
GGAAGAGGGGTTGA back to topprotein sequence of jgi.p|Nanoce1779_2|642701 >mRNA_9716-protein ID=mRNA_9716-protein|Name=jgi.p|Nanoce1779_2|642701|organism=Nannochloropsis oceanica|type=polypeptide|length=288bp
MPPKGKKADAKKAERLIEDKTFGLKNKNKSKKVQQYVAHVTTQTKHNVGI
KTEAEKAAALKAKKEAKEKEDVELKLLFMQMQAGAGKTSKAMEAAAEAAK
AKRDAAMAAKGGKGEAQWIEIDMTGKPLEEVIEYERQKLTFFKKNVTPVT
EASFAQWKKDKAEREEEGDAERVKAEMAKKTKGKGLSVLSGKALFEYDAT
LFVDDEEAGEEQVDVKNLKSLMEEEDEERERGGGGEEEGEGLAVAVQENL
YLEEEDDLDDLDDDDDEEEEAERQDGGSAGEGGGKRG* back to topmRNA from alignment at scaffold_38:207551..209479- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9716 ID=mRNA_9716|Name=jgi.p|Nanoce1779_2|642701|organism=Nannochloropsis oceanica|type=mRNA|length=1929bp|location=Sequence derived from alignment at scaffold_38:207551..209479- (Nannochloropsis oceanica)
ATGCCCCCAAAAGGCAAGAAGGCCGATGCCAAGAAGGCGGAGAGGCTGAT
CGAGGACAAGACTTTCGGCCTCAAAAACAAGAATAAGAGCAAAAAGGTGC
GTTTGGGTGAGAAGAGGAAAGGGGGGAGAAGACGGAGAGATCGTCGGGAT
GGAACGGATGTAGGTAGGCATGCAACACGACTCACTTTCTGTCGCGAGCG
TTGGCATGGTGGCCATCGGACGTGGGTCCGCTTGAAGACAATCGATCGTT
CCACCGGAACTGACGCTCCCTCTCTCCTTCTTTCCCTTCATTTCTTCCTC
GGCCCGTCCCATCCATCCACAGGTCCAGCAGTACGTGGCGCACGTGACGA
CCCAGACAAAGCACAACGTCGGGATAAAGACCGAGGCAGAAAAAGCGGCG
GCTCTCAAGGCGAAGAAGGAGGCCAAGGAGAAGGAGGATGTTGAGCTCAA
GCTTCTCTTCATGCAGGTAAAGAAAGGAGGGAGGGAGGGAGGGAGGGAAT
TTGGTTGGGGGGAAGGCGGGTCAGGCACTTCATTCATACAGACTCACTCG
TCTCTCCCTCCCGCCCTCCCTCCCTTCCTTCCTTCCTCATTTCCCCAGAT
GCAAGCAGGAGCGGGGAAGACGAGCAAAGCAATGGAGGCAGCGGCCGAGG
CGGCGAAAGCTAAGAGAGACGCGGCCATGGCGGCCAAGGGCGGAAAGGGG
GAGGCACAATGGATTGAGATTGACATGACGGGGAAGCCGCTGGAGGAGGT
AGGTAGGTAGGGAGGGAGGGAGGGAGAGAGAGAAGGAGGGAGAGAGGAAG
AGACGCAGTCGATTGAGATGGGCATGTTAAAATGAATCTCTGGAGGGGGG
AGGGAGAGAGGGACAGAGAGGGACGGAGAGATACCTACGTGCTTCATTCC
CTCTGTTGATGGCCGATTACTATTATTTTCCAACACTCTCTGCCATCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCTCTCTTTCTCTCCCTCCCTCCCTCC
CTCCCTAGGTCATCGAGTACGAGCGTCAAAAATTGACATTTTTTAAGAAG
AATGTGACCCCTGTCACGGTACGTCGCAGGAGGAGGAGGGAGGGGGAGGG
AGGAGGAAGGGAGGGAGGGAGGGGGGAAGGGGAGGTGTGTGTGTGGCGTG
GCGTGAGAATTTACGGACCCGCTTACCCGTACTCTCTTCCTTTGATTATT
CCCCGTCGTCATCTTATCATCTATAGGAGGCGTCGTTCGCGCAATGGAAG
AAGGACAAGGCCGAGAGAGAGGAAGAGGGAGACGCGGAGAGGGTGAGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGGAGGGAGGGA
GGGAGGGAGGGAGAGAGGTAGTAGGGAGGGAGGAAAAGAGATGCCGGGCC
AGTCATGCCGTTGCTTTTGTCCAGGGGATCGGAGGGAGCGCAAAGCTTTA
TACACGTCAACGGAAGCCCCTGTGTAGACACTCACCTTCTCCTCCCTCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCGCCCGGACCAGGTCAAGGCGGAGATGGCCA
AGAAGACCAAAGGCAAGGGTCTGAGCGTACTGAGTGGAAAAGCGCTTTTC
GAGTACGACGCGACCCTGTTTGTCGACGACGAGGAAGCGGGAGAGGAGCA
GGTGGATGTGAAGAACTTGAAATCGTTGATGGAGGAGGAGGACGAGGAGA
GGGAGAGGGGGGGAGGGGGCGAGGAGGAAGGGGAGGGGCTTGCGGTGGCG
GTACAGGAGAATTTGTACTTGGAGGAGGAGGATGATCTTGACGACCTAGA
CGATGACGATGATGAGGAGGAGGAAGCTGAGAGGCAGGATGGGGGGAGTG
CTGGGGAAGGAGGGGGGAAGAGGGGTTGA back to topCoding sequence (CDS) from alignment at scaffold_38:207551..209479- >mRNA_9716 ID=mRNA_9716|Name=jgi.p|Nanoce1779_2|642701|organism=Nannochloropsis oceanica|type=CDS|length=5184bp|location=Sequence derived from alignment at scaffold_38:207551..209479- (Nannochloropsis oceanica)
GTCAAGGCGGAGATGGCCAAGAAGACCAAAGGCAAGGGTCTGAGCGTACT
GAGTGGAAAAGCGCTTTTCGAGTACGACGCGACCCTGTTTGTCGACGACG
AGGAAGCGGGAGAGGAGCAGGTGGATGTGAAGAACTTGAAATCGTTGATG
GAGGAGGAGGACGAGGAGAGGGAGAGGGGGGGAGGGGGCGAGGAGGAAGG
GGAGGGGCTTGCGGTGGCGGTACAGGAGAATTTGTACTTGGAGGAGGAGG
ATGATCTTGACGACCTAGACGATGACGATGATGAGGAGGAGGAAGCTGAG
AGGCAGGATGGGGGGAGTGCTGGGGAAGGAGGGGGGAAGAGGGGTTGAGA
GGCGTCGTTCGCGCAATGGAAGAAGGACAAGGCCGAGAGAGAGGAAGAGG
GAGACGCGGAGAGGGTCATCGAGTACGAGCGTCAAAAATTGACATTTTTT
AAGAAGAATGTGACCCCTGTCACGATGCAAGCAGGAGCGGGGAAGACGAG
CAAAGCAATGGAGGCAGCGGCCGAGGCGGCGAAAGCTAAGAGAGACGCGG
CCATGGCGGCCAAGGGCGGAAAGGGGGAGGCACAATGGATTGAGATTGAC
ATGACGGGGAAGCCGCTGGAGGAGGTCCAGCAGTACGTGGCGCACGTGAC
GACCCAGACAAAGCACAACGTCGGGATAAAGACCGAGGCAGAAAAAGCGG
CGGCTCTCAAGGCGAAGAAGGAGGCCAAGGAGAAGGAGGATGTTGAGCTC
AAGCTTCTCTTCATGCAGATGCCCCCAAAAGGCAAGAAGGCCGATGCCAA
GAAGGCGGAGAGGCTGATCGAGGACAAGACTTTCGGCCTCAAAAACAAGA
ATAAGAGCAAAAAGGTCAAGGCGGAGATGGCCAAGAAGACCAAAGGCAAG
GGTCTGAGCGTACTGAGTGGAAAAGCGCTTTTCGAGTACGACGCGACCCT
GTTTGTCGACGACGAGGAAGCGGGAGAGGAGCAGGTGGATGTGAAGAACT
TGAAATCGTTGATGGAGGAGGAGGACGAGGAGAGGGAGAGGGGGGGAGGG
GGCGAGGAGGAAGGGGAGGGGCTTGCGGTGGCGGTACAGGAGAATTTGTA
CTTGGAGGAGGAGGATGATCTTGACGACCTAGACGATGACGATGATGAGG
AGGAGGAAGCTGAGAGGCAGGATGGGGGGAGTGCTGGGGAAGGAGGGGGG
AAGAGGGGTTGAGAGGCGTCGTTCGCGCAATGGAAGAAGGACAAGGCCGA
GAGAGAGGAAGAGGGAGACGCGGAGAGGGTCATCGAGTACGAGCGTCAAA
AATTGACATTTTTTAAGAAGAATGTGACCCCTGTCACGATGCAAGCAGGA
GCGGGGAAGACGAGCAAAGCAATGGAGGCAGCGGCCGAGGCGGCGAAAGC
TAAGAGAGACGCGGCCATGGCGGCCAAGGGCGGAAAGGGGGAGGCACAAT
GGATTGAGATTGACATGACGGGGAAGCCGCTGGAGGAGGTCCAGCAGTAC
GTGGCGCACGTGACGACCCAGACAAAGCACAACGTCGGGATAAAGACCGA
GGCAGAAAAAGCGGCGGCTCTCAAGGCGAAGAAGGAGGCCAAGGAGAAGG
AGGATGTTGAGCTCAAGCTTCTCTTCATGCAGATGCCCCCAAAAGGCAAG
AAGGCCGATGCCAAGAAGGCGGAGAGGCTGATCGAGGACAAGACTTTCGG
CCTCAAAAACAAGAATAAGAGCAAAAAGGTCAAGGCGGAGATGGCCAAGA
AGACCAAAGGCAAGGGTCTGAGCGTACTGAGTGGAAAAGCGCTTTTCGAG
TACGACGCGACCCTGTTTGTCGACGACGAGGAAGCGGGAGAGGAGCAGGT
GGATGTGAAGAACTTGAAATCGTTGATGGAGGAGGAGGACGAGGAGAGGG
AGAGGGGGGGAGGGGGCGAGGAGGAAGGGGAGGGGCTTGCGGTGGCGGTA
CAGGAGAATTTGTACTTGGAGGAGGAGGATGATCTTGACGACCTAGACGA
TGACGATGATGAGGAGGAGGAAGCTGAGAGGCAGGATGGGGGGAGTGCTG
GGGAAGGAGGGGGGAAGAGGGGTTGAGAGGCGTCGTTCGCGCAATGGAAG
AAGGACAAGGCCGAGAGAGAGGAAGAGGGAGACGCGGAGAGGGTCATCGA
GTACGAGCGTCAAAAATTGACATTTTTTAAGAAGAATGTGACCCCTGTCA
CGATGCAAGCAGGAGCGGGGAAGACGAGCAAAGCAATGGAGGCAGCGGCC
GAGGCGGCGAAAGCTAAGAGAGACGCGGCCATGGCGGCCAAGGGCGGAAA
GGGGGAGGCACAATGGATTGAGATTGACATGACGGGGAAGCCGCTGGAGG
AGGTCCAGCAGTACGTGGCGCACGTGACGACCCAGACAAAGCACAACGTC
GGGATAAAGACCGAGGCAGAAAAAGCGGCGGCTCTCAAGGCGAAGAAGGA
GGCCAAGGAGAAGGAGGATGTTGAGCTCAAGCTTCTCTTCATGCAGATGC
CCCCAAAAGGCAAGAAGGCCGATGCCAAGAAGGCGGAGAGGCTGATCGAG
GACAAGACTTTCGGCCTCAAAAACAAGAATAAGAGCAAAAAGGTCAAGGC
GGAGATGGCCAAGAAGACCAAAGGCAAGGGTCTGAGCGTACTGAGTGGAA
AAGCGCTTTTCGAGTACGACGCGACCCTGTTTGTCGACGACGAGGAAGCG
GGAGAGGAGCAGGTGGATGTGAAGAACTTGAAATCGTTGATGGAGGAGGA
GGACGAGGAGAGGGAGAGGGGGGGAGGGGGCGAGGAGGAAGGGGAGGGGC
TTGCGGTGGCGGTACAGGAGAATTTGTACTTGGAGGAGGAGGATGATCTT
GACGACCTAGACGATGACGATGATGAGGAGGAGGAAGCTGAGAGGCAGGA
TGGGGGGAGTGCTGGGGAAGGAGGGGGGAAGAGGGGTTGAGAGGCGTCGT
TCGCGCAATGGAAGAAGGACAAGGCCGAGAGAGAGGAAGAGGGAGACGCG
GAGAGGGTCATCGAGTACGAGCGTCAAAAATTGACATTTTTTAAGAAGAA
TGTGACCCCTGTCACGATGCAAGCAGGAGCGGGGAAGACGAGCAAAGCAA
TGGAGGCAGCGGCCGAGGCGGCGAAAGCTAAGAGAGACGCGGCCATGGCG
GCCAAGGGCGGAAAGGGGGAGGCACAATGGATTGAGATTGACATGACGGG
GAAGCCGCTGGAGGAGGTCCAGCAGTACGTGGCGCACGTGACGACCCAGA
CAAAGCACAACGTCGGGATAAAGACCGAGGCAGAAAAAGCGGCGGCTCTC
AAGGCGAAGAAGGAGGCCAAGGAGAAGGAGGATGTTGAGCTCAAGCTTCT
CTTCATGCAGATGCCCCCAAAAGGCAAGAAGGCCGATGCCAAGAAGGCGG
AGAGGCTGATCGAGGACAAGACTTTCGGCCTCAAAAACAAGAATAAGAGC
AAAAAGGTCAAGGCGGAGATGGCCAAGAAGACCAAAGGCAAGGGTCTGAG
CGTACTGAGTGGAAAAGCGCTTTTCGAGTACGACGCGACCCTGTTTGTCG
ACGACGAGGAAGCGGGAGAGGAGCAGGTGGATGTGAAGAACTTGAAATCG
TTGATGGAGGAGGAGGACGAGGAGAGGGAGAGGGGGGGAGGGGGCGAGGA
GGAAGGGGAGGGGCTTGCGGTGGCGGTACAGGAGAATTTGTACTTGGAGG
AGGAGGATGATCTTGACGACCTAGACGATGACGATGATGAGGAGGAGGAA
GCTGAGAGGCAGGATGGGGGGAGTGCTGGGGAAGGAGGGGGGAAGAGGGG
TTGAGAGGCGTCGTTCGCGCAATGGAAGAAGGACAAGGCCGAGAGAGAGG
AAGAGGGAGACGCGGAGAGGGTCATCGAGTACGAGCGTCAAAAATTGACA
TTTTTTAAGAAGAATGTGACCCCTGTCACGATGCAAGCAGGAGCGGGGAA
GACGAGCAAAGCAATGGAGGCAGCGGCCGAGGCGGCGAAAGCTAAGAGAG
ACGCGGCCATGGCGGCCAAGGGCGGAAAGGGGGAGGCACAATGGATTGAG
ATTGACATGACGGGGAAGCCGCTGGAGGAGGTCCAGCAGTACGTGGCGCA
CGTGACGACCCAGACAAAGCACAACGTCGGGATAAAGACCGAGGCAGAAA
AAGCGGCGGCTCTCAAGGCGAAGAAGGAGGCCAAGGAGAAGGAGGATGTT
GAGCTCAAGCTTCTCTTCATGCAGATGCCCCCAAAAGGCAAGAAGGCCGA
TGCCAAGAAGGCGGAGAGGCTGATCGAGGACAAGACTTTCGGCCTCAAAA
ACAAGAATAAGAGCAAAAAGGTCAAGGCGGAGATGGCCAAGAAGACCAAA
GGCAAGGGTCTGAGCGTACTGAGTGGAAAAGCGCTTTTCGAGTACGACGC
GACCCTGTTTGTCGACGACGAGGAAGCGGGAGAGGAGCAGGTGGATGTGA
AGAACTTGAAATCGTTGATGGAGGAGGAGGACGAGGAGAGGGAGAGGGGG
GGAGGGGGCGAGGAGGAAGGGGAGGGGCTTGCGGTGGCGGTACAGGAGAA
TTTGTACTTGGAGGAGGAGGATGATCTTGACGACCTAGACGATGACGATG
ATGAGGAGGAGGAAGCTGAGAGGCAGGATGGGGGGAGTGCTGGGGAAGGA
GGGGGGAAGAGGGGTTGAGAGGCGTCGTTCGCGCAATGGAAGAAGGACAA
GGCCGAGAGAGAGGAAGAGGGAGACGCGGAGAGGGTCATCGAGTACGAGC
GTCAAAAATTGACATTTTTTAAGAAGAATGTGACCCCTGTCACGATGCAA
GCAGGAGCGGGGAAGACGAGCAAAGCAATGGAGGCAGCGGCCGAGGCGGC
GAAAGCTAAGAGAGACGCGGCCATGGCGGCCAAGGGCGGAAAGGGGGAGG
CACAATGGATTGAGATTGACATGACGGGGAAGCCGCTGGAGGAGGTCCAG
CAGTACGTGGCGCACGTGACGACCCAGACAAAGCACAACGTCGGGATAAA
GACCGAGGCAGAAAAAGCGGCGGCTCTCAAGGCGAAGAAGGAGGCCAAGG
AGAAGGAGGATGTTGAGCTCAAGCTTCTCTTCATGCAGATGCCCCCAAAA
GGCAAGAAGGCCGATGCCAAGAAGGCGGAGAGGCTGATCGAGGACAAGAC
TTTCGGCCTCAAAAACAAGAATAAGAGCAAAAAG back to top
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