Properties
| Property Name | Value |
|---|
| TranscriptId | 578937 |
| Track | FilteredModels2 |
| ProteinId | 578851 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:638969..640467 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2047 ID=mRNA_2047|Name=jgi.p|Nanoce1779_2|578851|organism=Nannochloropsis oceanica|type=mRNA|length=1035bp
TGGGGGCTGGAACGGTGGGGGAAATGAGGAGGAAGGCAACGTACACTATG
GGGGTGGCTTGGGCATGCTTTGGGACAAGTACAACGAGGTTCTCGAATCC
AGCCCGTTGCCGACCAAGGCGGTCACGTCTCTGGTGGGCTTTACAATCGG
GGATCTGCTGGCTCAGAACTTCTTGGGGGAGAAGGGGGCGCCACTTGATG
TGAAGCGGTTGTTGCGATTGGCTTCTTTTGGGCTGGCGGTGCACGGGCCT
GTTGGTCACTTTTTTTATGGGGCTCTGGATGAGAAGCTCCCAAAGAAGGA
TGCGGCTACCGTGGCGATGAAGGTCTTGATTGACCAGGTGCTGTGGGCTC
CTATTTTCACTGTTATTTTCTTCGCGTGGATTGAGCTGTTGCAGGGGTCT
GGGTTGCAGAAGATTAAGGCAAAGATCAACCAGGATCTGGTGCGGGGTGT
GACAGCATCGTGGAAGGTCTGGCCTTTGGTGCACGTGATTAACTTCCGTT
TTATTCCTTCCCAGCAGCGATTGTTGTACATCAATACGATCCAGATTGGC
TACAACGTTTTCCTGTCCATGTTGGCCTCCCGCACGGGTTAATATCGAAA
CCTTTCCCTTCGCAGTGGCTGACGGCAGGGGTCTCTATAGCTTCCTTCTT
CCACACTTTATTAAGAATTTCGAGAATCTGCATTTTTTCTGGGCAATTCA
GTCGCAATGGGGAAGCGAGTGGTGAGCGATGCCACTCACGAGGTATTGGG
AGAGAGAAGAAGGAGAAATAGAAAAGATTACGCAAGAGAAAGAGAAAAAG
CATGAAGAACAAACGAAAAGTCTAAAAAAAATGGGGGGGTGCATGGGGAG
GGGTAATAAGGCGTAAGTAAAAACGTTATAGCCTTAAAAGAGATTCAGGT
TTTCGAGGTGAGTTTCGTGCTGGTACATTTCTCAGCCCTCACTCTCGCGC
AGTTAACTTCCTCACCCGCTTGTCCGGGGGGGTAGGGGGAATGGGAGGAA
AGAAAAGAAGCAAAGGCACAAAAAGGAGGTCAAAT back to topprotein sequence of jgi.p|Nanoce1779_2|578851 >mRNA_2047-protein ID=mRNA_2047-protein|Name=jgi.p|Nanoce1779_2|578851|organism=Nannochloropsis oceanica|type=polypeptide|length=176bp
MLWDKYNEVLESSPLPTKAVTSLVGFTIGDLLAQNFLGEKGAPLDVKRLL
RLASFGLAVHGPVGHFFYGALDEKLPKKDAATVAMKVLIDQVLWAPIFTV
IFFAWIELLQGSGLQKIKAKINQDLVRGVTASWKVWPLVHVINFRFIPSQ
QRLLYINTIQIGYNVFLSMLASRTG* back to topmRNA from alignment at scaffold_4:638969..640467+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2047 ID=mRNA_2047|Name=jgi.p|Nanoce1779_2|578851|organism=Nannochloropsis oceanica|type=mRNA|length=1499bp|location=Sequence derived from alignment at scaffold_4:638969..640467+ (Nannochloropsis oceanica)
TGGGGGCTGGAACGGTGGGGGAAATGAGGAGGAAGGCAACGTACACTATG
GGGGTGGCTTGGGCATGCTTTGGGACAAGTACAACGAGGTTCTCGAATCC
AGCCCGTTGCCGACCAAGGCGGTCACGTCTCTGGTGGGCTTTACAATCGG
GGATCTGCTGGCTCAGAACTTCTTGGGGGAGAAGGGGGCGCCACTTGATG
TGAAGCGGTTGTTGCGATTGGCTTCTTTTGGGCTGGCGGTGCACGGGCCT
GTTGGTCACTTTTTTTATGGGGCTCTGGATGAGAAGCTCCCAAAGAAGGA
TGCGGCTACCGTGGCGATGAAGGTCTTGATTGACCAGGTGCTGTGGGCTC
CTATTTTCACTGTTATTTTCTTCGCGTGGATTGAGCTGTTGCAGGGGTCT
GGGTTGCAGAAGATTAAGGCAAAGATCAACCAGGATCTGGTGCGGGGTGT
GACAGCATCGTGGAAGGTCTGGCCTTTGGTGCACGTGATTAACTTCCGTT
TTATTCCTTCCCAGCAGCGATTGTTGTACATCAATACGATCCAGGTGAGC
CTCTTTTTGGTGTTGTTTTGGTCCTGACTGGTTATGGCAAGACCAGTGTG
CGTTAAAAAAATAGGTAGACCAGAAACATTTTTCACTTTCTTCTCATTCT
CCTTCAATCCCCCTTCTCCTTTCAGATTGGCTACAACGTTTTCCTGTCCA
TGTTGGCCTCCCGCACGGGTACGTGTGAGGGGAGGGAGTGGAGGGAGGAA
GCGGGGATGTGCGAGAAATTAGAATGGAACCGTCGCGGTTTCGGGTGTGA
CGGATGCTTATGTGGAGCTCCTTTCTCACCTGCACCTGTGATATTTTGCT
TGCTGTGTCGCCGAGATGCTTCTGTCGCATGCAGAAGAAAGACAGCCCTT
TGTGTTCGTCTTTTCAATGGGCCTCATCTCATAATATACAGACGCATGGT
ATTCCTCCATACACTCGCGACGTTGTTGTCCCCAAAAAAACACATTTAGC
TTTCTTTTCTCATACTCTCGTTTTCGTCTCGCTTCATTCCAAATTACACA
GGTTAATATCGAAACCTTTCCCTTCGCAGTGGCTGACGGCAGGGGTCTCT
ATAGCTTCCTTCTTCCACACTTTATTAAGAATTTCGAGAATCTGCATTTT
TTCTGGGCAATTCAGTCGCAATGGGGAAGCGAGTGGTGAGCGATGCCACT
CACGAGGTATTGGGAGAGAGAAGAAGGAGAAATAGAAAAGATTACGCAAG
AGAAAGAGAAAAAGCATGAAGAACAAACGAAAAGTCTAAAAAAAATGGGG
GGGTGCATGGGGAGGGGTAATAAGGCGTAAGTAAAAACGTTATAGCCTTA
AAAGAGATTCAGGTTTTCGAGGTGAGTTTCGTGCTGGTACATTTCTCAGC
CCTCACTCTCGCGCAGTTAACTTCCTCACCCGCTTGTCCGGGGGGGTAGG
GGGAATGGGAGGAAAGAAAAGAAGCAAAGGCACAAAAAGGAGGTCAAAT back to topCoding sequence (CDS) from alignment at scaffold_4:638969..640467+ >mRNA_2047 ID=mRNA_2047|Name=jgi.p|Nanoce1779_2|578851|organism=Nannochloropsis oceanica|type=CDS|length=1584bp|location=Sequence derived from alignment at scaffold_4:638969..640467+ (Nannochloropsis oceanica)
ATGCTTTGGGACAAGTACAACGAGGTTCTCGAATCCAGCCCGTTGCCGAC
CAAGGCGGTCACGTCTCTGGTGGGCTTTACAATCGGGGATCTGCTGGCTC
AGAACTTCTTGGGGGAGAAGGGGGCGCCACTTGATGTGAAGCGGTTGTTG
CGATTGGCTTCTTTTGGGCTGGCGGTGCACGGGCCTGTTGGTCACTTTTT
TTATGGGGCTCTGGATGAGAAGCTCCCAAAGAAGGATGCGGCTACCGTGG
CGATGAAGGTCTTGATTGACCAGGTGCTGTGGGCTCCTATTTTCACTGTT
ATTTTCTTCGCGTGGATTGAGCTGTTGCAGGGGTCTGGGTTGCAGAAGAT
TAAGGCAAAGATCAACCAGGATCTGGTGCGGGGTGTGACAGCATCGTGGA
AGGTCTGGCCTTTGGTGCACGTGATTAACTTCCGTTTTATTCCTTCCCAG
CAGCGATTGTTGTACATCAATACGATCCAGATTGGCTACAACGTTTTCCT
GTCCATGTTGGCCTCCCGCACGGGTTAAATGCTTTGGGACAAGTACAACG
AGGTTCTCGAATCCAGCCCGTTGCCGACCAAGGCGGTCACGTCTCTGGTG
GGCTTTACAATCGGGGATCTGCTGGCTCAGAACTTCTTGGGGGAGAAGGG
GGCGCCACTTGATGTGAAGCGGTTGTTGCGATTGGCTTCTTTTGGGCTGG
CGGTGCACGGGCCTGTTGGTCACTTTTTTTATGGGGCTCTGGATGAGAAG
CTCCCAAAGAAGGATGCGGCTACCGTGGCGATGAAGGTCTTGATTGACCA
GGTGCTGTGGGCTCCTATTTTCACTGTTATTTTCTTCGCGTGGATTGAGC
TGTTGCAGGGGTCTGGGTTGCAGAAGATTAAGGCAAAGATCAACCAGGAT
CTGGTGCGGGGTGTGACAGCATCGTGGAAGGTCTGGCCTTTGGTGCACGT
GATTAACTTCCGTTTTATTCCTTCCCAGCAGCGATTGTTGTACATCAATA
CGATCCAGATTGGCTACAACGTTTTCCTGTCCATGTTGGCCTCCCGCACG
GGTTAAATGCTTTGGGACAAGTACAACGAGGTTCTCGAATCCAGCCCGTT
GCCGACCAAGGCGGTCACGTCTCTGGTGGGCTTTACAATCGGGGATCTGC
TGGCTCAGAACTTCTTGGGGGAGAAGGGGGCGCCACTTGATGTGAAGCGG
TTGTTGCGATTGGCTTCTTTTGGGCTGGCGGTGCACGGGCCTGTTGGTCA
CTTTTTTTATGGGGCTCTGGATGAGAAGCTCCCAAAGAAGGATGCGGCTA
CCGTGGCGATGAAGGTCTTGATTGACCAGGTGCTGTGGGCTCCTATTTTC
ACTGTTATTTTCTTCGCGTGGATTGAGCTGTTGCAGGGGTCTGGGTTGCA
GAAGATTAAGGCAAAGATCAACCAGGATCTGGTGCGGGGTGTGACAGCAT
CGTGGAAGGTCTGGCCTTTGGTGCACGTGATTAACTTCCGTTTTATTCCT
TCCCAGCAGCGATTGTTGTACATCAATACGATCCAGATTGGCTACAACGT
TTTCCTGTCCATGTTGGCCTCCCGCACGGGTTAA back to top
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