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Properties
Property Name | Value |
TranscriptId | 579658 |
Track | FilteredModels2 |
ProteinId | 579572 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_4 | supercontig | scaffold_4:1133125..1134494 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2235 ID=mRNA_2235|Name=jgi.p|Nanoce1779_2|579572|organism=Nannochloropsis oceanica|type=mRNA|length=989bp ACAGACACACGCCCACTTCGTCTACTGCTAAGCGTTAAGCACTTATGTCG GAAGAGAAGTACTTGATCTTCGGGAAGAACGGATGGATCGGGGGAAAGCT CATCGACCTGCTTAAGCAGCAAGGCAAAACGGTGGTGTTGGGCCAGTCCC GCCTCGAGAACCGCGAGGCGCTCTTCGCAGAGCTGGACGACGTTAAGCCG ACCCACGTCTTGGACGCAGCAGGCGTGACGGGCCGCCCGAATATTGATTG GTGCGAGACGCACCAGGTGGAAACGATTCGTACGAATGTCATAGGAACGT TGAATCTGGCGGAGGGATGCCATCTGAAGGGGATTCACATGACGTTGTAT GCCACGGGATGTATTTTTGAGTACGACGAGAAGCACCCTATCGGCGGCCC GGGTTTCACGGAGGAGGACTCGCCTAACTTCTTCGGGTCATTCTATAGTA AGACTAAGGCCTATATGGAGGACATGTTGAAGAGCTACAAGAACGTGTGC ATCTTGCGGGTGCGCATGCCCATCTCTGATGACCTCAATCCCCGTAATTT TGTCACCAAAATTGTGAGCTACGACCGCGTGGTGGACGTACCTAACTCCA TGACGGTACTGACGGACCTCTTGCCAATCTCCTTAATTATGAGCCAGCGC AAGCTCACAGGCATCTACAATTTCACCAACCCCGGCGCCATCTCTCACAA CCAAATTCTGACCCTGTACAAGAAGCATGTCGACCCGTCCTACACCTGGC AGAATTTCACGATCGAGGAACAAAACAAGATTCTTGCCGCCAAGCGCTCC AACAATGAGCTGGACACGACCAAGTTCTGTGCCGCGCTTCCCGATATTCA AATTCCAGATATCCATGCAGCCTGCGAAGGGGTGCGTACCCCTCCCTCCC TCCCTTCCTCCCTCCCCGTTTCCCTCCTCTCCTTGGGCGCCGAATGACCG CATGACCAAGTATTGTGCCATGCTACCCGGGTATAAAGG back to topprotein sequence of jgi.p|Nanoce1779_2|579572 >mRNA_2235-protein ID=mRNA_2235-protein|Name=jgi.p|Nanoce1779_2|579572|organism=Nannochloropsis oceanica|type=polypeptide|length=301bp MSEEKYLIFGKNGWIGGKLIDLLKQQGKTVVLGQSRLENREALFAELDDV KPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEGCHLKGIHMT LYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYKN VCILRVRMPISDDLNPRNFVTKIVSYDRVVDVPNSMTVLTDLLPISLIMS QRKLTGIYNFTNPGAISHNQILTLYKKHVDPSYTWQNFTIEEQNKILAAK RSNNELDTTKFCAALPDIQIPDIHAACEGVRTPPSLPSSLPVSLLSLGAE * back to topmRNA from alignment at scaffold_4:1133125..1134494- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2235 ID=mRNA_2235|Name=jgi.p|Nanoce1779_2|579572|organism=Nannochloropsis oceanica|type=mRNA|length=1370bp|location=Sequence derived from alignment at scaffold_4:1133125..1134494- (Nannochloropsis oceanica) ACAGACACACGCCCACTTCGTCTACTGCTAAGCGTTAAGCACTTATGTCG
GAAGAGGTATGTGCGGGATGTGGTATTTTGGGTCAGGTTCTGTGGGCCGT
GTCCCTCTCATCTTGATTTGTCCCATCTTCTTCATCCACGCGAGTAACTA
CTATCACAACGCACTCGCTCACTCTCTGCCCATACCCCACGCCGAGCAGA
AGTACTTGATCTTCGGGAAGAACGGATGGATCGGGGGAAAGCTCATCGAC
CTGCTTAAGCAGCAAGGCAAAACGGTGGTGTTGGGCCAGTCCCGCCTCGA
GAACCGCGAGGCGCTCTTCGCAGAGCTGGACGACGTTAAGCCGACCCACG
TCTTGGACGCAGCAGGCGTGACGGGCCGCCCGAATATTGATTGGTGCGAG
ACGCACCAGGTGGAAACGATTCGTACGAATGTCATAGGAACGTTGAATCT
GGCGGAGGGATGCCATCTGAAGGGGATTCACATGACGTTGTATGCCACGG
GATGTATTTTTGAGTACGACGAGAAGCACCCTATCGGCGGCCCGGGTTTC
ACGGAGGAGGACTCGCCTAACTTCTTCGGGTCATTCTATAGTAAGACTAA
GGCCTATATGGAGGACATGTTGAAGAGCTACAAGAACGTGTGCATCTTGC
GGGTGCGCATGCCCATCTCTGATGACCTCAATCCCCGTAATTTTGTCACC
AAAATTGTGAGCTACGACCGCGTGGTGGACGTACCTAACTCCATGACGGT
ACTGACGGACCTCTTGCCAATCTCCTTAATTATGAGCCAGCGCAAGCTCA
CAGGTACGTGGGGAGGGAGGAAGGGAGGGAAGGAGGGAGGGATAGAGGGA
AGGAGGGGACTTGGAAGATGTGAGGGTGTATGGCTCACTCCCCCTCTCTC
CCTCCCTCTCTTCCTCTCTCTCAAGGCATCTACAATTTCACCAACCCCGG
CGCCATCTCTCACAACCAAATTCTGACCCTGTACAAGAAGCATGTCGACC
CGTCCTACACCTGGCAGAATTTCACGGTACGTTTCTCCCCCCCTCCCCCT
CTCCCTCCCTCCCTCCCCCCCCTCGGCTTTTACTTCTCCTGACCCCTCCC
TCCTCCCTCTTCCTCCCCTCCCTCCTTCCCCTCCTCCTTCAGATCGAGGA
ACAAAACAAGATTCTTGCCGCCAAGCGCTCCAACAATGAGCTGGACACGA
CCAAGTTCTGTGCCGCGCTTCCCGATATTCAAATTCCAGATATCCATGCA
GCCTGCGAAGGGGTGCGTACCCCTCCCTCCCTCCCTTCCTCCCTCCCCGT
TTCCCTCCTCTCCTTGGGCGCCGAATGACCGCATGACCAAGTATTGTGCC
ATGCTACCCGGGTATAAAGG back to topCoding sequence (CDS) from alignment at scaffold_4:1133125..1134494- >mRNA_2235 ID=mRNA_2235|Name=jgi.p|Nanoce1779_2|579572|organism=Nannochloropsis oceanica|type=CDS|length=3612bp|location=Sequence derived from alignment at scaffold_4:1133125..1134494- (Nannochloropsis oceanica) ATCGAGGAACAAAACAAGATTCTTGCCGCCAAGCGCTCCAACAATGAGCT GGACACGACCAAGTTCTGTGCCGCGCTTCCCGATATTCAAATTCCAGATA TCCATGCAGCCTGCGAAGGGGTGCGTACCCCTCCCTCCCTCCCTTCCTCC CTCCCCGTTTCCCTCCTCTCCTTGGGCGCCGAATGAGCATCTACAATTTC ACCAACCCCGGCGCCATCTCTCACAACCAAATTCTGACCCTGTACAAGAA GCATGTCGACCCGTCCTACACCTGGCAGAATTTCACGAAGTACTTGATCT TCGGGAAGAACGGATGGATCGGGGGAAAGCTCATCGACCTGCTTAAGCAG CAAGGCAAAACGGTGGTGTTGGGCCAGTCCCGCCTCGAGAACCGCGAGGC GCTCTTCGCAGAGCTGGACGACGTTAAGCCGACCCACGTCTTGGACGCAG CAGGCGTGACGGGCCGCCCGAATATTGATTGGTGCGAGACGCACCAGGTG GAAACGATTCGTACGAATGTCATAGGAACGTTGAATCTGGCGGAGGGATG CCATCTGAAGGGGATTCACATGACGTTGTATGCCACGGGATGTATTTTTG AGTACGACGAGAAGCACCCTATCGGCGGCCCGGGTTTCACGGAGGAGGAC TCGCCTAACTTCTTCGGGTCATTCTATAGTAAGACTAAGGCCTATATGGA GGACATGTTGAAGAGCTACAAGAACGTGTGCATCTTGCGGGTGCGCATGC CCATCTCTGATGACCTCAATCCCCGTAATTTTGTCACCAAAATTGTGAGC TACGACCGCGTGGTGGACGTACCTAACTCCATGACGGTACTGACGGACCT CTTGCCAATCTCCTTAATTATGAGCCAGCGCAAGCTCACAGATGTCGGAA GAGATCGAGGAACAAAACAAGATTCTTGCCGCCAAGCGCTCCAACAATGA GCTGGACACGACCAAGTTCTGTGCCGCGCTTCCCGATATTCAAATTCCAG ATATCCATGCAGCCTGCGAAGGGGTGCGTACCCCTCCCTCCCTCCCTTCC TCCCTCCCCGTTTCCCTCCTCTCCTTGGGCGCCGAATGAGCATCTACAAT TTCACCAACCCCGGCGCCATCTCTCACAACCAAATTCTGACCCTGTACAA GAAGCATGTCGACCCGTCCTACACCTGGCAGAATTTCACGAAGTACTTGA TCTTCGGGAAGAACGGATGGATCGGGGGAAAGCTCATCGACCTGCTTAAG CAGCAAGGCAAAACGGTGGTGTTGGGCCAGTCCCGCCTCGAGAACCGCGA GGCGCTCTTCGCAGAGCTGGACGACGTTAAGCCGACCCACGTCTTGGACG CAGCAGGCGTGACGGGCCGCCCGAATATTGATTGGTGCGAGACGCACCAG GTGGAAACGATTCGTACGAATGTCATAGGAACGTTGAATCTGGCGGAGGG ATGCCATCTGAAGGGGATTCACATGACGTTGTATGCCACGGGATGTATTT TTGAGTACGACGAGAAGCACCCTATCGGCGGCCCGGGTTTCACGGAGGAG GACTCGCCTAACTTCTTCGGGTCATTCTATAGTAAGACTAAGGCCTATAT GGAGGACATGTTGAAGAGCTACAAGAACGTGTGCATCTTGCGGGTGCGCA TGCCCATCTCTGATGACCTCAATCCCCGTAATTTTGTCACCAAAATTGTG AGCTACGACCGCGTGGTGGACGTACCTAACTCCATGACGGTACTGACGGA CCTCTTGCCAATCTCCTTAATTATGAGCCAGCGCAAGCTCACAGATGTCG GAAGAGATCGAGGAACAAAACAAGATTCTTGCCGCCAAGCGCTCCAACAA TGAGCTGGACACGACCAAGTTCTGTGCCGCGCTTCCCGATATTCAAATTC CAGATATCCATGCAGCCTGCGAAGGGGTGCGTACCCCTCCCTCCCTCCCT TCCTCCCTCCCCGTTTCCCTCCTCTCCTTGGGCGCCGAATGAGCATCTAC AATTTCACCAACCCCGGCGCCATCTCTCACAACCAAATTCTGACCCTGTA CAAGAAGCATGTCGACCCGTCCTACACCTGGCAGAATTTCACGAAGTACT TGATCTTCGGGAAGAACGGATGGATCGGGGGAAAGCTCATCGACCTGCTT AAGCAGCAAGGCAAAACGGTGGTGTTGGGCCAGTCCCGCCTCGAGAACCG CGAGGCGCTCTTCGCAGAGCTGGACGACGTTAAGCCGACCCACGTCTTGG ACGCAGCAGGCGTGACGGGCCGCCCGAATATTGATTGGTGCGAGACGCAC CAGGTGGAAACGATTCGTACGAATGTCATAGGAACGTTGAATCTGGCGGA GGGATGCCATCTGAAGGGGATTCACATGACGTTGTATGCCACGGGATGTA TTTTTGAGTACGACGAGAAGCACCCTATCGGCGGCCCGGGTTTCACGGAG GAGGACTCGCCTAACTTCTTCGGGTCATTCTATAGTAAGACTAAGGCCTA TATGGAGGACATGTTGAAGAGCTACAAGAACGTGTGCATCTTGCGGGTGC GCATGCCCATCTCTGATGACCTCAATCCCCGTAATTTTGTCACCAAAATT GTGAGCTACGACCGCGTGGTGGACGTACCTAACTCCATGACGGTACTGAC GGACCTCTTGCCAATCTCCTTAATTATGAGCCAGCGCAAGCTCACAGATG TCGGAAGAGATCGAGGAACAAAACAAGATTCTTGCCGCCAAGCGCTCCAA CAATGAGCTGGACACGACCAAGTTCTGTGCCGCGCTTCCCGATATTCAAA TTCCAGATATCCATGCAGCCTGCGAAGGGGTGCGTACCCCTCCCTCCCTC CCTTCCTCCCTCCCCGTTTCCCTCCTCTCCTTGGGCGCCGAATGAGCATC TACAATTTCACCAACCCCGGCGCCATCTCTCACAACCAAATTCTGACCCT GTACAAGAAGCATGTCGACCCGTCCTACACCTGGCAGAATTTCACGAAGT ACTTGATCTTCGGGAAGAACGGATGGATCGGGGGAAAGCTCATCGACCTG CTTAAGCAGCAAGGCAAAACGGTGGTGTTGGGCCAGTCCCGCCTCGAGAA CCGCGAGGCGCTCTTCGCAGAGCTGGACGACGTTAAGCCGACCCACGTCT TGGACGCAGCAGGCGTGACGGGCCGCCCGAATATTGATTGGTGCGAGACG CACCAGGTGGAAACGATTCGTACGAATGTCATAGGAACGTTGAATCTGGC GGAGGGATGCCATCTGAAGGGGATTCACATGACGTTGTATGCCACGGGAT GTATTTTTGAGTACGACGAGAAGCACCCTATCGGCGGCCCGGGTTTCACG GAGGAGGACTCGCCTAACTTCTTCGGGTCATTCTATAGTAAGACTAAGGC CTATATGGAGGACATGTTGAAGAGCTACAAGAACGTGTGCATCTTGCGGG TGCGCATGCCCATCTCTGATGACCTCAATCCCCGTAATTTTGTCACCAAA ATTGTGAGCTACGACCGCGTGGTGGACGTACCTAACTCCATGACGGTACT GACGGACCTCTTGCCAATCTCCTTAATTATGAGCCAGCGCAAGCTCACAG ATGTCGGAAGAG back to top
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