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Properties
| Property Name | Value |
|---|
| TranscriptId | 608468 |
| Track | FilteredModels2 |
| ProteinId | 608382 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_41 | supercontig | scaffold_41:131672..133600 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9929 ID=mRNA_9929|Name=jgi.p|Nanoce1779_2|608382|organism=Nannochloropsis oceanica|type=mRNA|length=1216bp
CAACAGGCCAACCCCAAGCAACCAATCCAAGTGGTTAATAAAAATGCCGC
GCCTTGCACACTCTTTCACCTTCGCCCTTGCCCTCAACCTTGCCATCGTG
GGCACGGTCCAAGCGCAGACGCTCCGTGGTGCCGGAGACAAGGGCACTGC
TACTTATACCTTCAACCAGCCCAGGATCAATCGCGCCCGTGTCGACTGGT
GCCATGGTTATGATTTCGGCATGGGACCCGGGACCGACTACCCTGCTGCA
TTCAAGGGATGTGGAGAGGAGGCAGCTAATGCCTTTTGCAAAATGAGCGG
CTATGAAAAGGCAGAGTCGTACGAGAAGGACGCTGGTATCACTGATGTTA
CGATTTACCTTCAGCAGATGAAGCTCAACCCCAACCCCACCCGCGACGCC
TTCAAGGTCATTGTCTGCTCTCGCTCCGACAATAACCCCCCCCCTGCCGT
CCTCCCTCCCGCCGTGTCGGAGACGTGGCGCTATCCCAGGGTGTCTGGCA
TCCGCATGGACTGGTGCAGTGCTTACGATGGCCGTGTCGGCGGCCCACCT
AACAATCCCGATGGTAAGCCTTCCTTTCATCCCTTATTTCTACCTCACTA
GCATGCTTTGCCTGTCACGAGCCGGAGAAAGACAAGCAACTAAAACCAAT
AAGTAGAAAAAAATCGAAAACAATATGACAAATAATTTATAAATTATGTA
ACAAGTTGAATGAACTAATGAATAGAATATGTTTGTATGTATAAATTAAC
CCATGAAAGTGAGTAAAATGATCACGTCTATAAGTAAGTCAGTAAAATAG
AATGTGATAAAATAAATGCAGAAATATGTACAAATAAATAAAGTATAAAA
TAAAAATAAAATTAATCAATTGCACCCATCATGTACCTACATGCATACAT
ATATATTCATAAACACAGCGTACCTCGCCTGCGGCCAATCTGCCGCAGAC
TCCTTCTGTCGCTCCGTAGGGTATCAATCCGCGGGGCGGTTCGAGAAAGA
CGAGCAGATCGAGGATGAAACAATTTTCATAGCCCAAAGCGCGCTCAACA
CTCACAGTCCCAAGCGTGACGCATTCCTCTACATCACCTGCGTGAAATAA
AAGCCTTCCTTTCTTCCTTCGCCCCCTCCCTTCTTCCCACCCTCCCTCCC
TCCCTCCCTGCCCCAAAGAGCGTCCGACATATTTCCTGCGTGATGAAAAG
ACATGCATGACGTGAA back to topprotein sequence of jgi.p|Nanoce1779_2|608382 >mRNA_9929-protein ID=mRNA_9929-protein|Name=jgi.p|Nanoce1779_2|608382|organism=Nannochloropsis oceanica|type=polypeptide|length=186bp
MPRLAHSFTFALALNLAIVGTVQAQTLRGAGDKGTATYTFNQPRINRARV
DWCHGYDFGMGPGTDYPAAFKGCGEEAANAFCKMSGYEKAESYEKDAGIT
DVTIYLQQMKLNPNPTRDAFKVIVCSRSDNNPPPAVLPPAVSETWRYPRV
SGIRMDWCSAYDGRVGGPPNNPDGKPSFHPLFLPH* back to topmRNA from alignment at scaffold_41:131672..133600- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9929 ID=mRNA_9929|Name=jgi.p|Nanoce1779_2|608382|organism=Nannochloropsis oceanica|type=mRNA|length=1929bp|location=Sequence derived from alignment at scaffold_41:131672..133600- (Nannochloropsis oceanica)
CAACAGGCCAACCCCAAGCAACCAATCCAAGTGGTTAATAAAAATGCCGC
GCCTTGCACACTCTTTCACCTTCGCCCTTGCCCTCAACCTTGCCATCGTG
GGCACGGTCCAAGCGCAGGTATGTGTCCGTGTACAGGTGAAGAGCAGGTG
TCGAGATGTGTGGCATTATCCCACTTAACTCTCTCTCCCTCCCTCCCTTC
CGACATAGACGCTCCGTGGTGCCGGAGACAAGGGCACTGCTACTTATACC
TTCAACCAGCCCAGGATCAATCGCGCCCGTGTCGACTGGTGCCATGGTAC
GTGCATGTTTACCCTCTTTCTCCCCCTTTCCCGCCCCCTCTTCCTCCTCC
TCTTCCTCCCCGTCTTTCTCGCTCTCCCTCCATCCCTCTCTCTCTGCTCA
CTCTCTTTCCCCCTCTCCCCTCCCTCTCCCTTTCTGCCAGGTTATGATTT
CGGCATGGGACCCGGGACCGACTACCCTGCTGCATTCAAGGGATGTGGAG
AGGAGGCAGCTAATGCCTTTTGCAAAATGAGCGGCTATGAAAAGGCAGAG
GTAGGAAGGTCGGGAGGAAGGAGGAGGAGGAGGGAGGGGCAAAGGGAGGG
AGGGAGGGGGAAACGGGAGAAACGGGAGAAACGAAGGTAGACAGAGGACC
GAAGGATTGTATCAACGAATTTAACAAGCGGCCAACCGGACGTGAGCGAT
AAAATCGTCCTCCATCTCACTGTAGCCACCTCATTCGCTCCCTCTTTTCC
TCCCTCCGTCCTTCCCTCCCCTAGTCGTACGAGAAGGACGCTGGTATCAC
TGATGTTACGATTTACCTTCAGCAGATGAAGCTCAACCCCAACCCCACCC
GCGACGCCTTCAAGGTCATTGTCTGCTCTCGCTCCGGTACGGAGGGCAGG
AGAGAGGGCGGGACAGAGGTGGGAGTAGACGGCTTTAATATCGATCATCG
AGGGTGCAATCGCTTATCCTCATCGCTTCTTCTTTCGACCTCATCCTCCC
TACCGCAGACAATAACCCCCCCCCTGCCGTCCTCCCTCCCGCCGTGTCGG
AGACGTGGCGCTATCCCAGGGTACGCACTTCCTTCCTTCCCTCTCTGCCA
CTGATCCCTCTATTCACTCGATTTTTAAAATGTCGTCCTCACACCGACAC
AACCATCCACCCTCCCTCCTTCCCTCCTTCCGTCCCTCTCTCCCTCCATC
CAGGTGTCTGGCATCCGCATGGACTGGTGCAGTGCTTACGATGGCCGTGT
CGGCGGCCCACCTAACAATCCCGATGGTAAGCCTTCCTTTCATCCCTTAT
TTCTACCTCACTAGCATGCTTTGCCTGTCACGAGCCGGAGAAAGACAAGC
AACTAAAACCAATAAGTAGAAAAAAATCGAAAACAATATGACAAATAATT
TATAAATTATGTAACAAGTTGAATGAACTAATGAATAGAATATGTTTGTA
TGTATAAATTAACCCATGAAAGTGAGTAAAATGATCACGTCTATAAGTAA
GTCAGTAAAATAGAATGTGATAAAATAAATGCAGAAATATGTACAAATAA
ATAAAGTATAAAATAAAAATAAAATTAATCAATTGCACCCATCATGTACC
TACATGCATACATATATATTCATAAACACAGCGTACCTCGCCTGCGGCCA
ATCTGCCGCAGACTCCTTCTGTCGCTCCGTAGGGTATCAATCCGCGGGGC
GGTTCGAGAAAGACGAGCAGATCGAGGATGAAACAATTTTCATAGCCCAA
AGCGCGCTCAACACTCACAGTCCCAAGCGTGACGCATTCCTCTACATCAC
CTGCGTGAAATAAAAGCCTTCCTTTCTTCCTTCGCCCCCTCCCTTCTTCC
CACCCTCCCTCCCTCCCTCCCTGCCCCAAAGAGCGTCCGACATATTTCCT
GCGTGATGAAAAGACATGCATGACGTGAA back to topCoding sequence (CDS) from alignment at scaffold_41:131672..133600- >mRNA_9929 ID=mRNA_9929|Name=jgi.p|Nanoce1779_2|608382|organism=Nannochloropsis oceanica|type=CDS|length=3348bp|location=Sequence derived from alignment at scaffold_41:131672..133600- (Nannochloropsis oceanica)
GTGTCTGGCATCCGCATGGACTGGTGCAGTGCTTACGATGGCCGTGTCGG
CGGCCCACCTAACAATCCCGATGGTAAGCCTTCCTTTCATCCCTTATTTC
TACCTCACTAGACAATAACCCCCCCCCTGCCGTCCTCCCTCCCGCCGTGT
CGGAGACGTGGCGCTATCCCAGGTCGTACGAGAAGGACGCTGGTATCACT
GATGTTACGATTTACCTTCAGCAGATGAAGCTCAACCCCAACCCCACCCG
CGACGCCTTCAAGGTCATTGTCTGCTCTCGCTCCGGTTATGATTTCGGCA
TGGGACCCGGGACCGACTACCCTGCTGCATTCAAGGGATGTGGAGAGGAG
GCAGCTAATGCCTTTTGCAAAATGAGCGGCTATGAAAAGGCAGAGACGCT
CCGTGGTGCCGGAGACAAGGGCACTGCTACTTATACCTTCAACCAGCCCA
GGATCAATCGCGCCCGTGTCGACTGGTGCCATGATGCCGCGCCTTGCACA
CTCTTTCACCTTCGCCCTTGCCCTCAACCTTGCCATCGTGGGCACGGTCC
AAGCGCAGGTGTCTGGCATCCGCATGGACTGGTGCAGTGCTTACGATGGC
CGTGTCGGCGGCCCACCTAACAATCCCGATGGTAAGCCTTCCTTTCATCC
CTTATTTCTACCTCACTAGACAATAACCCCCCCCCTGCCGTCCTCCCTCC
CGCCGTGTCGGAGACGTGGCGCTATCCCAGGTCGTACGAGAAGGACGCTG
GTATCACTGATGTTACGATTTACCTTCAGCAGATGAAGCTCAACCCCAAC
CCCACCCGCGACGCCTTCAAGGTCATTGTCTGCTCTCGCTCCGGTTATGA
TTTCGGCATGGGACCCGGGACCGACTACCCTGCTGCATTCAAGGGATGTG
GAGAGGAGGCAGCTAATGCCTTTTGCAAAATGAGCGGCTATGAAAAGGCA
GAGACGCTCCGTGGTGCCGGAGACAAGGGCACTGCTACTTATACCTTCAA
CCAGCCCAGGATCAATCGCGCCCGTGTCGACTGGTGCCATGATGCCGCGC
CTTGCACACTCTTTCACCTTCGCCCTTGCCCTCAACCTTGCCATCGTGGG
CACGGTCCAAGCGCAGGTGTCTGGCATCCGCATGGACTGGTGCAGTGCTT
ACGATGGCCGTGTCGGCGGCCCACCTAACAATCCCGATGGTAAGCCTTCC
TTTCATCCCTTATTTCTACCTCACTAGACAATAACCCCCCCCCTGCCGTC
CTCCCTCCCGCCGTGTCGGAGACGTGGCGCTATCCCAGGTCGTACGAGAA
GGACGCTGGTATCACTGATGTTACGATTTACCTTCAGCAGATGAAGCTCA
ACCCCAACCCCACCCGCGACGCCTTCAAGGTCATTGTCTGCTCTCGCTCC
GGTTATGATTTCGGCATGGGACCCGGGACCGACTACCCTGCTGCATTCAA
GGGATGTGGAGAGGAGGCAGCTAATGCCTTTTGCAAAATGAGCGGCTATG
AAAAGGCAGAGACGCTCCGTGGTGCCGGAGACAAGGGCACTGCTACTTAT
ACCTTCAACCAGCCCAGGATCAATCGCGCCCGTGTCGACTGGTGCCATGA
TGCCGCGCCTTGCACACTCTTTCACCTTCGCCCTTGCCCTCAACCTTGCC
ATCGTGGGCACGGTCCAAGCGCAGGTGTCTGGCATCCGCATGGACTGGTG
CAGTGCTTACGATGGCCGTGTCGGCGGCCCACCTAACAATCCCGATGGTA
AGCCTTCCTTTCATCCCTTATTTCTACCTCACTAGACAATAACCCCCCCC
CTGCCGTCCTCCCTCCCGCCGTGTCGGAGACGTGGCGCTATCCCAGGTCG
TACGAGAAGGACGCTGGTATCACTGATGTTACGATTTACCTTCAGCAGAT
GAAGCTCAACCCCAACCCCACCCGCGACGCCTTCAAGGTCATTGTCTGCT
CTCGCTCCGGTTATGATTTCGGCATGGGACCCGGGACCGACTACCCTGCT
GCATTCAAGGGATGTGGAGAGGAGGCAGCTAATGCCTTTTGCAAAATGAG
CGGCTATGAAAAGGCAGAGACGCTCCGTGGTGCCGGAGACAAGGGCACTG
CTACTTATACCTTCAACCAGCCCAGGATCAATCGCGCCCGTGTCGACTGG
TGCCATGATGCCGCGCCTTGCACACTCTTTCACCTTCGCCCTTGCCCTCA
ACCTTGCCATCGTGGGCACGGTCCAAGCGCAGGTGTCTGGCATCCGCATG
GACTGGTGCAGTGCTTACGATGGCCGTGTCGGCGGCCCACCTAACAATCC
CGATGGTAAGCCTTCCTTTCATCCCTTATTTCTACCTCACTAGACAATAA
CCCCCCCCCTGCCGTCCTCCCTCCCGCCGTGTCGGAGACGTGGCGCTATC
CCAGGTCGTACGAGAAGGACGCTGGTATCACTGATGTTACGATTTACCTT
CAGCAGATGAAGCTCAACCCCAACCCCACCCGCGACGCCTTCAAGGTCAT
TGTCTGCTCTCGCTCCGGTTATGATTTCGGCATGGGACCCGGGACCGACT
ACCCTGCTGCATTCAAGGGATGTGGAGAGGAGGCAGCTAATGCCTTTTGC
AAAATGAGCGGCTATGAAAAGGCAGAGACGCTCCGTGGTGCCGGAGACAA
GGGCACTGCTACTTATACCTTCAACCAGCCCAGGATCAATCGCGCCCGTG
TCGACTGGTGCCATGATGCCGCGCCTTGCACACTCTTTCACCTTCGCCCT
TGCCCTCAACCTTGCCATCGTGGGCACGGTCCAAGCGCAGGTGTCTGGCA
TCCGCATGGACTGGTGCAGTGCTTACGATGGCCGTGTCGGCGGCCCACCT
AACAATCCCGATGGTAAGCCTTCCTTTCATCCCTTATTTCTACCTCACTA
GACAATAACCCCCCCCCTGCCGTCCTCCCTCCCGCCGTGTCGGAGACGTG
GCGCTATCCCAGGTCGTACGAGAAGGACGCTGGTATCACTGATGTTACGA
TTTACCTTCAGCAGATGAAGCTCAACCCCAACCCCACCCGCGACGCCTTC
AAGGTCATTGTCTGCTCTCGCTCCGGTTATGATTTCGGCATGGGACCCGG
GACCGACTACCCTGCTGCATTCAAGGGATGTGGAGAGGAGGCAGCTAATG
CCTTTTGCAAAATGAGCGGCTATGAAAAGGCAGAGACGCTCCGTGGTGCC
GGAGACAAGGGCACTGCTACTTATACCTTCAACCAGCCCAGGATCAATCG
CGCCCGTGTCGACTGGTGCCATGATGCCGCGCCTTGCACACTCTTTCACC
TTCGCCCTTGCCCTCAACCTTGCCATCGTGGGCACGGTCCAAGCGCAG back to top
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