|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 533845 |
| Track | FilteredModels2 |
| ProteinId | 533759 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_45 | supercontig | scaffold_45:36234..37890 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9849 ID=mRNA_9849|Name=jgi.p|Nanoce1779_2|533759|organism=Nannochloropsis oceanica|type=mRNA|length=1170bp
ATGGGAAGGTATTTTGACTTGACGCCGACGGCAGGAGGAGGGAGGGAAGG
AGGAGGAGAGGGAGGGGGAAATCGAACCTTGTCCAAGTGGATAAAACCTC
TCTTCTCCCTCCCCTTCCTTCCTTCCTTCCTCCCTCCCTTTACCAAATCC
TCCCCCCCCTCTTGGCTCTACCCTTCCCTTTACCCACGGCTGCGGCTTCC
GACCCTTTCTCCTTCCCTGTCTCCTCCCGTATGCTTGCGAGATTTCGAAT
TGCTGCGTGTGATTGGTCAAGGATCTTTTGGTCGTGTGTTTTTGGTGAGA
CATACGAGGCATCACGGGGGCGTCACCTGGAAGGCCTTTCCCCCTTCCCT
TCCTCCTCCTCCTCCATGCAGCCACGCAATCACTGAGCGGAGACTCCTTA
CACAGCTCTCCCATCCTTTCATCCTCCCCCTGCACTTCGCCTTTCAAACG
CCCGAAAAGCTTTATTTGATTACTGAATACTGCCAAGGGGGAGAACTATA
TTTCCACCTTCGGAAACACCGAACGTTCTCCCTGGAACTGACCAGGTTCT
ATGCGAGCGAATTATGCGCCGTCCTTTCGTACTTAAACAAGAAGAAGATC
ATCTTTCGAGATTTGAAGCCGGAAAATATCTTGATGGACAAACGTGGGCA
CATCAAGCTTGTGGACTTCGGGCTAGCAAAGGGAGGAATGGAGGGAGACA
GCTTAACGAAGACATTCTGCGGGACACCTGAGTACTTGGCGCCGGAGATG
GTGACCCGCGCAGGGTACACAGGTGCAGTGGACTGGTGGGGCCTGGGGGT
CGTCTGCTTCGAGATGCTGTTCGGCTTCCCGCCTTTTCACGACCGAGATT
TCCATAAAATGTGCAGCAATATTTTGAAGAAACCTCTGCGTTTTCCGTGG
AAGCTCCCGCCGGAGGCACGGGCGTTTTTGAAGGGGCTGTTGGACAGGAA
TCCGTCCCGACGGTTGGGATTCATCAACCACAACCACAAAATGGACATCA
AAGCTCACCCTTTCTTCCACGGCATAGACTGGGAGATGCTCGAAAGCGGT
GAAATCCCTCCACCACAATTGCTACCACAGGAAGACAAGAAAGTGGAAGA
CGTAAGGTACGATTCCCATTTCATTCAATTTATTTTATTGTGTATATTTT
GTATCTCATCATGTGAATGA back to topprotein sequence of jgi.p|Nanoce1779_2|533759 >mRNA_9849-protein ID=mRNA_9849-protein|Name=jgi.p|Nanoce1779_2|533759|organism=Nannochloropsis oceanica|type=polypeptide|length=390bp
MGRYFDLTPTAGGGREGGGEGGGNRTLSKWIKPLFSLPFLPSFLPPFTKS
SPPSWLYPSLYPRLRLPTLSPSLSPPVCLRDFELLRVIGQGSFGRVFLVR
HTRHHGGVTWKAFPPSLPPPPPCSHAITERRLLTQLSHPFILPLHFAFQT
PEKLYLITEYCQGGELYFHLRKHRTFSLELTRFYASELCAVLSYLNKKKI
IFRDLKPENILMDKRGHIKLVDFGLAKGGMEGDSLTKTFCGTPEYLAPEM
VTRAGYTGAVDWWGLGVVCFEMLFGFPPFHDRDFHKMCSNILKKPLRFPW
KLPPEARAFLKGLLDRNPSRRLGFINHNHKMDIKAHPFFHGIDWEMLESG
EIPPPQLLPQEDKKVEDVRYDSHFIQFILLCIFCISSCE* back to topmRNA from alignment at scaffold_45:36234..37890- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9849 ID=mRNA_9849|Name=jgi.p|Nanoce1779_2|533759|organism=Nannochloropsis oceanica|type=mRNA|length=1657bp|location=Sequence derived from alignment at scaffold_45:36234..37890- (Nannochloropsis oceanica)
ATGGGAAGGTATTTTGACTTGACGCCGACGGCAGGAGGAGGGAGGGAAGG
AGGAGGAGAGGGAGGGGGAAATCGAACCTTGTCCAAGTGGATAAAACCTC
TCTTCTCCCTCCCCTTCCTTCCTTCCTTCCTCCCTCCCTTTACCAAATCC
TCCCCCCCCTCTTGGCTCTACCCTTCCCTTTACCCACGGCTGCGGCTTCC
GACCCTTTCTCCTTCCCTGTCTCCTCCCGTATGCTTGCGAGATTTCGAAT
TGCTGCGTGTGATTGGTCAAGGATCTTTTGGTCGTGTGTTTTTGGTGAGA
CATACGAGGCATCACGGGGGCGTCACCTGTCTTTCTTCTTCGACTTCTTT
TGCTGTTTGTAGTGTCACTTCTTCTTCTCCTTTTCCTCCCTCTTTAGCTG
TTCCTGCTCCCCCACCGTCTTCCTATTTATCTTCTTTGTCCATTTCGTCG
TCAAGAAGAAAAAAGGAGGAGGAAGACGAGGAAGGGAGGGAGGGTATTGG
GCGGGTTTACGCGATGAAAGTGGCCTGGAAAACCAAGCAGCACCGGGAGG
AAAGAGGGAGGAAGGGAGGGAAGGCCTTTCCCCCTTCCCTTCCTCCTCCT
CCTCCATGCAGCCACGCAATCACTGAGCGGAGACTCCTTACACAGCTCTC
CCATCCTTTCATCCTCCCCCTGCACTTCGCCTTTCAAACGCCCGAAAAGC
TTTATTTGATTACTGAATACTGCCAAGGGGGAGAACTATATTTCCACCTT
CGGAAACACCGAACGTTCTCCCTGGAACTGACCAGGTTCTATGCGAGCGA
ATTATGCGCCGTCCTTTCGTACTTAAACAAGAAGAAGATCATCTTTCGAG
ATTTGAAGCCGGAAAATATCTTGATGGACAAACGTGGGCACATCAAGCTT
GTGGACTTCGGGCTAGCAAAGGGAGGAATGGAGGGAGACAGCTTAACGAA
GACATTCTGCGGGACACCTGAGTACTTGGCGCCGGAGATGGTGTTGAATC
GACGGTACGTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCC
TCCTCCTCGTCTAACGTTTCATTTCCATTGGGAAAAAATATCCGTCGTCC
GCAGGACCCGCGCAGGGTACACAGGTGCAGTGGACTGGTGGGGCCTGGGG
GTCGTCTGCTTCGAGATGCTGTTCGGCTTCCCGCCTTTTCACGACCGAGA
TTTCCATAAAATGTGCAGCAATATTTTGAAGAAACCTCTGCGTTTTCCGT
GGTTGCCGTCGGTTGGCAAAGTGGAAAGAGGAAGGGAAGAAGGGAGGAGG
AAGCTCCCGCCGGAGGCACGGGCGTTTTTGAAGGGGCTGTTGGACAGGAA
TCCGTCCCGACGGTTGGGATTCATCAACCGTCCCGCGATTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTGCTCCTGTTTCTCCTGCCCTTCCTTCTCCC
CCCAAAACCCATAAAGACAACCACAAAATGGACATCAAAGCTCACCCTTT
CTTCCACGGCATAGACTGGGAGATGCTCGAAAGCGGTGAAATCCCTCCAC
CACAATTGCTACCACAGGAAGACAAGAAAGTGGAAGACGTAAGGTACGAT
TCCCATTTCATTCAATTTATTTTATTGTGTATATTTTGTATCTCATCATG
TGAATGA back to topCoding sequence (CDS) from alignment at scaffold_45:36234..37890- >mRNA_9849 ID=mRNA_9849|Name=jgi.p|Nanoce1779_2|533759|organism=Nannochloropsis oceanica|type=CDS|length=5850bp|location=Sequence derived from alignment at scaffold_45:36234..37890- (Nannochloropsis oceanica)
ACAACCACAAAATGGACATCAAAGCTCACCCTTTCTTCCACGGCATAGAC
TGGGAGATGCTCGAAAGCGGTGAAATCCCTCCACCACAATTGCTACCACA
GGAAGACAAGAAAGTGGAAGACGTAAGGTACGATTCCCATTTCATTCAAT
TTATTTTATTGTGTATATTTTGTATCTCATCATGTGAATGAGAAGCTCCC
GCCGGAGGCACGGGCGTTTTTGAAGGGGCTGTTGGACAGGAATCCGTCCC
GACGGTTGGGATTCATCAACCGACCCGCGCAGGGTACACAGGTGCAGTGG
ACTGGTGGGGCCTGGGGGTCGTCTGCTTCGAGATGCTGTTCGGCTTCCCG
CCTTTTCACGACCGAGATTTCCATAAAATGTGCAGCAATATTTTGAAGAA
ACCTCTGCGTTTTCCGTGGGAAGGCCTTTCCCCCTTCCCTTCCTCCTCCT
CCTCCATGCAGCCACGCAATCACTGAGCGGAGACTCCTTACACAGCTCTC
CCATCCTTTCATCCTCCCCCTGCACTTCGCCTTTCAAACGCCCGAAAAGC
TTTATTTGATTACTGAATACTGCCAAGGGGGAGAACTATATTTCCACCTT
CGGAAACACCGAACGTTCTCCCTGGAACTGACCAGGTTCTATGCGAGCGA
ATTATGCGCCGTCCTTTCGTACTTAAACAAGAAGAAGATCATCTTTCGAG
ATTTGAAGCCGGAAAATATCTTGATGGACAAACGTGGGCACATCAAGCTT
GTGGACTTCGGGCTAGCAAAGGGAGGAATGGAGGGAGACAGCTTAACGAA
GACATTCTGCGGGACACCTGAGTACTTGGCGCCGGAGATGGTATGGGAAG
GTATTTTGACTTGACGCCGACGGCAGGAGGAGGGAGGGAAGGAGGAGGAG
AGGGAGGGGGAAATCGAACCTTGTCCAAGTGGATAAAACCTCTCTTCTCC
CTCCCCTTCCTTCCTTCCTTCCTCCCTCCCTTTACCAAATCCTCCCCCCC
CTCTTGGCTCTACCCTTCCCTTTACCCACGGCTGCGGCTTCCGACCCTTT
CTCCTTCCCTGTCTCCTCCCGTATGCTTGCGAGATTTCGAATTGCTGCGT
GTGATTGGTCAAGGATCTTTTGGTCGTGTGTTTTTGGTGAGACATACGAG
GCATCACGGGGGCGTCACCTACAACCACAAAATGGACATCAAAGCTCACC
CTTTCTTCCACGGCATAGACTGGGAGATGCTCGAAAGCGGTGAAATCCCT
CCACCACAATTGCTACCACAGGAAGACAAGAAAGTGGAAGACGTAAGGTA
CGATTCCCATTTCATTCAATTTATTTTATTGTGTATATTTTGTATCTCAT
CATGTGAATGAGAAGCTCCCGCCGGAGGCACGGGCGTTTTTGAAGGGGCT
GTTGGACAGGAATCCGTCCCGACGGTTGGGATTCATCAACCGACCCGCGC
AGGGTACACAGGTGCAGTGGACTGGTGGGGCCTGGGGGTCGTCTGCTTCG
AGATGCTGTTCGGCTTCCCGCCTTTTCACGACCGAGATTTCCATAAAATG
TGCAGCAATATTTTGAAGAAACCTCTGCGTTTTCCGTGGGAAGGCCTTTC
CCCCTTCCCTTCCTCCTCCTCCTCCATGCAGCCACGCAATCACTGAGCGG
AGACTCCTTACACAGCTCTCCCATCCTTTCATCCTCCCCCTGCACTTCGC
CTTTCAAACGCCCGAAAAGCTTTATTTGATTACTGAATACTGCCAAGGGG
GAGAACTATATTTCCACCTTCGGAAACACCGAACGTTCTCCCTGGAACTG
ACCAGGTTCTATGCGAGCGAATTATGCGCCGTCCTTTCGTACTTAAACAA
GAAGAAGATCATCTTTCGAGATTTGAAGCCGGAAAATATCTTGATGGACA
AACGTGGGCACATCAAGCTTGTGGACTTCGGGCTAGCAAAGGGAGGAATG
GAGGGAGACAGCTTAACGAAGACATTCTGCGGGACACCTGAGTACTTGGC
GCCGGAGATGGTATGGGAAGGTATTTTGACTTGACGCCGACGGCAGGAGG
AGGGAGGGAAGGAGGAGGAGAGGGAGGGGGAAATCGAACCTTGTCCAAGT
GGATAAAACCTCTCTTCTCCCTCCCCTTCCTTCCTTCCTTCCTCCCTCCC
TTTACCAAATCCTCCCCCCCCTCTTGGCTCTACCCTTCCCTTTACCCACG
GCTGCGGCTTCCGACCCTTTCTCCTTCCCTGTCTCCTCCCGTATGCTTGC
GAGATTTCGAATTGCTGCGTGTGATTGGTCAAGGATCTTTTGGTCGTGTG
TTTTTGGTGAGACATACGAGGCATCACGGGGGCGTCACCTACAACCACAA
AATGGACATCAAAGCTCACCCTTTCTTCCACGGCATAGACTGGGAGATGC
TCGAAAGCGGTGAAATCCCTCCACCACAATTGCTACCACAGGAAGACAAG
AAAGTGGAAGACGTAAGGTACGATTCCCATTTCATTCAATTTATTTTATT
GTGTATATTTTGTATCTCATCATGTGAATGAGAAGCTCCCGCCGGAGGCA
CGGGCGTTTTTGAAGGGGCTGTTGGACAGGAATCCGTCCCGACGGTTGGG
ATTCATCAACCGACCCGCGCAGGGTACACAGGTGCAGTGGACTGGTGGGG
CCTGGGGGTCGTCTGCTTCGAGATGCTGTTCGGCTTCCCGCCTTTTCACG
ACCGAGATTTCCATAAAATGTGCAGCAATATTTTGAAGAAACCTCTGCGT
TTTCCGTGGGAAGGCCTTTCCCCCTTCCCTTCCTCCTCCTCCTCCATGCA
GCCACGCAATCACTGAGCGGAGACTCCTTACACAGCTCTCCCATCCTTTC
ATCCTCCCCCTGCACTTCGCCTTTCAAACGCCCGAAAAGCTTTATTTGAT
TACTGAATACTGCCAAGGGGGAGAACTATATTTCCACCTTCGGAAACACC
GAACGTTCTCCCTGGAACTGACCAGGTTCTATGCGAGCGAATTATGCGCC
GTCCTTTCGTACTTAAACAAGAAGAAGATCATCTTTCGAGATTTGAAGCC
GGAAAATATCTTGATGGACAAACGTGGGCACATCAAGCTTGTGGACTTCG
GGCTAGCAAAGGGAGGAATGGAGGGAGACAGCTTAACGAAGACATTCTGC
GGGACACCTGAGTACTTGGCGCCGGAGATGGTATGGGAAGGTATTTTGAC
TTGACGCCGACGGCAGGAGGAGGGAGGGAAGGAGGAGGAGAGGGAGGGGG
AAATCGAACCTTGTCCAAGTGGATAAAACCTCTCTTCTCCCTCCCCTTCC
TTCCTTCCTTCCTCCCTCCCTTTACCAAATCCTCCCCCCCCTCTTGGCTC
TACCCTTCCCTTTACCCACGGCTGCGGCTTCCGACCCTTTCTCCTTCCCT
GTCTCCTCCCGTATGCTTGCGAGATTTCGAATTGCTGCGTGTGATTGGTC
AAGGATCTTTTGGTCGTGTGTTTTTGGTGAGACATACGAGGCATCACGGG
GGCGTCACCTACAACCACAAAATGGACATCAAAGCTCACCCTTTCTTCCA
CGGCATAGACTGGGAGATGCTCGAAAGCGGTGAAATCCCTCCACCACAAT
TGCTACCACAGGAAGACAAGAAAGTGGAAGACGTAAGGTACGATTCCCAT
TTCATTCAATTTATTTTATTGTGTATATTTTGTATCTCATCATGTGAATG
AGAAGCTCCCGCCGGAGGCACGGGCGTTTTTGAAGGGGCTGTTGGACAGG
AATCCGTCCCGACGGTTGGGATTCATCAACCGACCCGCGCAGGGTACACA
GGTGCAGTGGACTGGTGGGGCCTGGGGGTCGTCTGCTTCGAGATGCTGTT
CGGCTTCCCGCCTTTTCACGACCGAGATTTCCATAAAATGTGCAGCAATA
TTTTGAAGAAACCTCTGCGTTTTCCGTGGGAAGGCCTTTCCCCCTTCCCT
TCCTCCTCCTCCTCCATGCAGCCACGCAATCACTGAGCGGAGACTCCTTA
CACAGCTCTCCCATCCTTTCATCCTCCCCCTGCACTTCGCCTTTCAAACG
CCCGAAAAGCTTTATTTGATTACTGAATACTGCCAAGGGGGAGAACTATA
TTTCCACCTTCGGAAACACCGAACGTTCTCCCTGGAACTGACCAGGTTCT
ATGCGAGCGAATTATGCGCCGTCCTTTCGTACTTAAACAAGAAGAAGATC
ATCTTTCGAGATTTGAAGCCGGAAAATATCTTGATGGACAAACGTGGGCA
CATCAAGCTTGTGGACTTCGGGCTAGCAAAGGGAGGAATGGAGGGAGACA
GCTTAACGAAGACATTCTGCGGGACACCTGAGTACTTGGCGCCGGAGATG
GTATGGGAAGGTATTTTGACTTGACGCCGACGGCAGGAGGAGGGAGGGAA
GGAGGAGGAGAGGGAGGGGGAAATCGAACCTTGTCCAAGTGGATAAAACC
TCTCTTCTCCCTCCCCTTCCTTCCTTCCTTCCTCCCTCCCTTTACCAAAT
CCTCCCCCCCCTCTTGGCTCTACCCTTCCCTTTACCCACGGCTGCGGCTT
CCGACCCTTTCTCCTTCCCTGTCTCCTCCCGTATGCTTGCGAGATTTCGA
ATTGCTGCGTGTGATTGGTCAAGGATCTTTTGGTCGTGTGTTTTTGGTGA
GACATACGAGGCATCACGGGGGCGTCACCTACAACCACAAAATGGACATC
AAAGCTCACCCTTTCTTCCACGGCATAGACTGGGAGATGCTCGAAAGCGG
TGAAATCCCTCCACCACAATTGCTACCACAGGAAGACAAGAAAGTGGAAG
ACGTAAGGTACGATTCCCATTTCATTCAATTTATTTTATTGTGTATATTT
TGTATCTCATCATGTGAATGAGAAGCTCCCGCCGGAGGCACGGGCGTTTT
TGAAGGGGCTGTTGGACAGGAATCCGTCCCGACGGTTGGGATTCATCAAC
CGACCCGCGCAGGGTACACAGGTGCAGTGGACTGGTGGGGCCTGGGGGTC
GTCTGCTTCGAGATGCTGTTCGGCTTCCCGCCTTTTCACGACCGAGATTT
CCATAAAATGTGCAGCAATATTTTGAAGAAACCTCTGCGTTTTCCGTGGG
AAGGCCTTTCCCCCTTCCCTTCCTCCTCCTCCTCCATGCAGCCACGCAAT
CACTGAGCGGAGACTCCTTACACAGCTCTCCCATCCTTTCATCCTCCCCC
TGCACTTCGCCTTTCAAACGCCCGAAAAGCTTTATTTGATTACTGAATAC
TGCCAAGGGGGAGAACTATATTTCCACCTTCGGAAACACCGAACGTTCTC
CCTGGAACTGACCAGGTTCTATGCGAGCGAATTATGCGCCGTCCTTTCGT
ACTTAAACAAGAAGAAGATCATCTTTCGAGATTTGAAGCCGGAAAATATC
TTGATGGACAAACGTGGGCACATCAAGCTTGTGGACTTCGGGCTAGCAAA
GGGAGGAATGGAGGGAGACAGCTTAACGAAGACATTCTGCGGGACACCTG
AGTACTTGGCGCCGGAGATGGTATGGGAAGGTATTTTGACTTGACGCCGA
CGGCAGGAGGAGGGAGGGAAGGAGGAGGAGAGGGAGGGGGAAATCGAACC
TTGTCCAAGTGGATAAAACCTCTCTTCTCCCTCCCCTTCCTTCCTTCCTT
CCTCCCTCCCTTTACCAAATCCTCCCCCCCCTCTTGGCTCTACCCTTCCC
TTTACCCACGGCTGCGGCTTCCGACCCTTTCTCCTTCCCTGTCTCCTCCC
GTATGCTTGCGAGATTTCGAATTGCTGCGTGTGATTGGTCAAGGATCTTT
TGGTCGTGTGTTTTTGGTGAGACATACGAGGCATCACGGGGGCGTCACCT back to top
|