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Properties
| Property Name | Value |
|---|
| TranscriptId | 583929 |
| Track | FilteredModels2 |
| ProteinId | 583843 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:270386..271684 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2928 ID=mRNA_2928|Name=jgi.p|Nanoce1779_2|583843|organism=Nannochloropsis oceanica|type=mRNA|length=1081bp
ACAGGCCAATGGCGGGAGGAGAGCTTGGGGCTCAGCAGCTCCCGCAGCGG
CGGCGGGTTGTAGACTTTGTGCGGTTGTTGAATGCAACGGAGACGACGTT
GCAGCAGGGCGTCTTAGCGAGCACCCGGCCAGATGAGAGGGTCTACTTGT
TGGAGCTGAATCGTCAGCATGTGGTACGTTTGACATGCGTGAAGAGAGTT
TGTGTGCTATCGCTCAACTCGTTTTACGATCCTACCCTTTGCTCCAGTTC
TTAAAGGCCTTGCGGGAGCAACTCACGGAGCTGCACAGCCTGGACCTGGG
CGTGGTATTGGCGCCCAAGACATTGCAGGGTTACAGCTTTCGCGTGGACG
CCCTGGAACGCATTCTCTCGGCACGAAAGCAGGAATTGCGGCGGTTCAAG
GCCATGGAAGGGAGTCGACCCACCGGTAGCGGCATCAGCACCAGCACCAG
CACCAACGTGACTAGCAGTGCAAGGGGCAGCACTCTCGCCGGAGCGGCTC
TTTCCGGCAACGCACCTCCAGCACCAGGCCCCATAGTTGGAAGCCCTCTT
CCTATCAGTATCCGTCCAGGGCTAAAACCACCACTTCCGTTCAGTAAAGT
AGGGAAAAGGGGAGGGGCAAAAGAAGCGGAGGGAATTGACCGTGACCTGC
AAGAAAAGGTGGACCGGGAAAAGGAGGCACAGCAAATGCTGACGGAGCAG
TTGGGAGAGCTGGTAGGTGCACTCAAGGCCAGTTCAATGCTCGTACATTC
GAATTTGAAGACGCAGAACAAGGTGCTGGACAACACGGAGGACGCGGCCC
AACGGAATTTGGACGGCTTGCAGGTGGAGTTGAAGAAAACCGAAGAGCAG
CTGAAGAAAAGCTGGAGCAATTCTTTAACGTCGTTCTTCATGATCTTCAT
GATGCTTGCCATCTTTTTCGTTACATTTTTGTTCATGCGGGTTTTTCCAA
AGCGACGGTGGATGTTGTGGTGAAGATATGAGAGATGGCACGGAGCACTG
ATTTATTAGACCAGCCGGGACATCAAAGCACCCTCTCTTAAGAGGAGACA
AAGAAAAGTAAGAAAGAGACGCATGTACATA back to topprotein sequence of jgi.p|Nanoce1779_2|583843 >mRNA_2928-protein ID=mRNA_2928-protein|Name=jgi.p|Nanoce1779_2|583843|organism=Nannochloropsis oceanica|type=polypeptide|length=263bp
MREESLCAIAQLVLRSYPLLQFLKALREQLTELHSLDLGVVLAPKTLQGY
SFRVDALERILSARKQELRRFKAMEGSRPTGSGISTSTSTNVTSSARGST
LAGAALSGNAPPAPGPIVGSPLPISIRPGLKPPLPFSKVGKRGGAKEAEG
IDRDLQEKVDREKEAQQMLTEQLGELVGALKASSMLVHSNLKTQNKVLDN
TEDAAQRNLDGLQVELKKTEEQLKKSWSNSLTSFFMIFMMLAIFFVTFLF
MRVFPKRRWMLW* back to topmRNA from alignment at scaffold_7:270386..271684- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2928 ID=mRNA_2928|Name=jgi.p|Nanoce1779_2|583843|organism=Nannochloropsis oceanica|type=mRNA|length=1299bp|location=Sequence derived from alignment at scaffold_7:270386..271684- (Nannochloropsis oceanica)
ACAGGCCAATGGCGGGAGGAGAGCTTGGGGCTCAGCAGCTCCCGCAGCGG
CGGCGGGTTGTAGACTTTGTGCGGTTGTTGAATGCAACGGAGACGACGTT
GCAGCAGGGCGTCTTAGCGAGCACCCGGCCAGATGAGAGGGTCTACTTGT
TGGAGCTGAATCGTCAGCATGTGGTACGTTTGACATGCGTGAAGAGAGTT
TGTGTGCTATCGCTCAACTCGTTTTACGATCCTACCCTTTGCTCCAGTTC
TTAAAGGCCTTGCGGGAGCAACTCACGGAGCTGCACAGCCTGGACCTGGG
CGTGGTATTGGCGCCCAAGACATTGCAGGGTTACAGCTTTCGCGTGGACG
CCCTGGAACGCATTCTCTCGGCACGAAAGCAGGAATTGCGGCGGTTCAAG
GCCATGGAAGGGAGTCGACCCACCGGTAGCGGCATCAGCACCAGCACCAG
CACCAACGTGACTAGCAGTGCAAGGGGCAGCACTCTCGCCGGAGCGGCTC
TTTCCGGCAACGCACCTCCAGCACCAGGCCCCATAGTTGGAAGCCCTCTT
CCTATCAGTATCCGTCCAGGGCTAAAACCACCACTTCCGTTCAGTAAAGT
AGGGAAAAGGGGAGGGGCAAAAGAAGCGGAGGGAATTGACCGTGACCTGC
AAGAAAAGGTGGACCGGGAAAAGGAGGCACAGCAAATGCTGACGGAGCAG
TTGGGAGAGCTGGTAGGTGCACTCAAGGCCAGTTCAATGCTCGTACATTC
GAATTTGAAGACGCAGAACAAGGTAGGTTTCAATTTCTTGTGCAATATAA
GGAAAGGGGATTGGCTTTTTACTAGGACGAGGATGCCTTTTGCCCTTGGG
TCACAGACTATGTGGATGAGAGCATGGAGAATGGGAAGAAATTTTGAATG
AGGCGCTGACAAGCAAGATTTCATAAAACTTAACTTGTATCCGAATTGGC
TCATGTTGCATCCCTACCTTATTTTTCCCCGGCACGGTAGGTGCTGGACA
ACACGGAGGACGCGGCCCAACGGAATTTGGACGGCTTGCAGGTGGAGTTG
AAGAAAACCGAAGAGCAGCTGAAGAAAAGCTGGAGCAATTCTTTAACGTC
GTTCTTCATGATCTTCATGATGCTTGCCATCTTTTTCGTTACATTTTTGT
TCATGCGGGTTTTTCCAAAGCGACGGTGGATGTTGTGGTGAAGATATGAG
AGATGGCACGGAGCACTGATTTATTAGACCAGCCGGGACATCAAAGCACC
CTCTCTTAAGAGGAGACAAAGAAAAGTAAGAAAGAGACGCATGTACATA back to topCoding sequence (CDS) from alignment at scaffold_7:270386..271684- >mRNA_2928 ID=mRNA_2928|Name=jgi.p|Nanoce1779_2|583843|organism=Nannochloropsis oceanica|type=CDS|length=1578bp|location=Sequence derived from alignment at scaffold_7:270386..271684- (Nannochloropsis oceanica)
GTGCTGGACAACACGGAGGACGCGGCCCAACGGAATTTGGACGGCTTGCA
GGTGGAGTTGAAGAAAACCGAAGAGCAGCTGAAGAAAAGCTGGAGCAATT
CTTTAACGTCGTTCTTCATGATCTTCATGATGCTTGCCATCTTTTTCGTT
ACATTTTTGTTCATGCGGGTTTTTCCAAAGCGACGGTGGATGTTGTGGTG
AATGCGTGAAGAGAGTTTGTGTGCTATCGCTCAACTCGTTTTACGATCCT
ACCCTTTGCTCCAGTTCTTAAAGGCCTTGCGGGAGCAACTCACGGAGCTG
CACAGCCTGGACCTGGGCGTGGTATTGGCGCCCAAGACATTGCAGGGTTA
CAGCTTTCGCGTGGACGCCCTGGAACGCATTCTCTCGGCACGAAAGCAGG
AATTGCGGCGGTTCAAGGCCATGGAAGGGAGTCGACCCACCGGTAGCGGC
ATCAGCACCAGCACCAGCACCAACGTGACTAGCAGTGCAAGGGGCAGCAC
TCTCGCCGGAGCGGCTCTTTCCGGCAACGCACCTCCAGCACCAGGCCCCA
TAGTTGGAAGCCCTCTTCCTATCAGTATCCGTCCAGGGCTAAAACCACCA
CTTCCGTTCAGTAAAGTAGGGAAAAGGGGAGGGGCAAAAGAAGCGGAGGG
AATTGACCGTGACCTGCAAGAAAAGGTGGACCGGGAAAAGGAGGCACAGC
AAATGCTGACGGAGCAGTTGGGAGAGCTGGTAGGTGCACTCAAGGCCAGT
TCAATGCTCGTACATTCGAATTTGAAGACGCAGAACAAGGTGCTGGACAA
CACGGAGGACGCGGCCCAACGGAATTTGGACGGCTTGCAGGTGGAGTTGA
AGAAAACCGAAGAGCAGCTGAAGAAAAGCTGGAGCAATTCTTTAACGTCG
TTCTTCATGATCTTCATGATGCTTGCCATCTTTTTCGTTACATTTTTGTT
CATGCGGGTTTTTCCAAAGCGACGGTGGATGTTGTGGTGAATGCGTGAAG
AGAGTTTGTGTGCTATCGCTCAACTCGTTTTACGATCCTACCCTTTGCTC
CAGTTCTTAAAGGCCTTGCGGGAGCAACTCACGGAGCTGCACAGCCTGGA
CCTGGGCGTGGTATTGGCGCCCAAGACATTGCAGGGTTACAGCTTTCGCG
TGGACGCCCTGGAACGCATTCTCTCGGCACGAAAGCAGGAATTGCGGCGG
TTCAAGGCCATGGAAGGGAGTCGACCCACCGGTAGCGGCATCAGCACCAG
CACCAGCACCAACGTGACTAGCAGTGCAAGGGGCAGCACTCTCGCCGGAG
CGGCTCTTTCCGGCAACGCACCTCCAGCACCAGGCCCCATAGTTGGAAGC
CCTCTTCCTATCAGTATCCGTCCAGGGCTAAAACCACCACTTCCGTTCAG
TAAAGTAGGGAAAAGGGGAGGGGCAAAAGAAGCGGAGGGAATTGACCGTG
ACCTGCAAGAAAAGGTGGACCGGGAAAAGGAGGCACAGCAAATGCTGACG
GAGCAGTTGGGAGAGCTGGTAGGTGCACTCAAGGCCAGTTCAATGCTCGT
ACATTCGAATTTGAAGACGCAGAACAAG back to top
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