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Properties
| Property Name | Value |
|---|
| TranscriptId | 595851 |
| Track | FilteredModels2 |
| ProteinId | 595765 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:395990..398645 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7146 ID=mRNA_7146|Name=jgi.p|Nanoce1779_2|595765|organism=Nannochloropsis oceanica|type=mRNA|length=1449bp
AGAACCGCAGGGAAAGTAAGCCGGGACCCGGCAAAGCTTTGTGGGAGAAG
GCCCATCATCGTAACCCTTCCAAGGGCGTCCAGGGTTCTTGATTTCCTCA
CGGGTCATCGCTCGTGTACCATGCCCTTCTCATGCTGTTGCCTGCAGTGT
GTGGACACTTCAACTATGGGCATTCAAGAACGCTTCGGTAATTTTGTCGG
CATTTTGCCTCCGGGACTGAATTGCATCATGTGGCCGATCGACAACGTGG
TGGGCCGTGTGAGTGCGCGGGTCCAGCAGCTGGTTTGTGACTGCGGCACC
AAGACCAAGGATAATGTCTTTGTATCCGTGCAAGTGATCGTCCAGTACCA
AGTTATTGTCACGCAAGCCTACGATGCTTACTATAAGCTCACTGATCCCA
ACCTCCAAATTCGCTCGTACGTAGAGGACATCGTGCGCTCCACTGTGCCA
AGGATGGAGTTGGACTCGGCATTTGAGGCGAAAGAAGAGCTTGCGCACGC
CATCCGCGACTCGCTGCAGCAAACCATGGGGACGTACGGGTACACCATCA
TCCAGAGCCTGGTGGTGGACATTCGGGTGGACGAGAAGGTCAAGACGGCC
ATGAATGAGATTAACGCTGCTAAGCGTTTGAGGGAGGCGGCGGCCGAGAA
GGCAGAGGCGGATAAAATCGTGCAGGTCAAGGCCGCGGAAGCCTCTGCCG
AGAGCAAATACCTCTCGGGGATGGGCATCGCGCGGGAGAGGAAGGCGATC
GTGGATGGCCTACGGGGAAGCGTGGAGGAGTTCTCGGAGGTGGTGGATGG
AGCCACGCCGAAGGATGTGATGGATTTAATTTTGCTGACGCAGTACTTCG
ATATGCTCAAGGACGTGGGCAGTAATCCCAGTGCCACCACCCTCTTTATG
AACCACGGCCCCAGTGCCGTCACGGAGCTCAAGGAGCAGTTGAAGGAAGG
CATCATGACCAAGGCCACAACTGCTTCTTCTTGAGACAAACTAAGGAAAA
AGTATTCGAAAATGCCGCATGAACATTTTTTTGAATTTCGAATGGGGGGA
GGCGAGGCCCGTGACGCGTGCGTAGACAGGGTGCACCCCGACAGGACAAA
AAGTGGAAAGGGAAGATGAAAATGCATGTCACCGGCAGAGTGTGTAAGCG
TATGGCCCTCGTTGCCACACTATTTATTTCCTTTCGCATTCTTTCAATCT
CTGTACAAAGTTCCTTTGATTTTCACCATCTCCATCCCTTCATTCACAGC
TCCCCCTCCCGCTACCACCACCATTGACACCGTGATAAATAAAACCTGCC
ACGCGCTGATCTTCGTCGGCATGATACATTATTTACCAGCTTATCCACAC
TTTTCGCTCCTTGTCTCCCACTTCCCTCCCTCCTTCCCTTCTTCAGCTCC
CTCCCTCCCTCCTTCCGCTTTCTCCCTCCCTTACAGCCCAATGGTACGA back to topprotein sequence of jgi.p|Nanoce1779_2|595765 >mRNA_7146-protein ID=mRNA_7146-protein|Name=jgi.p|Nanoce1779_2|595765|organism=Nannochloropsis oceanica|type=polypeptide|length=288bp
MPFSCCCLQCVDTSTMGIQERFGNFVGILPPGLNCIMWPIDNVVGRVSAR
VQQLVCDCGTKTKDNVFVSVQVIVQYQVIVTQAYDAYYKLTDPNLQIRSY
VEDIVRSTVPRMELDSAFEAKEELAHAIRDSLQQTMGTYGYTIIQSLVVD
IRVDEKVKTAMNEINAAKRLREAAAEKAEADKIVQVKAAEASAESKYLSG
MGIARERKAIVDGLRGSVEEFSEVVDGATPKDVMDLILLTQYFDMLKDVG
SNPSATTLFMNHGPSAVTELKEQLKEGIMTKATTASS* back to topmRNA from alignment at scaffold_16:395990..398645- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7146 ID=mRNA_7146|Name=jgi.p|Nanoce1779_2|595765|organism=Nannochloropsis oceanica|type=mRNA|length=2656bp|location=Sequence derived from alignment at scaffold_16:395990..398645- (Nannochloropsis oceanica)
AGAACCGCAGGGAAAGTAAGCCGGGACCCGGCAAAGCTTTGTGGGAGAAG
GCCCATCATCGTAACCCTTCCAAGGGCGTCCAGGGTTCTTGATTTCCTCA
CGGGTCATCGCTCGTGTACCATGCCCTTCTCATGCTGTTGCCTGCAGTGT
GTGGACACTTCAACTATGGGCATTCAAGAACGCTTCGGTAATTTTGTCGG
GTGAGTATAGTGCTCATATCTGTCAGTGGGCGGCCTTGGGGAGGTCTTGT
CGCGACTAGGCTGGCAACGTGTGTGTGTGGACTGGGAACAGCAGTGAAAC
GTACCGCCCACTATCCATTTGAATGTTGATGCTTTGTTGCGCTGCAGGCA
GTATTTTTTCCCGACACAAATGTAAGCGTGAGGGGATTAAACAGGGGAGA
TGAGAGAGCGTGGCGCGAGTACCTTGAATCCTTGCGTATATGCCCTGTCA
TGTCCTGGTCTTTGAATCAACCATTTTCTCATACATCTCGCACTCGTCCT
AAACAATACTATTCTGAACAGCATTTTGCCTCCGGGACTGAATTGCATCA
TGTGGCCGATCGACAACGTGGTGGGCCGTGTGAGTGCGCGGGTCCAGCAG
CTGGTTTGTGACTGCGGCACCAAGACCAAGGATAATGTCTTTGTATCCGT
GCAAGTGATCGTCCAGTACCAAGTTATTGTCACGCAAGCCTACGATGCTT
ACTATAAGCTCACTGATCCCAACCTCCAAATTCGCTCGTAAGTATCCCCT
GTCTCTTTCTGTCCCTCTGTGTACTTCTGTCTTTGTGTCTTTCTATCTCG
GGTTGTGTGGGTGTGGGTGTGGGTGTGTGTGTGTGGGTGTGTGTGTGTGT
GTATGTGTGTATGTACGTACGTATGTATGTATGTGTGTGTGTCGCTCTCT
CTCCTTCTTTTTCTTTTTCCCCCTCTTTTTCCTTCTCTCTCTATCTCATT
CATTCCTTTTCCCCTCTGTCCGTTTTCACCCACGCCCACGCCATCACATC
TCAACTCGACATCTCTTTCACATTAAATTCTCTCTTCCCACTCCTGTTAT
GTAGGTACGTAGAGGACATCGTGCGCTCCACTGTGCCAAGGATGGAGTTG
GACTCGGCATTTGAGGCGAAAGAAGAGCTTGCGCACGCCATCCGCGACTC
GCTGCAGCAAACCATGGGGACGTACGGGTAAGTCAGCACTGAGTGCGTTT
GTGTTCTTCCTTTTTCCGTCGGCCATGCGACAAAGCAGCTTTCTGGACAT
GAAGTGAGCAGATTTCCGGGTAGCTGACTTCTCTCTTCCAGTTTCTACTG
TGCCCCTTAGGAGCTGCAGATAAGGACGACTGGCAATCACCACACCACTC
ACCTATGCATTCAAACCCTCCAGGTACACCATCATCCAGAGCCTGGTGGT
GGACATTCGGGTGGACGAGAAGGTCAAGACGGCCATGAATGAGATTAACG
CTGCTAAGCGTTTGAGGGAGGTAAGTGGGAAGAGAACACCCCACGTCCTC
CACTTGTCTCTTCCGACGACTGTGTCCGTTCTGTCAGCCGTTTAGACCAT
TCTCCAAAGACTCATGTCATGACCAACCCTCCCTCTATAACAGGCGGCGG
CCGAGAAGGCAGAGGCGGATAAAATCGTGCAGGTCAAGGCCGCGGAAGCC
TCTGCCGAGAGCAAATACCTCTCGGGGATGGGCATCGCGCGGGAGAGGAA
GGCGATCGTGGATGGCCTACGGGGAAGCGTGGAGGAGTTCTCGGAGGTGG
TGGATGGAGCCACGCCGAAGGATGTGATGGATTTAATTTTGCTGACGCAG
TACTTCGATATGCTCAAGGTATGCTAGTGGGCTGGGAGGGGAGAGGATGG
GGTCGAGGACGGACGAATTAAGCGTGTCCTGCATGCGTCGGTCCCTATAT
TTCACCACCTCCTTTTTGTGTATGTGGTGTTACTTTTCATCGAGGCTATC
ACGCACAGTCTTCTAGGCTCCCTTGCTGGCTTGGCCCTTGCGATGCGACA
TCTTTTTGTAAAGCCCGCATACGCATATCTTACTCCCTCCTCCTTTCCGC
CATTGCACACACATACAGGACGTGGGCAGTAATCCCAGTGCCACCACCCT
CTTTATGAACCACGGCCCCAGTGCCGTCACGGAGCTCAAGGAGCAGTTGA
AGGAAGGCATCATGACCAAGGCCACAACTGCTTCTTCTTGAGACAAACTA
AGGAAAAAGTATTCGAAAATGCCGCATGAACATTTTTTTGAATTTCGAAT
GGGGGGAGGCGAGGCCCGTGACGCGTGCGTAGACAGGGTGCACCCCGACA
GGACAAAAAGTGGAAAGGGAAGATGAAAATGCATGTCACCGGCAGAGTGT
GTAAGCGTATGGCCCTCGTTGCCACACTATTTATTTCCTTTCGCATTCTT
TCAATCTCTGTACAAAGTTCCTTTGATTTTCACCATCTCCATCCCTTCAT
TCACAGCTCCCCCTCCCGCTACCACCACCATTGACACCGTGATAAATAAA
ACCTGCCACGCGCTGATCTTCGTCGGCATGATACATTATTTACCAGCTTA
TCCACACTTTTCGCTCCTTGTCTCCCACTTCCCTCCCTCCTTCCCTTCTT
CAGCTCCCTCCCTCCCTCCTTCCGCTTTCTCCCTCCCTTACAGCCCAATG
GTACGA back to topCoding sequence (CDS) from alignment at scaffold_16:395990..398645- >mRNA_7146 ID=mRNA_7146|Name=jgi.p|Nanoce1779_2|595765|organism=Nannochloropsis oceanica|type=CDS|length=5184bp|location=Sequence derived from alignment at scaffold_16:395990..398645- (Nannochloropsis oceanica)
GACGTGGGCAGTAATCCCAGTGCCACCACCCTCTTTATGAACCACGGCCC
CAGTGCCGTCACGGAGCTCAAGGAGCAGTTGAAGGAAGGCATCATGACCA
AGGCCACAACTGCTTCTTCTTGAGCGGCGGCCGAGAAGGCAGAGGCGGAT
AAAATCGTGCAGGTCAAGGCCGCGGAAGCCTCTGCCGAGAGCAAATACCT
CTCGGGGATGGGCATCGCGCGGGAGAGGAAGGCGATCGTGGATGGCCTAC
GGGGAAGCGTGGAGGAGTTCTCGGAGGTGGTGGATGGAGCCACGCCGAAG
GATGTGATGGATTTAATTTTGCTGACGCAGTACTTCGATATGCTCAAGGT
ACACCATCATCCAGAGCCTGGTGGTGGACATTCGGGTGGACGAGAAGGTC
AAGACGGCCATGAATGAGATTAACGCTGCTAAGCGTTTGAGGGAGGTACG
TAGAGGACATCGTGCGCTCCACTGTGCCAAGGATGGAGTTGGACTCGGCA
TTTGAGGCGAAAGAAGAGCTTGCGCACGCCATCCGCGACTCGCTGCAGCA
AACCATGGGGACGTACGGCATTTTGCCTCCGGGACTGAATTGCATCATGT
GGCCGATCGACAACGTGGTGGGCCGTGTGAGTGCGCGGGTCCAGCAGCTG
GTTTGTGACTGCGGCACCAAGACCAAGGATAATGTCTTTGTATCCGTGCA
AGTGATCGTCCAGTACCAAGTTATTGTCACGCAAGCCTACGATGCTTACT
ATAAGCTCACTGATCCCAACCTCCAAATTCGCTCATGCCCTTCTCATGCT
GTTGCCTGCAGTGTGTGGACACTTCAACTATGGGCATTCAAGAACGCTTC
GGTAATTTTGTCGGGACGTGGGCAGTAATCCCAGTGCCACCACCCTCTTT
ATGAACCACGGCCCCAGTGCCGTCACGGAGCTCAAGGAGCAGTTGAAGGA
AGGCATCATGACCAAGGCCACAACTGCTTCTTCTTGAGCGGCGGCCGAGA
AGGCAGAGGCGGATAAAATCGTGCAGGTCAAGGCCGCGGAAGCCTCTGCC
GAGAGCAAATACCTCTCGGGGATGGGCATCGCGCGGGAGAGGAAGGCGAT
CGTGGATGGCCTACGGGGAAGCGTGGAGGAGTTCTCGGAGGTGGTGGATG
GAGCCACGCCGAAGGATGTGATGGATTTAATTTTGCTGACGCAGTACTTC
GATATGCTCAAGGTACACCATCATCCAGAGCCTGGTGGTGGACATTCGGG
TGGACGAGAAGGTCAAGACGGCCATGAATGAGATTAACGCTGCTAAGCGT
TTGAGGGAGGTACGTAGAGGACATCGTGCGCTCCACTGTGCCAAGGATGG
AGTTGGACTCGGCATTTGAGGCGAAAGAAGAGCTTGCGCACGCCATCCGC
GACTCGCTGCAGCAAACCATGGGGACGTACGGCATTTTGCCTCCGGGACT
GAATTGCATCATGTGGCCGATCGACAACGTGGTGGGCCGTGTGAGTGCGC
GGGTCCAGCAGCTGGTTTGTGACTGCGGCACCAAGACCAAGGATAATGTC
TTTGTATCCGTGCAAGTGATCGTCCAGTACCAAGTTATTGTCACGCAAGC
CTACGATGCTTACTATAAGCTCACTGATCCCAACCTCCAAATTCGCTCAT
GCCCTTCTCATGCTGTTGCCTGCAGTGTGTGGACACTTCAACTATGGGCA
TTCAAGAACGCTTCGGTAATTTTGTCGGGACGTGGGCAGTAATCCCAGTG
CCACCACCCTCTTTATGAACCACGGCCCCAGTGCCGTCACGGAGCTCAAG
GAGCAGTTGAAGGAAGGCATCATGACCAAGGCCACAACTGCTTCTTCTTG
AGCGGCGGCCGAGAAGGCAGAGGCGGATAAAATCGTGCAGGTCAAGGCCG
CGGAAGCCTCTGCCGAGAGCAAATACCTCTCGGGGATGGGCATCGCGCGG
GAGAGGAAGGCGATCGTGGATGGCCTACGGGGAAGCGTGGAGGAGTTCTC
GGAGGTGGTGGATGGAGCCACGCCGAAGGATGTGATGGATTTAATTTTGC
TGACGCAGTACTTCGATATGCTCAAGGTACACCATCATCCAGAGCCTGGT
GGTGGACATTCGGGTGGACGAGAAGGTCAAGACGGCCATGAATGAGATTA
ACGCTGCTAAGCGTTTGAGGGAGGTACGTAGAGGACATCGTGCGCTCCAC
TGTGCCAAGGATGGAGTTGGACTCGGCATTTGAGGCGAAAGAAGAGCTTG
CGCACGCCATCCGCGACTCGCTGCAGCAAACCATGGGGACGTACGGCATT
TTGCCTCCGGGACTGAATTGCATCATGTGGCCGATCGACAACGTGGTGGG
CCGTGTGAGTGCGCGGGTCCAGCAGCTGGTTTGTGACTGCGGCACCAAGA
CCAAGGATAATGTCTTTGTATCCGTGCAAGTGATCGTCCAGTACCAAGTT
ATTGTCACGCAAGCCTACGATGCTTACTATAAGCTCACTGATCCCAACCT
CCAAATTCGCTCATGCCCTTCTCATGCTGTTGCCTGCAGTGTGTGGACAC
TTCAACTATGGGCATTCAAGAACGCTTCGGTAATTTTGTCGGGACGTGGG
CAGTAATCCCAGTGCCACCACCCTCTTTATGAACCACGGCCCCAGTGCCG
TCACGGAGCTCAAGGAGCAGTTGAAGGAAGGCATCATGACCAAGGCCACA
ACTGCTTCTTCTTGAGCGGCGGCCGAGAAGGCAGAGGCGGATAAAATCGT
GCAGGTCAAGGCCGCGGAAGCCTCTGCCGAGAGCAAATACCTCTCGGGGA
TGGGCATCGCGCGGGAGAGGAAGGCGATCGTGGATGGCCTACGGGGAAGC
GTGGAGGAGTTCTCGGAGGTGGTGGATGGAGCCACGCCGAAGGATGTGAT
GGATTTAATTTTGCTGACGCAGTACTTCGATATGCTCAAGGTACACCATC
ATCCAGAGCCTGGTGGTGGACATTCGGGTGGACGAGAAGGTCAAGACGGC
CATGAATGAGATTAACGCTGCTAAGCGTTTGAGGGAGGTACGTAGAGGAC
ATCGTGCGCTCCACTGTGCCAAGGATGGAGTTGGACTCGGCATTTGAGGC
GAAAGAAGAGCTTGCGCACGCCATCCGCGACTCGCTGCAGCAAACCATGG
GGACGTACGGCATTTTGCCTCCGGGACTGAATTGCATCATGTGGCCGATC
GACAACGTGGTGGGCCGTGTGAGTGCGCGGGTCCAGCAGCTGGTTTGTGA
CTGCGGCACCAAGACCAAGGATAATGTCTTTGTATCCGTGCAAGTGATCG
TCCAGTACCAAGTTATTGTCACGCAAGCCTACGATGCTTACTATAAGCTC
ACTGATCCCAACCTCCAAATTCGCTCATGCCCTTCTCATGCTGTTGCCTG
CAGTGTGTGGACACTTCAACTATGGGCATTCAAGAACGCTTCGGTAATTT
TGTCGGGACGTGGGCAGTAATCCCAGTGCCACCACCCTCTTTATGAACCA
CGGCCCCAGTGCCGTCACGGAGCTCAAGGAGCAGTTGAAGGAAGGCATCA
TGACCAAGGCCACAACTGCTTCTTCTTGAGCGGCGGCCGAGAAGGCAGAG
GCGGATAAAATCGTGCAGGTCAAGGCCGCGGAAGCCTCTGCCGAGAGCAA
ATACCTCTCGGGGATGGGCATCGCGCGGGAGAGGAAGGCGATCGTGGATG
GCCTACGGGGAAGCGTGGAGGAGTTCTCGGAGGTGGTGGATGGAGCCACG
CCGAAGGATGTGATGGATTTAATTTTGCTGACGCAGTACTTCGATATGCT
CAAGGTACACCATCATCCAGAGCCTGGTGGTGGACATTCGGGTGGACGAG
AAGGTCAAGACGGCCATGAATGAGATTAACGCTGCTAAGCGTTTGAGGGA
GGTACGTAGAGGACATCGTGCGCTCCACTGTGCCAAGGATGGAGTTGGAC
TCGGCATTTGAGGCGAAAGAAGAGCTTGCGCACGCCATCCGCGACTCGCT
GCAGCAAACCATGGGGACGTACGGCATTTTGCCTCCGGGACTGAATTGCA
TCATGTGGCCGATCGACAACGTGGTGGGCCGTGTGAGTGCGCGGGTCCAG
CAGCTGGTTTGTGACTGCGGCACCAAGACCAAGGATAATGTCTTTGTATC
CGTGCAAGTGATCGTCCAGTACCAAGTTATTGTCACGCAAGCCTACGATG
CTTACTATAAGCTCACTGATCCCAACCTCCAAATTCGCTCATGCCCTTCT
CATGCTGTTGCCTGCAGTGTGTGGACACTTCAACTATGGGCATTCAAGAA
CGCTTCGGTAATTTTGTCGGGACGTGGGCAGTAATCCCAGTGCCACCACC
CTCTTTATGAACCACGGCCCCAGTGCCGTCACGGAGCTCAAGGAGCAGTT
GAAGGAAGGCATCATGACCAAGGCCACAACTGCTTCTTCTTGAGCGGCGG
CCGAGAAGGCAGAGGCGGATAAAATCGTGCAGGTCAAGGCCGCGGAAGCC
TCTGCCGAGAGCAAATACCTCTCGGGGATGGGCATCGCGCGGGAGAGGAA
GGCGATCGTGGATGGCCTACGGGGAAGCGTGGAGGAGTTCTCGGAGGTGG
TGGATGGAGCCACGCCGAAGGATGTGATGGATTTAATTTTGCTGACGCAG
TACTTCGATATGCTCAAGGTACACCATCATCCAGAGCCTGGTGGTGGACA
TTCGGGTGGACGAGAAGGTCAAGACGGCCATGAATGAGATTAACGCTGCT
AAGCGTTTGAGGGAGGTACGTAGAGGACATCGTGCGCTCCACTGTGCCAA
GGATGGAGTTGGACTCGGCATTTGAGGCGAAAGAAGAGCTTGCGCACGCC
ATCCGCGACTCGCTGCAGCAAACCATGGGGACGTACGGCATTTTGCCTCC
GGGACTGAATTGCATCATGTGGCCGATCGACAACGTGGTGGGCCGTGTGA
GTGCGCGGGTCCAGCAGCTGGTTTGTGACTGCGGCACCAAGACCAAGGAT
AATGTCTTTGTATCCGTGCAAGTGATCGTCCAGTACCAAGTTATTGTCAC
GCAAGCCTACGATGCTTACTATAAGCTCACTGATCCCAACCTCCAAATTC
GCTCATGCCCTTCTCATGCTGTTGCCTGCAGTGTGTGGACACTTCAACTA
TGGGCATTCAAGAACGCTTCGGTAATTTTGTCGG back to top
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