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Properties
Property Name | Value |
TranscriptId | 600094 |
Track | FilteredModels2 |
ProteinId | 600008 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_21 | supercontig | scaffold_21:317210..318722 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7782 ID=mRNA_7782|Name=jgi.p|Nanoce1779_2|600008|organism=Nannochloropsis oceanica|type=mRNA|length=1273bp ACAGGCCACGCCGAGGGTTTGTCTCTGTTTTTGTCTAGGGCGTTTAGGAG GGCTGGCCACGACGGCGTGCGCCGCTCAAAGAGGACGCCAGGCTGACCCA AGTTGGGAGGTGAAGTCCCGCGGCAGGTCACAAAGTGCATTTGGGGGACC ACGCGTGACAACCACCGATGCCAAAGCACACGACAACGATTCGGCAGCAT GAGCCGACGCGGCATGTCGATTCGGTCCCGAACGCTTTGTCGCTTTCTGG TAAGTGCCTCGATGTCGCCTCATGAAACCATCGTTTGAATGCGAAAGCCG AGAGCGCGGCAATCAAATCCAAAACATCGCTGCTCCCCATCCACTGCGGT TCCATTCAAGCACAAGCTACCTTTTTGTCATCCTTCTTCCATGCTAGGCC CATATCGATCCCTGTTGCGAAATCAAGATGTGATGTGTCAGCAGTTGGTG TCTTTGTCCTCCAACGCCCGCGCACCCATTCTTTCATCTCCCGCCTCACA TACATACACTCATCCGTTGTCTCCATTCCTTTCTCCATATAAATGCACAT TGAATTCAGATCCATATGGCACCCGAGCCATCATCCCCGTGGTGAGGGGC CGACCGCGCTTCCCACGTAGGCTGGCCTTACAGTTCGCAATGGACGAGGG AGACGAGGACAAGGAAGAGGAGGACAACGGCAGTTACGACAGCGCCGAGG AACGAGACCGGGAGGAGGAGGAGCAAGAGGATGAGAAAGTGGGCGCGGGC CTGGATGTCATGAGGTCAAGATGTGATCATCGAGTGACGTGCCGGGCGTT GGTGCTGCACCCTACAAAGTATAACCGCGATTTGTTTTTGCACAAGAACG ATGCCGCGGCTTTACGACGCCCGCGCCCTACAATGGAGACCTTGCCGCAG GACACGCTGAAGCAAATTTTCCGGTTCCTGCCTGCTCATTCTTTGTTGGC ATCAGAGATTGTCTGTAGGCTCTGGAGGGACTTGGCAAGCATGGATGATG CGCATTGGGAGCAACTTTGCAAACGGGCCTATGGGATTTCACCTGAAAAC TTTTCACCACCACCAGACCCCGTTAAGCTACTGTACATGCTCACGTACTC CTCGCTTTCTGAAATTAAGTATGGAGCGAACGGAGGAGGATCGGGCCGCA TGCAAGGAAGCTTGCGGTTTTTGTTTTGAGTGCTTTATTGATTGCCTGTG CGGCATAGTCATCGTTGATGAATGAGCGGGAGGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTG back to topprotein sequence of jgi.p|Nanoce1779_2|600008 >mRNA_7782-protein ID=mRNA_7782-protein|Name=jgi.p|Nanoce1779_2|600008|organism=Nannochloropsis oceanica|type=polypeptide|length=297bp MRKPRARQSNPKHRCSPSTAVPFKHKLPFCHPSSMLGPYRSLLRNQDVMC QQLVSLSSNARAPILSSPASHTYTHPLSPFLSPYKCTLNSDPYGTRAIIP VVRGRPRFPRRLALQFAMDEGDEDKEEEDNGSYDSAEERDREEEEQEDEK VGAGLDVMRSRCDHRVTCRALVLHPTKYNRDLFLHKNDAAALRRPRPTME TLPQDTLKQIFRFLPAHSLLASEIVCRLWRDLASMDDAHWEQLCKRAYGI SPENFSPPPDPVKLLYMLTYSSLSEIKYGANGGGSGRMQGSLRFLF* back to topmRNA from alignment at scaffold_21:317210..318722+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7782 ID=mRNA_7782|Name=jgi.p|Nanoce1779_2|600008|organism=Nannochloropsis oceanica|type=mRNA|length=1513bp|location=Sequence derived from alignment at scaffold_21:317210..318722+ (Nannochloropsis oceanica) ACAGGCCACGCCGAGGGTTTGTCTCTGTTTTTGTCTAGGGCGTTTAGGAG
GGCTGGCCACGACGGCGTGCGCCGCTCAAAGAGGACGCCAGGCTGACCCA
AGTTGGGAGGTGAAGTCCCGCGGCAGGTCACAAAGTGCATTTGGGGGACC
ACGCGTGACAACCACCGATGCCAAAGCACACGACAACGATTCGGCAGCAT
GAGCCGACGCGGCATGTCGATTCGGTCCCGAACGCTTTGTCGCTTTCTGG
TAAGTGCCTCGATGTCGCCTCATGAAACCATCGTTTGAATGCGAAAGCCG
AGAGCGCGGCAATCAAATCCAAAACATCGCTGCTCCCCATCCACTGCGGT
TCCATTCAAGCACAAGCTACCTTTTTGTCATCCTTCTTCCATGCTAGGCC
CATATCGATCCCTGTTGCGAAATCAAGATGTGATGTGTCAGCAGTTGGTG
TCTTTGTCCTCCAACGCCCGCGCACCCATTCTTTCATCTCCCGCCTCACA
TACATACACTCATCCGTTGTCTCCATTCCTTTCTCCATATAAATGCACAT
TGAATTCAGATCCATATGGCACCCGAGCCATCATCCCCGTGGTGAGGGGC
CGACCGCGCTTCCCACGTAGGCTGGCCTTACAGTTCGCAATGGACGAGGG
AGACGAGGACAAGGAAGAGGAGGACAACGGCAGTTACGACAGCGCCGAGG
AACGAGACCGGGAGGAGGAGGAGCAAGAGGATGAGAAAGTGGGCGCGGGC
CTGGATGTCATGAGGTCAAGATGTGATCATCGAGTGACGTGCCGGGCGTT
GGTGCTGCACCCTACAAAGTATAACCGCGATTTGTTTTTGCACAAGGTAG
GTAGTATATGTGCCCCCGGCCCCTCCTAGGCTCGTCTTTTCCGGTTCTCC
CGACATCAACACACACATGCATAAATATACCGGCACACAGTTTATAGTTG
TCCTTTTAATCACACACAAAACACCTACAGAACGATGCCGCGGCTTTACG
ACGCCCGCGCCCTACAATGGAGACCTTGCCGCAGGACACGCTGAAGCAAA
TTTTCCGGTTCCTGCCTGCTCATTCTTTGTTGGCATCAGAGATTGTCTGT
AGGCTCTGGAGGGACTTGGCAAGCATGGATGATGCGCATTGGGAGGTACG
GCATGAGGGAGGGAGAGAGCTGGCTGAATCGAAATTTCTGCGCCCATCCC
TCTGACGCTACCTCCCCCTATCTCTATACATTCCTCCCTATATTTCTTCA
GCAACTTTGCAAACGGGCCTATGGGATTTCACCTGAAAACTTTTCACCAC
CACCAGACCCCGTTAAGCTACTGTACATGCTCACGTACTCCTCGCTTTCT
GAAATTAAGTATGGAGCGAACGGAGGAGGATCGGGCCGCATGCAAGGAAG
CTTGCGGTTTTTGTTTTGAGTGCTTTATTGATTGCCTGTGCGGCATAGTC
ATCGTTGATGAATGAGCGGGAGGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTG back to topCoding sequence (CDS) from alignment at scaffold_21:317210..318722+ >mRNA_7782 ID=mRNA_7782|Name=jgi.p|Nanoce1779_2|600008|organism=Nannochloropsis oceanica|type=CDS|length=2673bp|location=Sequence derived from alignment at scaffold_21:317210..318722+ (Nannochloropsis oceanica) ATGCGAAAGCCGAGAGCGCGGCAATCAAATCCAAAACATCGCTGCTCCCC ATCCACTGCGGTTCCATTCAAGCACAAGCTACCTTTTTGTCATCCTTCTT CCATGCTAGGCCCATATCGATCCCTGTTGCGAAATCAAGATGTGATGTGT CAGCAGTTGGTGTCTTTGTCCTCCAACGCCCGCGCACCCATTCTTTCATC TCCCGCCTCACATACATACACTCATCCGTTGTCTCCATTCCTTTCTCCAT ATAAATGCACATTGAATTCAGATCCATATGGCACCCGAGCCATCATCCCC GTGGTGAGGGGCCGACCGCGCTTCCCACGTAGGCTGGCCTTACAGTTCGC AATGGACGAGGGAGACGAGGACAAGGAAGAGGAGGACAACGGCAGTTACG ACAGCGCCGAGGAACGAGACCGGGAGGAGGAGGAGCAAGAGGATGAGAAA GTGGGCGCGGGCCTGGATGTCATGAGGTCAAGATGTGATCATCGAGTGAC GTGCCGGGCGTTGGTGCTGCACCCTACAAAGTATAACCGCGATTTGTTTT TGCACAAGAACGATGCCGCGGCTTTACGACGCCCGCGCCCTACAATGGAG ACCTTGCCGCAGGACACGCTGAAGCAAATTTTCCGGTTCCTGCCTGCTCA TTCTTTGTTGGCATCAGAGATTGTCTGTAGGCTCTGGAGGGACTTGGCAA GCATGGATGATGCGCATTGGGAGCAACTTTGCAAACGGGCCTATGGGATT TCACCTGAAAACTTTTCACCACCACCAGACCCCGTTAAGCTACTGTACAT GCTCACGTACTCCTCGCTTTCTGAAATTAAGTATGGAGCGAACGGAGGAG GATCGGGCCGCATGCAAGGAAGCTTGCGGTTTTTGTTTTGAATGCGAAAG CCGAGAGCGCGGCAATCAAATCCAAAACATCGCTGCTCCCCATCCACTGC GGTTCCATTCAAGCACAAGCTACCTTTTTGTCATCCTTCTTCCATGCTAG GCCCATATCGATCCCTGTTGCGAAATCAAGATGTGATGTGTCAGCAGTTG GTGTCTTTGTCCTCCAACGCCCGCGCACCCATTCTTTCATCTCCCGCCTC ACATACATACACTCATCCGTTGTCTCCATTCCTTTCTCCATATAAATGCA CATTGAATTCAGATCCATATGGCACCCGAGCCATCATCCCCGTGGTGAGG GGCCGACCGCGCTTCCCACGTAGGCTGGCCTTACAGTTCGCAATGGACGA GGGAGACGAGGACAAGGAAGAGGAGGACAACGGCAGTTACGACAGCGCCG AGGAACGAGACCGGGAGGAGGAGGAGCAAGAGGATGAGAAAGTGGGCGCG GGCCTGGATGTCATGAGGTCAAGATGTGATCATCGAGTGACGTGCCGGGC GTTGGTGCTGCACCCTACAAAGTATAACCGCGATTTGTTTTTGCACAAGA ACGATGCCGCGGCTTTACGACGCCCGCGCCCTACAATGGAGACCTTGCCG CAGGACACGCTGAAGCAAATTTTCCGGTTCCTGCCTGCTCATTCTTTGTT GGCATCAGAGATTGTCTGTAGGCTCTGGAGGGACTTGGCAAGCATGGATG ATGCGCATTGGGAGCAACTTTGCAAACGGGCCTATGGGATTTCACCTGAA AACTTTTCACCACCACCAGACCCCGTTAAGCTACTGTACATGCTCACGTA CTCCTCGCTTTCTGAAATTAAGTATGGAGCGAACGGAGGAGGATCGGGCC GCATGCAAGGAAGCTTGCGGTTTTTGTTTTGAATGCGAAAGCCGAGAGCG CGGCAATCAAATCCAAAACATCGCTGCTCCCCATCCACTGCGGTTCCATT CAAGCACAAGCTACCTTTTTGTCATCCTTCTTCCATGCTAGGCCCATATC GATCCCTGTTGCGAAATCAAGATGTGATGTGTCAGCAGTTGGTGTCTTTG TCCTCCAACGCCCGCGCACCCATTCTTTCATCTCCCGCCTCACATACATA CACTCATCCGTTGTCTCCATTCCTTTCTCCATATAAATGCACATTGAATT CAGATCCATATGGCACCCGAGCCATCATCCCCGTGGTGAGGGGCCGACCG CGCTTCCCACGTAGGCTGGCCTTACAGTTCGCAATGGACGAGGGAGACGA GGACAAGGAAGAGGAGGACAACGGCAGTTACGACAGCGCCGAGGAACGAG ACCGGGAGGAGGAGGAGCAAGAGGATGAGAAAGTGGGCGCGGGCCTGGAT GTCATGAGGTCAAGATGTGATCATCGAGTGACGTGCCGGGCGTTGGTGCT GCACCCTACAAAGTATAACCGCGATTTGTTTTTGCACAAGAACGATGCCG CGGCTTTACGACGCCCGCGCCCTACAATGGAGACCTTGCCGCAGGACACG CTGAAGCAAATTTTCCGGTTCCTGCCTGCTCATTCTTTGTTGGCATCAGA GATTGTCTGTAGGCTCTGGAGGGACTTGGCAAGCATGGATGATGCGCATT GGGAGCAACTTTGCAAACGGGCCTATGGGATTTCACCTGAAAACTTTTCA CCACCACCAGACCCCGTTAAGCTACTGTACATGCTCACGTACTCCTCGCT TTCTGAAATTAAGTATGGAGCGAACGGAGGAGGATCGGGCCGCATGCAAG GAAGCTTGCGGTTTTTGTTTTGA back to top
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