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Properties
| Property Name | Value |
|---|
| TranscriptId | 601229 |
| Track | FilteredModels2 |
| ProteinId | 601143 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_23 | supercontig | scaffold_23:70385..73104 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8214 ID=mRNA_8214|Name=jgi.p|Nanoce1779_2|601143|organism=Nannochloropsis oceanica|type=mRNA|length=2274bp
ACAGACCACCAACACGCATACACCACACCAACCATGCGCGCTATCGCCTC
TCTGATGCTGCTATTGGCGCCCGTCGCCGTTTCCGCCTCCGCGGGGTCCT
CCCTCGCCCGCCTCTTCGGCTCCGACATAGGCGTGCCCCGCGACTGGCTC
AAGGCCTTGGACGACGCCGAGAAAAGCAACACCAACACCCACCGACAAAC
AGCCGACGCTGCTCCTGTTGCTGCCGCTGCTTCTGTGGCTGCTGTCCCAG
CTGCTGACGTGGAAGATCCCCGCACAATCCACCACTTCTCCTTTGATTGG
TCCGGCATTCACGATCACCACAAGCCCACCCTCCCTCCCTCCTTCGACGG
GGACCATCCGTCTATCCCAGGGATCCCTGCTGAACATCGGTACCTGGCGT
GGACGAGTGAGAACGAGGAGAATGGCGAGTTGGTGCGGCGGCAGCAGCAG
GCCGGGAATGGCGAGGCTTTCGAACGCACCTTTACCGGTTCCTTCAATTG
GGATCATCCCACCCTCCCACCCCTCCCCACCCATCCCGCCCTCCCTCCCT
CCCTCGATGGCCTCTTCCCTCCTTCCCTCCCCAACGCCCTGTGGCAGATC
CGTCTGGTCATCCAGGGAGCTCCCTCCCTCATTGAAGAGAACAAGGAGGA
GGTTGCTGCCCGGTTTAAGTCCTTACTGGACCACATCCTCTCCACCTCTT
CCGCCCCTTCTCCCTCGTCCTACGACGGTGCCGTCCGCGTGGACTTCACC
ACCCTGGCTGCCGCATTGGGCGCCGGGAGCAAACTCAGGGGAAGCGTTGA
TCCCCTCTTGAAGGAAGCGGAGGAAGCTCCCCTCCCGTCCTCGTGCGCAG
AAGCCGCAGCTGCGGCTGTCCTTCCGACCTTCATGGTGGTGGAGGGCAAT
GGGCCAGTGGTCAAGGAAGTCCTGGCAGCTGCTTTGACGAGCGAGACCTT
TCCGTCTATTTTCGACGTGCCCTCAGACTATTGCGGTCTGAAGGTCAGTC
AGATCATCATGGCCTAGAAAGACGCTTCTTCCGTTATTTTAAAATATGTT
GATTTATTTATTGATCTGATCACATAAATGAACCTTTTTGTAAGGGTGAA
AAGTCAAGAGATAAAAAAAGGTTTTGAAAGATAGACTTGGAGGATGTGGG
GGAAGAAGAAGAGAGAATGAGAGACGACATGGGCCAAAGGAGATGAGCGA
TGAAGCGCAGATGCGACTCGGGAAAAAAAGAAAGCACGCGTGAGTCAGGA
GGGGGGGAGAAAAACCAGGAGAACGACGAAAACGATAGAGTGAGTGAGGA
AATGAGAATGAGAACAGCATACACATTGGCCCATGTGTGTGCCTCAAAGA
CACTCATTGACATTGTTCGTCACAGCCGGAAAGCGGATTAACTAAATCTT
TACATCAGGGCCAAAATGTCATTTTCCCCTGTGATGAGTCATTTACTTAT
TCATCCATCCATTGACTTATTCATTAATAGATTCATTTTCTTATCAAAGT
CATAACAAGTGGATTGGTTGGAATGACAAGGGGGATGAAAATTGAACAGA
GTGTGTATGTGAAGAAGAGGGACAGGCAGGGAGACCGGAGTGAAAGAAAA
ATAAGAAGTTGCTTGAAATATTATTCACTGCCTAAACAGTGAGGGGCGGA
GGAAAGGAAGGGGTGGGGTTGGGAAGGAGGGCATGGAAAAGAGGTCTCTA
GTGGAAACCTCTTCCTCCTCCCCTTCCGCCTCCCCTCCCCCTTTGGTAAC
CGACGTCGACCGAGATCACCATCTACCTTTTGGGGAAAGGGAGAGGAGGA
AGAAGAAGAGCACGGGGGGTATGGGTGAGGCGGCGGTGCGCAAAATGATC
CCCACACTGGACGGAGAAGGGTATAAGAAATTTAAAAAAAAAAACTAAAT
TCATACATGGAATATTATCCCTCCATCATGCTCATGTTTAAGGACGTCAT
CCTCTCCGTTCCCCTCGCCCTCTCTTCTCCTTTTCGAAGAGAGTTTTGGG
TGGTTGTTCTCCCCTCGCCTTCATTTCTTGGACCCCATCTTCTTTACGAA
GAGAGAAACAACCGCCGGATTGATGGGAATATGAGGAAAGGGGAATATGA
GAAAAGAGAGTGAAGAAAGACAGGCCTCCAACATTAGATTTAAAATGTAT
TAATAAAGGTAAGAGTGAGTAAAGTGCAAATCAAATCGAGTTCAATGCGT
GCTTTATCTCTTTTACTCTTGGTCGTGGCATCGACTTCGTTTTCCTTTTG
CTTCTTCTTCTTTTTCTTGTCATT back to topprotein sequence of jgi.p|Nanoce1779_2|601143 >mRNA_8214-protein ID=mRNA_8214-protein|Name=jgi.p|Nanoce1779_2|601143|organism=Nannochloropsis oceanica|type=polypeptide|length=328bp
MRAIASLMLLLAPVAVSASAGSSLARLFGSDIGVPRDWLKALDDAEKSNT
NTHRQTADAAPVAAAASVAAVPAADVEDPRTIHHFSFDWSGIHDHHKPTL
PPSFDGDHPSIPGIPAEHRYLAWTSENEENGELVRRQQQAGNGEAFERTF
TGSFNWDHPTLPPLPTHPALPPSLDGLFPPSLPNALWQIRLVIQGAPSLI
EENKEEVAARFKSLLDHILSTSSAPSPSSYDGAVRVDFTTLAAALGAGSK
LRGSVDPLLKEAEEAPLPSSCAEAAAAAVLPTFMVVEGNGPVVKEVLAAA
LTSETFPSIFDVPSDYCGLKVSQIIMA* back to topmRNA from alignment at scaffold_23:70385..73104- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8214 ID=mRNA_8214|Name=jgi.p|Nanoce1779_2|601143|organism=Nannochloropsis oceanica|type=mRNA|length=2720bp|location=Sequence derived from alignment at scaffold_23:70385..73104- (Nannochloropsis oceanica)
ACAGACCACCAACACGCATACACCACACCAACCATGCGCGCTATCGCCTC
TCTGATGCTGCTATTGGCGCCCGTCGCCGTTTCCGCCTCCGCGGGTGAGT
GAGAGAAAATGTTTCTAATGTTGTGTGTGTGTCTCATCCCCTTTGCTTGC
CATGTTGGCCATGTTGCCTGCCCTGGCCCCATGCCCTCTCCCCCCACACA
CACTCCCCTCCCTCCACTCCCCTCCATGCATGTTCCTCTGTCTGCCTGTC
GTCCACCCCCTAGGAGTGCAAATGTCCCGACACACCTGAACCGTCAGCCT
CATGACGAGCCCATCGCTTGTCTACTAAAGGTGCTCTCATTCGCACAAGT
AATACACTCCCACCGTATCTCATCACACCAACCATCAACCAAATACTCTC
CCTCTCCCTCCCTCCCTTTTCCTTTTGCCTGTCTATCCCGCCCTCGAGGC
CAAGCCAAAGCGACGGCCGTTTCACATCTGCGCTACCTGTGATTCTCTCA
CCCACCCATCTCTCCAACCCTCCCTTTCCCTCTTTCACAGGGTCCTCCCT
CGCCCGCCTCTTCGGCTCCGACATAGGCGTGCCCCGCGACTGGCTCAAGG
CCTTGGACGACGCCGAGAAAAGCAACACCAACACCCACCGACAAACAGCC
GACGCTGCTCCTGTTGCTGCCGCTGCTTCTGTGGCTGCTGTCCCAGCTGC
TGACGTGGAAGATCCCCGCACAATCCACCACTTCTCCTTTGATTGGTCCG
GCATTCACGATCACCACAAGCCCACCCTCCCTCCCTCCTTCGACGGGGAC
CATCCGTCTATCCCAGGGATCCCTGCTGAACATCGGTACCTGGCGTGGAC
GAGTGAGAACGAGGAGAATGGCGAGTTGGTGCGGCGGCAGCAGCAGGCCG
GGAATGGCGAGGCTTTCGAACGCACCTTTACCGGTTCCTTCAATTGGGAT
CATCCCACCCTCCCACCCCTCCCCACCCATCCCGCCCTCCCTCCCTCCCT
CGATGGCCTCTTCCCTCCTTCCCTCCCCAACGCCCTGTGGCAGATCCGTC
TGGTCATCCAGGGAGCTCCCTCCCTCATTGAAGAGAACAAGGAGGAGGTT
GCTGCCCGGTTTAAGTCCTTACTGGACCACATCCTCTCCACCTCTTCCGC
CCCTTCTCCCTCGTCCTACGACGGTGCCGTCCGCGTGGACTTCACCACCC
TGGCTGCCGCATTGGGCGCCGGGAGCAAACTCAGGGGAAGCGTTGATCCC
CTCTTGAAGGAAGCGGAGGAAGCTCCCCTCCCGTCCTCGTGCGCAGAAGC
CGCAGCTGCGGCTGTCCTTCCGACCTTCATGGTGGTGGAGGGCAATGGGC
CAGTGGTCAAGGAAGTCCTGGCAGCTGCTTTGACGAGCGAGACCTTTCCG
TCTATTTTCGACGTGCCCTCAGACTATTGCGGTCTGAAGGTCAGTCAGAT
CATCATGGCCTAGAAAGACGCTTCTTCCGTTATTTTAAAATATGTTGATT
TATTTATTGATCTGATCACATAAATGAACCTTTTTGTAAGGGTGAAAAGT
CAAGAGATAAAAAAAGGTTTTGAAAGATAGACTTGGAGGATGTGGGGGAA
GAAGAAGAGAGAATGAGAGACGACATGGGCCAAAGGAGATGAGCGATGAA
GCGCAGATGCGACTCGGGAAAAAAAGAAAGCACGCGTGAGTCAGGAGGGG
GGGAGAAAAACCAGGAGAACGACGAAAACGATAGAGTGAGTGAGGAAATG
AGAATGAGAACAGCATACACATTGGCCCATGTGTGTGCCTCAAAGACACT
CATTGACATTGTTCGTCACAGCCGGAAAGCGGATTAACTAAATCTTTACA
TCAGGGCCAAAATGTCATTTTCCCCTGTGATGAGTCATTTACTTATTCAT
CCATCCATTGACTTATTCATTAATAGATTCATTTTCTTATCAAAGTCATA
ACAAGTGGATTGGTTGGAATGACAAGGGGGATGAAAATTGAACAGAGTGT
GTATGTGAAGAAGAGGGACAGGCAGGGAGACCGGAGTGAAAGAAAAATAA
GAAGTTGCTTGAAATATTATTCACTGCCTAAACAGTGAGGGGCGGAGGAA
AGGAAGGGGTGGGGTTGGGAAGGAGGGCATGGAAAAGAGGTCTCTAGTGG
AAACCTCTTCCTCCTCCCCTTCCGCCTCCCCTCCCCCTTTGGTAACCGAC
GTCGACCGAGATCACCATCTACCTTTTGGGGAAAGGGAGAGGAGGAAGAA
GAAGAGCACGGGGGGTATGGGTGAGGCGGCGGTGCGCAAAATGATCCCCA
CACTGGACGGAGAAGGGTATAAGAAATTTAAAAAAAAAAACTAAATTCAT
ACATGGAATATTATCCCTCCATCATGCTCATGTTTAAGGACGTCATCCTC
TCCGTTCCCCTCGCCCTCTCTTCTCCTTTTCGAAGAGAGTTTTGGGTGGT
TGTTCTCCCCTCGCCTTCATTTCTTGGACCCCATCTTCTTTACGAAGAGA
GAAACAACCGCCGGATTGATGGGAATATGAGGAAAGGGGAATATGAGAAA
AGAGAGTGAAGAAAGACAGGCCTCCAACATTAGATTTAAAATGTATTAAT
AAAGGTAAGAGTGAGTAAAGTGCAAATCAAATCGAGTTCAATGCGTGCTT
TATCTCTTTTACTCTTGGTCGTGGCATCGACTTCGTTTTCCTTTTGCTTC
TTCTTCTTTTTCTTGTCATT back to topCoding sequence (CDS) from alignment at scaffold_23:70385..73104- >mRNA_8214 ID=mRNA_8214|Name=jgi.p|Nanoce1779_2|601143|organism=Nannochloropsis oceanica|type=CDS|length=1968bp|location=Sequence derived from alignment at scaffold_23:70385..73104- (Nannochloropsis oceanica)
GGTCCTCCCTCGCCCGCCTCTTCGGCTCCGACATAGGCGTGCCCCGCGAC
TGGCTCAAGGCCTTGGACGACGCCGAGAAAAGCAACACCAACACCCACCG
ACAAACAGCCGACGCTGCTCCTGTTGCTGCCGCTGCTTCTGTGGCTGCTG
TCCCAGCTGCTGACGTGGAAGATCCCCGCACAATCCACCACTTCTCCTTT
GATTGGTCCGGCATTCACGATCACCACAAGCCCACCCTCCCTCCCTCCTT
CGACGGGGACCATCCGTCTATCCCAGGGATCCCTGCTGAACATCGGTACC
TGGCGTGGACGAGTGAGAACGAGGAGAATGGCGAGTTGGTGCGGCGGCAG
CAGCAGGCCGGGAATGGCGAGGCTTTCGAACGCACCTTTACCGGTTCCTT
CAATTGGGATCATCCCACCCTCCCACCCCTCCCCACCCATCCCGCCCTCC
CTCCCTCCCTCGATGGCCTCTTCCCTCCTTCCCTCCCCAACGCCCTGTGG
CAGATCCGTCTGGTCATCCAGGGAGCTCCCTCCCTCATTGAAGAGAACAA
GGAGGAGGTTGCTGCCCGGTTTAAGTCCTTACTGGACCACATCCTCTCCA
CCTCTTCCGCCCCTTCTCCCTCGTCCTACGACGGTGCCGTCCGCGTGGAC
TTCACCACCCTGGCTGCCGCATTGGGCGCCGGGAGCAAACTCAGGGGAAG
CGTTGATCCCCTCTTGAAGGAAGCGGAGGAAGCTCCCCTCCCGTCCTCGT
GCGCAGAAGCCGCAGCTGCGGCTGTCCTTCCGACCTTCATGGTGGTGGAG
GGCAATGGGCCAGTGGTCAAGGAAGTCCTGGCAGCTGCTTTGACGAGCGA
GACCTTTCCGTCTATTTTCGACGTGCCCTCAGACTATTGCGGTCTGAAGG
TCAGTCAGATCATCATGGCCTAGATGCGCGCTATCGCCTCTCTGATGCTG
CTATTGGCGCCCGTCGCCGTTTCCGCCTCCGCGGGGTCCTCCCTCGCCCG
CCTCTTCGGCTCCGACATAGGCGTGCCCCGCGACTGGCTCAAGGCCTTGG
ACGACGCCGAGAAAAGCAACACCAACACCCACCGACAAACAGCCGACGCT
GCTCCTGTTGCTGCCGCTGCTTCTGTGGCTGCTGTCCCAGCTGCTGACGT
GGAAGATCCCCGCACAATCCACCACTTCTCCTTTGATTGGTCCGGCATTC
ACGATCACCACAAGCCCACCCTCCCTCCCTCCTTCGACGGGGACCATCCG
TCTATCCCAGGGATCCCTGCTGAACATCGGTACCTGGCGTGGACGAGTGA
GAACGAGGAGAATGGCGAGTTGGTGCGGCGGCAGCAGCAGGCCGGGAATG
GCGAGGCTTTCGAACGCACCTTTACCGGTTCCTTCAATTGGGATCATCCC
ACCCTCCCACCCCTCCCCACCCATCCCGCCCTCCCTCCCTCCCTCGATGG
CCTCTTCCCTCCTTCCCTCCCCAACGCCCTGTGGCAGATCCGTCTGGTCA
TCCAGGGAGCTCCCTCCCTCATTGAAGAGAACAAGGAGGAGGTTGCTGCC
CGGTTTAAGTCCTTACTGGACCACATCCTCTCCACCTCTTCCGCCCCTTC
TCCCTCGTCCTACGACGGTGCCGTCCGCGTGGACTTCACCACCCTGGCTG
CCGCATTGGGCGCCGGGAGCAAACTCAGGGGAAGCGTTGATCCCCTCTTG
AAGGAAGCGGAGGAAGCTCCCCTCCCGTCCTCGTGCGCAGAAGCCGCAGC
TGCGGCTGTCCTTCCGACCTTCATGGTGGTGGAGGGCAATGGGCCAGTGG
TCAAGGAAGTCCTGGCAGCTGCTTTGACGAGCGAGACCTTTCCGTCTATT
TTCGACGTGCCCTCAGACTATTGCGGTCTGAAGGTCAGTCAGATCATCAT
GGCCTAGATGCGCGCTATCGCCTCTCTGATGCTGCTATTGGCGCCCGTCG
CCGTTTCCGCCTCCGCGG back to top
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