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Properties
| Property Name | Value |
|---|
| TranscriptId | 192821 |
| Track | FilteredModels2 |
| ProteinId | 192735 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:14981..17223 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8353 ID=mRNA_8353|Name=jgi.p|Nanoce1779_2|192735|organism=Nannochloropsis oceanica|type=mRNA|length=1054bp
TCAATTGGACACAGCCGTCCAACCTGGCCAGAACAACGGACGTCCTCGTC
TACCTCGCGCAGAACCTCACAAAGCTGAACGCCTCCAAGGAGATGGAAGG
CAGCATCGCTGGTCTCTGTCTCCTCAACGAGCCGTGGACTACGGCCGTCG
GTGGCCCCGTCCAACTCGACACCCTCAAATCCTGGCTGCAGACCACCACC
GATGCCGTTCTCGCCACAGGGTGGAAAGGCGACGTCTGGTTCCCTGACGG
CTTTGCCCTAGACTGGGACGGCTGGCGCGATTTTCTCACGCCTCCCGAAT
ACCCTCGGAATATATTCGCCGATGCCCACATCTACATGATGTTTGACGAC
GCCGTGGCCGACCTTGATGCGGCAGGCCAAGCACAGAATTTTTGCCGGGA
GGACAATCACTACAGACAGCAGCTCGAGCGCGCGGGCGGTGTGGGCAGTG
GGGTGGTGGTGGGAGAGTACTCGATGGACTTCCGGAAGTGGCCGACGTCC
TTCCCCTACAGCAACGAGACCCTCACGGGCCTCCAAGACTTGCTTCTGGT
TCAGCACTCTATAACGTCATTGGTGACAAACGTGAGAACGCAGCTGTTGG
CGGATTTTTCTGGTCGTTCAAGTCCCTGGGCCGCGTCGATATCCAGACAT
TCGACCAGAGCGACCTGGCCGTCGACAACTCCTTCAATAATTTACACTCC
CCGTGGAGCTACCTCTCCTTGCTCACCGACGGCGTGGCCAGCCCGAATCT
GGCCAAGGCCACGCCACCATGTTAAGGGCTGCAACCAAGGGAAGGAGGGG
GGGAAGGAGGGGGCGCCAGTCGTGAAGGTAATTTAGGACGTATGCGTCTG
ACGGCTGAAAGGAATATTTGATGGGTCAGAACGAGAAGGATGGATGTATG
GCCGTAACGCATGCTATTGGGGGGGCATATATTATATTATATATTACATA
TTACATCAAAGAAAACAGGGAAAGAGGGTGGGCGGGGTCGAGACTTTGCA
TGTGTGAGAGTAGTAATGGGATGGCGTGTGGGCGTTAGAGGGACAGCTGA
ATGT back to topprotein sequence of jgi.p|Nanoce1779_2|192735 >mRNA_8353-protein ID=mRNA_8353-protein|Name=jgi.p|Nanoce1779_2|192735|organism=Nannochloropsis oceanica|type=polypeptide|length=248bp
MEGSIAGLCLLNEPWTTAVGGPVQLDTLKSWLQTTTDAVLATGWKGDVWF
PDGFALDWDGWRDFLTPPEYPRNIFADAHIYMMFDDAVADLDAAGQAQNF
CREDNHYRQQLERAGGVGSGVVVGEYSMDFRKWPTSFPYSNETLTGLQDL
LLVQHSITSLVTNVRTQLLADFSGRSSPWAASISRHSTRATWPSTTPSII
YTPRGATSPCSPTAWPARIWPRPRHHVKGCNQGKEGGKEGAPVVKVI* back to topmRNA from alignment at scaffold_24:14981..17223+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8353 ID=mRNA_8353|Name=jgi.p|Nanoce1779_2|192735|organism=Nannochloropsis oceanica|type=mRNA|length=2243bp|location=Sequence derived from alignment at scaffold_24:14981..17223+ (Nannochloropsis oceanica)
TCAATTGGACACAGCCGTCCAACCTGGCCAGAACAACGGACGTCCTCGTC
TACCTCGCGCAGAACCTCACAAAGCTGAACGCCTCCAAGGAGATGGAAGG
CAAGCAAGCCCTCCCTCCCTCCCTCCCTCTTTCCCTCCCGCCCTCCCTAG
CGCCCTGCCGTCTTCTCCTCATGGCTCCCCCTCCCTCCCTCCTTCCCTCC
TTCTCTCCCACAGGCAGCATCGCTGGTCTCTGTCTCCTCAACGAGCCGTG
GACTACGGCCGTCGGTGGCCCCGTCCAACTCGACACCCTCAAATCCTGGT
AAGCCCCTCCCCCCCTCCCTTCTTCCCTCCCCCCCTTCCTCCTTCCCCCC
CCCCCCTTCCTCCTTCCCTCTTCCCCTCCCTCCCGTGGGACTGGAAGAGC
TCTGTCCTCCTTTCCCTTTACTCATCCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCAGGCTGCAGACCACCACCGATGCCGTTCTCGCCACAGGGTG
GAAAGGCGACGTCTGGTTCCCTGACGGCTTTGCCCTAGACTGTAAGGAGG
GAGGGAGGGGAGGAGGGGAGAAAGGGAGGGGAGGTGGATGGACACTCTTT
TCTCAATATAATGCTCTCGTTTCACTCAGGTACCTTTCCCCCTCCCTCCC
TCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCTCTTCTAGGGGACGGCTGG
CGCGATTTTCTCACGCCTCCCGAATACCCTCGGAATATATTCGCCGATGC
CCACATCTACATGATGTTTGACGACGCCGTGGCCGACCTTGATGGTATGC
CCTCCCTCCCTCCCTCCTGCACGCCTTCACTCCCTGTCATCCCCTTGCTG
TGTTTTGGTTGATATTATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTATCCCTCCTCCGATCTACAACCAAAGGAAGTACGACAATCAG
CAGCTTCCTCTTGTTCACTTCCCCGCTCAATCCTCCCCCTCCCTCCCTCC
CTCAGCGGCAGGCCAAGCACAGAATTTTTGCCGGGAGGACAATCACTACA
GACAGCAGCTCGAGCGCGCGGGCGGTGTGGGCAGTGGGGTGGTGGTGGGA
GAGTACTCGATGGGTAGGGAGGGAGGGAGGGAGGGAGGAACAGGCCCTGT
GTATTCGTCCACGCCATTGCGTTTCCCACGCACCGTATCTCCTTTTACCC
CTCCCTCCCTCCCTCCCCCCCGCCCTCCCCCCCGCCCTCCCAGACTTCCG
GAAGTGGCCGACGTCCTTCCCCTACAGCAACGAGACCCTCACGGGCCTCC
AAGACTTGCTTCTGGTTCAGCAGCATGTGAGCCGTGGGGGGGGAAGGAGG
AAGAGAGGGTGGGAGGGTGGGGGGGTGGAACGTATGTGTATATGTTCTTT
GTGCTTGTGTCTGTGGGAACCTCCCTCCTTCCCTCCGTCCTCCCCTCCCT
CCCTTTTCTTCAAATTGTATAGTCAACTGAAGGTTTCCGCATGCCACCAC
TTCTTAACTCCTCCCTCCCTTCCTCTCTCTTTCCCGTCCTCCTTCCCTCC
CTCAGCTCTATAACGTCATTGGTGACAAACGTGAGAACGCAGCTGTTGGC
GGATTTTTCTGGTCGTTCAAGGTACGAATGACTTTGAGACCTCTTCCTCC
CTCCCTCCTTCTCTCCCTCCCTCATGGTCCACTTCAGACGCTCCATTTCC
CAGCAAAGCAGCTCATCACGAGGAAAGCACCCCTCGAAATCACTGCCAAC
GGCCTTCTCTTCCCTCCCTTTCTCCCTCCCTCCCACCCACCCTCGTTCCC
TCCCTCCTCAGTCCCTGGGCCGCGTCGATATCCAGACATTCGACCAGAGC
GACCTGGCCGTCGACAACTCCTTCAATAATTTACACTCCCCGTGGAGCTA
CCTCTCCTTGCTCACCGACGGCGTGGCCAGCCCGAATCTGGCCAAGGCCA
CGCCACCATGTTAAGGGCTGCAACCAAGGGAAGGAGGGGGGGAAGGAGGG
GGCGCCAGTCGTGAAGGTAATTTAGGACGTATGCGTCTGACGGCTGAAAG
GAATATTTGATGGGTCAGAACGAGAAGGATGGATGTATGGCCGTAACGCA
TGCTATTGGGGGGGCATATATTATATTATATATTACATATTACATCAAAG
AAAACAGGGAAAGAGGGTGGGCGGGGTCGAGACTTTGCATGTGTGAGAGT
AGTAATGGGATGGCGTGTGGGCGTTAGAGGGACAGCTGAATGT back to topCoding sequence (CDS) from alignment at scaffold_24:14981..17223+ >mRNA_8353 ID=mRNA_8353|Name=jgi.p|Nanoce1779_2|192735|organism=Nannochloropsis oceanica|type=CDS|length=5952bp|location=Sequence derived from alignment at scaffold_24:14981..17223+ (Nannochloropsis oceanica)
ATGGAAGGCAGCATCGCTGGTCTCTGTCTCCTCAACGAGCCGTGGACTAC
GGCCGTCGGTGGCCCCGTCCAACTCGACACCCTCAAATCCTGGCTGCAGA
CCACCACCGATGCCGTTCTCGCCACAGGGTGGAAAGGCGACGTCTGGTTC
CCTGACGGCTTTGCCCTAGACTGGGACGGCTGGCGCGATTTTCTCACGCC
TCCCGAATACCCTCGGAATATATTCGCCGATGCCCACATCTACATGATGT
TTGACGACGCCGTGGCCGACCTTGATGCGGCAGGCCAAGCACAGAATTTT
TGCCGGGAGGACAATCACTACAGACAGCAGCTCGAGCGCGCGGGCGGTGT
GGGCAGTGGGGTGGTGGTGGGAGAGTACTCGATGGACTTCCGGAAGTGGC
CGACGTCCTTCCCCTACAGCAACGAGACCCTCACGGGCCTCCAAGACTTG
CTTCTGGTTCAGCACTCTATAACGTCATTGGTGACAAACGTGAGAACGCA
GCTGTTGGCGGATTTTTCTGGTCGTTCAAGTCCCTGGGCCGCGTCGATAT
CCAGACATTCGACCAGAGCGACCTGGCCGTCGACAACTCCTTCAATAATT
TACACTCCCCGTGGAGCTACCTCTCCTTGCTCACCGACGGCGTGGCCAGC
CCGAATCTGGCCAAGGCCACGCCACCATGTTAAGGGCTGCAACCAAGGGA
AGGAGGGGGGGAAGGAGGGGGCGCCAGTCGTGAAGGTAATTTAGATGGAA
GGCAGCATCGCTGGTCTCTGTCTCCTCAACGAGCCGTGGACTACGGCCGT
CGGTGGCCCCGTCCAACTCGACACCCTCAAATCCTGGCTGCAGACCACCA
CCGATGCCGTTCTCGCCACAGGGTGGAAAGGCGACGTCTGGTTCCCTGAC
GGCTTTGCCCTAGACTGGGACGGCTGGCGCGATTTTCTCACGCCTCCCGA
ATACCCTCGGAATATATTCGCCGATGCCCACATCTACATGATGTTTGACG
ACGCCGTGGCCGACCTTGATGCGGCAGGCCAAGCACAGAATTTTTGCCGG
GAGGACAATCACTACAGACAGCAGCTCGAGCGCGCGGGCGGTGTGGGCAG
TGGGGTGGTGGTGGGAGAGTACTCGATGGACTTCCGGAAGTGGCCGACGT
CCTTCCCCTACAGCAACGAGACCCTCACGGGCCTCCAAGACTTGCTTCTG
GTTCAGCACTCTATAACGTCATTGGTGACAAACGTGAGAACGCAGCTGTT
GGCGGATTTTTCTGGTCGTTCAAGTCCCTGGGCCGCGTCGATATCCAGAC
ATTCGACCAGAGCGACCTGGCCGTCGACAACTCCTTCAATAATTTACACT
CCCCGTGGAGCTACCTCTCCTTGCTCACCGACGGCGTGGCCAGCCCGAAT
CTGGCCAAGGCCACGCCACCATGTTAAGGGCTGCAACCAAGGGAAGGAGG
GGGGGAAGGAGGGGGCGCCAGTCGTGAAGGTAATTTAGATGGAAGGCAGC
ATCGCTGGTCTCTGTCTCCTCAACGAGCCGTGGACTACGGCCGTCGGTGG
CCCCGTCCAACTCGACACCCTCAAATCCTGGCTGCAGACCACCACCGATG
CCGTTCTCGCCACAGGGTGGAAAGGCGACGTCTGGTTCCCTGACGGCTTT
GCCCTAGACTGGGACGGCTGGCGCGATTTTCTCACGCCTCCCGAATACCC
TCGGAATATATTCGCCGATGCCCACATCTACATGATGTTTGACGACGCCG
TGGCCGACCTTGATGCGGCAGGCCAAGCACAGAATTTTTGCCGGGAGGAC
AATCACTACAGACAGCAGCTCGAGCGCGCGGGCGGTGTGGGCAGTGGGGT
GGTGGTGGGAGAGTACTCGATGGACTTCCGGAAGTGGCCGACGTCCTTCC
CCTACAGCAACGAGACCCTCACGGGCCTCCAAGACTTGCTTCTGGTTCAG
CACTCTATAACGTCATTGGTGACAAACGTGAGAACGCAGCTGTTGGCGGA
TTTTTCTGGTCGTTCAAGTCCCTGGGCCGCGTCGATATCCAGACATTCGA
CCAGAGCGACCTGGCCGTCGACAACTCCTTCAATAATTTACACTCCCCGT
GGAGCTACCTCTCCTTGCTCACCGACGGCGTGGCCAGCCCGAATCTGGCC
AAGGCCACGCCACCATGTTAAGGGCTGCAACCAAGGGAAGGAGGGGGGGA
AGGAGGGGGCGCCAGTCGTGAAGGTAATTTAGATGGAAGGCAGCATCGCT
GGTCTCTGTCTCCTCAACGAGCCGTGGACTACGGCCGTCGGTGGCCCCGT
CCAACTCGACACCCTCAAATCCTGGCTGCAGACCACCACCGATGCCGTTC
TCGCCACAGGGTGGAAAGGCGACGTCTGGTTCCCTGACGGCTTTGCCCTA
GACTGGGACGGCTGGCGCGATTTTCTCACGCCTCCCGAATACCCTCGGAA
TATATTCGCCGATGCCCACATCTACATGATGTTTGACGACGCCGTGGCCG
ACCTTGATGCGGCAGGCCAAGCACAGAATTTTTGCCGGGAGGACAATCAC
TACAGACAGCAGCTCGAGCGCGCGGGCGGTGTGGGCAGTGGGGTGGTGGT
GGGAGAGTACTCGATGGACTTCCGGAAGTGGCCGACGTCCTTCCCCTACA
GCAACGAGACCCTCACGGGCCTCCAAGACTTGCTTCTGGTTCAGCACTCT
ATAACGTCATTGGTGACAAACGTGAGAACGCAGCTGTTGGCGGATTTTTC
TGGTCGTTCAAGTCCCTGGGCCGCGTCGATATCCAGACATTCGACCAGAG
CGACCTGGCCGTCGACAACTCCTTCAATAATTTACACTCCCCGTGGAGCT
ACCTCTCCTTGCTCACCGACGGCGTGGCCAGCCCGAATCTGGCCAAGGCC
ACGCCACCATGTTAAGGGCTGCAACCAAGGGAAGGAGGGGGGGAAGGAGG
GGGCGCCAGTCGTGAAGGTAATTTAGATGGAAGGCAGCATCGCTGGTCTC
TGTCTCCTCAACGAGCCGTGGACTACGGCCGTCGGTGGCCCCGTCCAACT
CGACACCCTCAAATCCTGGCTGCAGACCACCACCGATGCCGTTCTCGCCA
CAGGGTGGAAAGGCGACGTCTGGTTCCCTGACGGCTTTGCCCTAGACTGG
GACGGCTGGCGCGATTTTCTCACGCCTCCCGAATACCCTCGGAATATATT
CGCCGATGCCCACATCTACATGATGTTTGACGACGCCGTGGCCGACCTTG
ATGCGGCAGGCCAAGCACAGAATTTTTGCCGGGAGGACAATCACTACAGA
CAGCAGCTCGAGCGCGCGGGCGGTGTGGGCAGTGGGGTGGTGGTGGGAGA
GTACTCGATGGACTTCCGGAAGTGGCCGACGTCCTTCCCCTACAGCAACG
AGACCCTCACGGGCCTCCAAGACTTGCTTCTGGTTCAGCACTCTATAACG
TCATTGGTGACAAACGTGAGAACGCAGCTGTTGGCGGATTTTTCTGGTCG
TTCAAGTCCCTGGGCCGCGTCGATATCCAGACATTCGACCAGAGCGACCT
GGCCGTCGACAACTCCTTCAATAATTTACACTCCCCGTGGAGCTACCTCT
CCTTGCTCACCGACGGCGTGGCCAGCCCGAATCTGGCCAAGGCCACGCCA
CCATGTTAAGGGCTGCAACCAAGGGAAGGAGGGGGGGAAGGAGGGGGCGC
CAGTCGTGAAGGTAATTTAGATGGAAGGCAGCATCGCTGGTCTCTGTCTC
CTCAACGAGCCGTGGACTACGGCCGTCGGTGGCCCCGTCCAACTCGACAC
CCTCAAATCCTGGCTGCAGACCACCACCGATGCCGTTCTCGCCACAGGGT
GGAAAGGCGACGTCTGGTTCCCTGACGGCTTTGCCCTAGACTGGGACGGC
TGGCGCGATTTTCTCACGCCTCCCGAATACCCTCGGAATATATTCGCCGA
TGCCCACATCTACATGATGTTTGACGACGCCGTGGCCGACCTTGATGCGG
CAGGCCAAGCACAGAATTTTTGCCGGGAGGACAATCACTACAGACAGCAG
CTCGAGCGCGCGGGCGGTGTGGGCAGTGGGGTGGTGGTGGGAGAGTACTC
GATGGACTTCCGGAAGTGGCCGACGTCCTTCCCCTACAGCAACGAGACCC
TCACGGGCCTCCAAGACTTGCTTCTGGTTCAGCACTCTATAACGTCATTG
GTGACAAACGTGAGAACGCAGCTGTTGGCGGATTTTTCTGGTCGTTCAAG
TCCCTGGGCCGCGTCGATATCCAGACATTCGACCAGAGCGACCTGGCCGT
CGACAACTCCTTCAATAATTTACACTCCCCGTGGAGCTACCTCTCCTTGC
TCACCGACGGCGTGGCCAGCCCGAATCTGGCCAAGGCCACGCCACCATGT
TAAGGGCTGCAACCAAGGGAAGGAGGGGGGGAAGGAGGGGGCGCCAGTCG
TGAAGGTAATTTAGATGGAAGGCAGCATCGCTGGTCTCTGTCTCCTCAAC
GAGCCGTGGACTACGGCCGTCGGTGGCCCCGTCCAACTCGACACCCTCAA
ATCCTGGCTGCAGACCACCACCGATGCCGTTCTCGCCACAGGGTGGAAAG
GCGACGTCTGGTTCCCTGACGGCTTTGCCCTAGACTGGGACGGCTGGCGC
GATTTTCTCACGCCTCCCGAATACCCTCGGAATATATTCGCCGATGCCCA
CATCTACATGATGTTTGACGACGCCGTGGCCGACCTTGATGCGGCAGGCC
AAGCACAGAATTTTTGCCGGGAGGACAATCACTACAGACAGCAGCTCGAG
CGCGCGGGCGGTGTGGGCAGTGGGGTGGTGGTGGGAGAGTACTCGATGGA
CTTCCGGAAGTGGCCGACGTCCTTCCCCTACAGCAACGAGACCCTCACGG
GCCTCCAAGACTTGCTTCTGGTTCAGCACTCTATAACGTCATTGGTGACA
AACGTGAGAACGCAGCTGTTGGCGGATTTTTCTGGTCGTTCAAGTCCCTG
GGCCGCGTCGATATCCAGACATTCGACCAGAGCGACCTGGCCGTCGACAA
CTCCTTCAATAATTTACACTCCCCGTGGAGCTACCTCTCCTTGCTCACCG
ACGGCGTGGCCAGCCCGAATCTGGCCAAGGCCACGCCACCATGTTAAGGG
CTGCAACCAAGGGAAGGAGGGGGGGAAGGAGGGGGCGCCAGTCGTGAAGG
TAATTTAGATGGAAGGCAGCATCGCTGGTCTCTGTCTCCTCAACGAGCCG
TGGACTACGGCCGTCGGTGGCCCCGTCCAACTCGACACCCTCAAATCCTG
GCTGCAGACCACCACCGATGCCGTTCTCGCCACAGGGTGGAAAGGCGACG
TCTGGTTCCCTGACGGCTTTGCCCTAGACTGGGACGGCTGGCGCGATTTT
CTCACGCCTCCCGAATACCCTCGGAATATATTCGCCGATGCCCACATCTA
CATGATGTTTGACGACGCCGTGGCCGACCTTGATGCGGCAGGCCAAGCAC
AGAATTTTTGCCGGGAGGACAATCACTACAGACAGCAGCTCGAGCGCGCG
GGCGGTGTGGGCAGTGGGGTGGTGGTGGGAGAGTACTCGATGGACTTCCG
GAAGTGGCCGACGTCCTTCCCCTACAGCAACGAGACCCTCACGGGCCTCC
AAGACTTGCTTCTGGTTCAGCACTCTATAACGTCATTGGTGACAAACGTG
AGAACGCAGCTGTTGGCGGATTTTTCTGGTCGTTCAAGTCCCTGGGCCGC
GTCGATATCCAGACATTCGACCAGAGCGACCTGGCCGTCGACAACTCCTT
CAATAATTTACACTCCCCGTGGAGCTACCTCTCCTTGCTCACCGACGGCG
TGGCCAGCCCGAATCTGGCCAAGGCCACGCCACCATGTTAAGGGCTGCAA
CCAAGGGAAGGAGGGGGGGAAGGAGGGGGCGCCAGTCGTGAAGGTAATTT
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