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Properties
| Property Name | Value |
| TranscriptId | 201720 |
| Track | FilteredModels2 |
| ProteinId | 201634 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_25 | supercontig | scaffold_25:170474..172933 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8105 ID=mRNA_8105|Name=jgi.p|Nanoce1779_2|201634|organism=Nannochloropsis oceanica|type=mRNA|length=2252bp TTGACATTTAAAGATTCGCGTCGTCCACCAGCCCATTTAACCTCCCCTCC CGAATCGCTACTACGTGTATCACTCCAGCAGTTTTCTATTATCTCCCTCA TGCCCACCCTTTCTCCTTTATACATCTCCACGGGTTATGAACGAGTTGGT CATGGACACGAGAGACTGCCTGACGTGGCGACGTGCTCATATGCTGCGGC CATGAAAAGCGGAGATTGTAGCACGAGGGGAGGTCGGCGAGATGGAGGGC GAGGCGGCAGGGGCAGTGGGCGTGTAGACTCCTCACGCGAGCAAAAGCAC AAAGACTCGGCCGCGGCACCAGGCAATGGGCGGCGGAGGCGCAGCAGAGG CATCGATCCTGGTGCATTTGAGCTGCAGCTGGAGGAGCAGCGGCAGAGAC AACAGCAGCGACGAGAGGGAGGAAATGGAGGCGGAGAACGAGGAGAAGAT AACGGAGGAGGAAGTGCAATCGGGGAACAGCGCACAAGCTCTGTTAAATC AGGCCCGCATAACACTACACCACCGTCAATCTCCGCTCCCTCATCCTCCG ACCAGCAGCGATCGGAGCAGCGTCGCCCTCAGTCATTAATTCGAGGCTTC CAATACGACGAGGCCCGCGGCCGGTACTTTCCTACCTCTTCCCCCTTCTT CTCCTCTTCTTCTTCTTCAGAGCCCTTTCGGCCTCCCAAAAATCTTCGTG GCGCCTCTTCCTTATCGACGCTACCAGCATCCGCCTCCGCCTTCTCCTCA TTATCCACCTCCTCCTTTTCGAAAGGAGCGCCATTTGTCTGTGTAAACTT CACCCGCCGCCTGCGCGAACGAGAATGGCGACACGGACAACAGCAGCTTC ACATGGGATCACTTCACAGGCTCCTTCACCTGAGCACCTCCACAGATCTA GGCCAGGAAGGCACATTGGAGGACATCGATGTGGCGGGGGGTGGAGTAGT AACAGGAGCTCGCAACGGCATGCTACACGTGAGCGCCCTTCCCCTATCAT CCGACGAATTCCCTCGGCGCTGGCCTATTTTGAGCTTTCACTCTTCAGTG GTACGCGTTCGTTGGCGGGTCGGCAGGCAGGGAGAGCTGCCGTGTCTCCT GGCGGTTGCGACGATGGGAACGGCGGCGGGAAAGGCGGCTGTAACGGTGT GCAAGCTCCAGGGGGAAAGTAGTGAAGAAGGAATCGGGCATGGAGAAGGA GGAGGAAGCGATGGAGGACAGGGAGGAAGAAGAGGATGGATGGGAAGCGA AAGGCTAATTCGAGAGGATCGATTTCCGTTGGATGCTCGGGATGTGTGGG GGGTGGAGTGGGAGCCGGGGCAAGGGCGGCGCCTCCTTCCCTGCCTCTCC CATGGGCCTTTGCTCGTGGTGGACGTTGAGGCGCGTCGGCAGTTACGGCA TTCTTTTCGGTTGCCGAGCGATTGTTTTGCAGCATGTTGGAGCACTGGTG GCGAAAGCAGCAATGGCAGCAGCAACAGTAGCAGCAGTGAGGCAGAGGAG GGTGTGTTTTTGGGGCTGAGGAATGGACAGGTGCGGTTCGTGGACTTGAG GGCACCGACAGGGATAGCTCAGCCCTTGACGACAATGGGTTCTGTTGTCG ACCAGATTGAGATGCTACCGAATGGGAGGGGCTTGTTAGTGAGTGATCGT TTGGGTGCCCTGCGTTTGCTCGACCTGCGTCTTGTGTCCTCCCTACCTGG TGCTGGTGCTGCTGGTGCTGCTGGTGGCTTGGCTTCGACGAGGACAACGA CCGCCTACCTACGTGACTTCCCCGCTCCCCGCATGTCCAATACTCCTGCG AGCACTGGCTTCGTCCTCGACCGCGTAGATGGCTCCCTCGTTCTCACCCT CACCACCCGAGGGCAGCTTCGCACCTATGACTTGAATGCACCGCAAAGGG AAGAGGAGTGGAAAGATGGGAGGCGGACCCATGTGTGTGTCGCCGACATG CTTCCGCTTCTCTCTTCGGGATTTGTGAATGATGCCGCACTTACTATACC TGCTACCACTGGTGCTGCTGCGCCGCCGCGCTTCTTTTTGGCTCGTCGTT GGGCAGGAGAGGGGTGGGATGTTTCGGGGAGAGGGCGGGAGGAATCGGGC AGTCTTATCGGGAATGGGATTGTCGACGTGTGGCCGTCGAAGCTGGTATG TGGGGATAGGACGTCAGGGCGCATACGGCAGTTGCGGCTGCAGAGGGAGA GTTGCGGCCGTGAGAAGGAAGGATAGGATGGAGAAAGAGAGGAAATTCGT GT back to topprotein sequence of jgi.p|Nanoce1779_2|201634 >mRNA_8105-protein ID=mRNA_8105-protein|Name=jgi.p|Nanoce1779_2|201634|organism=Nannochloropsis oceanica|type=polypeptide|length=709bp MPTLSPLYISTGYERVGHGHERLPDVATCSYAAAMKSGDCSTRGGRRDGG RGGRGSGRVDSSREQKHKDSAAAPGNGRRRRSRGIDPGAFELQLEEQRQR QQQRREGGNGGGERGEDNGGGSAIGEQRTSSVKSGPHNTTPPSISAPSSS DQQRSEQRRPQSLIRGFQYDEARGRYFPTSSPFFSSSSSSEPFRPPKNLR GASSLSTLPASASAFSSLSTSSFSKGAPFVCVNFTRRLREREWRHGQQQL HMGSLHRLLHLSTSTDLGQEGTLEDIDVAGGGVVTGARNGMLHVSALPLS SDEFPRRWPILSFHSSVVRVRWRVGRQGELPCLLAVATMGTAAGKAAVTV CKLQGESSEEGIGHGEGGGSDGGQGGRRGWMGSERLIREDRFPLDARDVW GVEWEPGQGRRLLPCLSHGPLLVVDVEARRQLRHSFRLPSDCFAACWSTG GESSNGSSNSSSSEAEEGVFLGLRNGQVRFVDLRAPTGIAQPLTTMGSVV DQIEMLPNGRGLLVSDRLGALRLLDLRLVSSLPGAGAAGAAGGLASTRTT TAYLRDFPAPRMSNTPASTGFVLDRVDGSLVLTLTTRGQLRTYDLNAPQR EEEWKDGRRTHVCVADMLPLLSSGFVNDAALTIPATTGAAAPPRFFLARR WAGEGWDVSGRGREESGSLIGNGIVDVWPSKLVCGDRTSGRIRQLRLQRE SCGREKEG* back to topmRNA from alignment at scaffold_25:170474..172933+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8105 ID=mRNA_8105|Name=jgi.p|Nanoce1779_2|201634|organism=Nannochloropsis oceanica|type=mRNA|length=2460bp|location=Sequence derived from alignment at scaffold_25:170474..172933+ (Nannochloropsis oceanica) TTGACATTTAAAGATTCGCGTCGTCCACCAGCCCATTTAACCTCCCCTCC
CGAATCGCTACTACGTGTATCACTCCAGCAGTTTTCTATTATCTCCCTCA
TGCCCACCCTTTCTCCTTTATACATCTCCACGGGTTATGAACGAGTTGGT
CATGGACACGAGAGACTGCCTGACGTGGCGACGTGCTCATATGCTGCGGC
CATGAAAAGCGGAGATTGTAGCACGAGGGGAGGTCGGCGAGATGGAGGGC
GAGGCGGCAGGGGCAGTGGGCGTGTAGACTCCTCACGCGAGCAAAAGCAC
AAAGACTCGGCCGCGGCACCAGGCAATGGGCGGCGGAGGCGCAGCAGAGG
CATCGATCCTGGTGCATTTGAGCTGCAGCTGGAGGAGCAGCGGCAGAGAC
AACAGCAGCGACGAGAGGGAGGAAATGGAGGCGGAGAACGAGGAGAAGAT
AACGGAGGAGGAAGTGCAATCGGGGAACAGCGCACAAGCTCTGTTAAATC
AGGCCCGCATAACACTACACCACCGTCAATCTCCGCTCCCTCATCCTCCG
ACCAGCAGCGATCGGAGCAGCGTCGCCCTCAGTCATTAATTCGAGGTACG
GCTTGTACAAAAAAAGGGTCACTGCGCGGCTCCGCAAATCGTATAGCTTT
TCTTTGAGCCACACGTTCTGGAGAAGTGGGCGTATACTTATTACCATCTT
TTCAAAATGAAACACATTTCTGCGTGCTTTGGCGCTCCTCTTCGTCTCTT
TTTCAAGGTACTCATTCTTTCCGTCATTCCTTCCTATTTGCGCCATTTCC
CAGGCTTCCAATACGACGAGGCCCGCGGCCGGTACTTTCCTACCTCTTCC
CCCTTCTTCTCCTCTTCTTCTTCTTCAGAGCCCTTTCGGCCTCCCAAAAA
TCTTCGTGGCGCCTCTTCCTTATCGACGCTACCAGCATCCGCCTCCGCCT
TCTCCTCATTATCCACCTCCTCCTTTTCGAAAGGAGCGCCATTTGTCTGT
GTAAACTTCACCCGCCGCCTGCGCGAACGAGAATGGCGACACGGACAACA
GCAGCTTCACATGGGATCACTTCACAGGCTCCTTCACCTGAGCACCTCCA
CAGATCTAGGCCAGGAAGGCACATTGGAGGACATCGATGTGGCGGGGGGT
GGAGTAGTAACAGGAGCTCGCAACGGCATGCTACACGTGAGCGCCCTTCC
CCTATCATCCGACGAATTCCCTCGGCGCTGGCCTATTTTGAGCTTTCACT
CTTCAGTGGTACGCGTTCGTTGGCGGGTCGGCAGGCAGGGAGAGCTGCCG
TGTCTCCTGGCGGTTGCGACGATGGGAACGGCGGCGGGAAAGGCGGCTGT
AACGGTGTGCAAGCTCCAGGGGGAAAGTAGTGAAGAAGGAATCGGGCATG
GAGAAGGAGGAGGAAGCGATGGAGGACAGGGAGGAAGAAGAGGATGGATG
GGAAGCGAAAGGCTAATTCGAGAGGATCGATTTCCGTTGGATGCTCGGGA
TGTGTGGGGGGTGGAGTGGGAGCCGGGGCAAGGGCGGCGCCTCCTTCCCT
GCCTCTCCCATGGGCCTTTGCTCGTGGTGGACGTTGAGGCGCGTCGGCAG
TTACGGCATTCTTTTCGGTTGCCGAGCGATTGTTTTGCAGCATGTTGGAG
CACTGGTGGCGAAAGCAGCAATGGCAGCAGCAACAGTAGCAGCAGTGAGG
CAGAGGAGGGTGTGTTTTTGGGGCTGAGGAATGGACAGGTGCGGTTCGTG
GACTTGAGGGCACCGACAGGGATAGCTCAGCCCTTGACGACAATGGGTTC
TGTTGTCGACCAGATTGAGATGCTACCGAATGGGAGGGGCTTGTTAGTGA
GTGATCGTTTGGGTGCCCTGCGTTTGCTCGACCTGCGTCTTGTGTCCTCC
CTACCTGGTGCTGGTGCTGCTGGTGCTGCTGGTGGCTTGGCTTCGACGAG
GACAACGACCGCCTACCTACGTGACTTCCCCGCTCCCCGCATGTCCAATA
CTCCTGCGAGCACTGGCTTCGTCCTCGACCGCGTAGATGGCTCCCTCGTT
CTCACCCTCACCACCCGAGGGCAGCTTCGCACCTATGACTTGAATGCACC
GCAAAGGGAAGAGGAGTGGAAAGATGGGAGGCGGACCCATGTGTGTGTCG
CCGACATGCTTCCGCTTCTCTCTTCGGGATTTGTGAATGATGCCGCACTT
ACTATACCTGCTACCACTGGTGCTGCTGCGCCGCCGCGCTTCTTTTTGGC
TCGTCGTTGGGCAGGAGAGGGGTGGGATGTTTCGGGGAGAGGGCGGGAGG
AATCGGGCAGTCTTATCGGGAATGGGATTGTCGACGTGTGGCCGTCGAAG
CTGGTATGTGGGGATAGGACGTCAGGGCGCATACGGCAGTTGCGGCTGCA
GAGGGAGAGTTGCGGCCGTGAGAAGGAAGGATAGGATGGAGAAAGAGAGG
AAATTCGTGT back to topCoding sequence (CDS) from alignment at scaffold_25:170474..172933+ >mRNA_8105 ID=mRNA_8105|Name=jgi.p|Nanoce1779_2|201634|organism=Nannochloropsis oceanica|type=CDS|length=4254bp|location=Sequence derived from alignment at scaffold_25:170474..172933+ (Nannochloropsis oceanica) ATGCCCACCCTTTCTCCTTTATACATCTCCACGGGTTATGAACGAGTTGG TCATGGACACGAGAGACTGCCTGACGTGGCGACGTGCTCATATGCTGCGG CCATGAAAAGCGGAGATTGTAGCACGAGGGGAGGTCGGCGAGATGGAGGG CGAGGCGGCAGGGGCAGTGGGCGTGTAGACTCCTCACGCGAGCAAAAGCA CAAAGACTCGGCCGCGGCACCAGGCAATGGGCGGCGGAGGCGCAGCAGAG GCATCGATCCTGGTGCATTTGAGCTGCAGCTGGAGGAGCAGCGGCAGAGA CAACAGCAGCGACGAGAGGGAGGAAATGGAGGCGGAGAACGAGGAGAAGA TAACGGAGGAGGAAGTGCAATCGGGGAACAGCGCACAAGCTCTGTTAAAT CAGGCCCGCATAACACTACACCACCGTCAATCTCCGCTCCCTCATCCTCC GACCAGCAGCGATCGGAGCAGCGTCGCCCTCAGTCATTAATTCGAGGCTT CCAATACGACGAGGCCCGCGGCCGGTACTTTCCTACCTCTTCCCCCTTCT TCTCCTCTTCTTCTTCTTCAGAGCCCTTTCGGCCTCCCAAAAATCTTCGT GGCGCCTCTTCCTTATCGACGCTACCAGCATCCGCCTCCGCCTTCTCCTC ATTATCCACCTCCTCCTTTTCGAAAGGAGCGCCATTTGTCTGTGTAAACT TCACCCGCCGCCTGCGCGAACGAGAATGGCGACACGGACAACAGCAGCTT CACATGGGATCACTTCACAGGCTCCTTCACCTGAGCACCTCCACAGATCT AGGCCAGGAAGGCACATTGGAGGACATCGATGTGGCGGGGGGTGGAGTAG TAACAGGAGCTCGCAACGGCATGCTACACGTGAGCGCCCTTCCCCTATCA TCCGACGAATTCCCTCGGCGCTGGCCTATTTTGAGCTTTCACTCTTCAGT GGTACGCGTTCGTTGGCGGGTCGGCAGGCAGGGAGAGCTGCCGTGTCTCC TGGCGGTTGCGACGATGGGAACGGCGGCGGGAAAGGCGGCTGTAACGGTG TGCAAGCTCCAGGGGGAAAGTAGTGAAGAAGGAATCGGGCATGGAGAAGG AGGAGGAAGCGATGGAGGACAGGGAGGAAGAAGAGGATGGATGGGAAGCG AAAGGCTAATTCGAGAGGATCGATTTCCGTTGGATGCTCGGGATGTGTGG GGGGTGGAGTGGGAGCCGGGGCAAGGGCGGCGCCTCCTTCCCTGCCTCTC CCATGGGCCTTTGCTCGTGGTGGACGTTGAGGCGCGTCGGCAGTTACGGC ATTCTTTTCGGTTGCCGAGCGATTGTTTTGCAGCATGTTGGAGCACTGGT GGCGAAAGCAGCAATGGCAGCAGCAACAGTAGCAGCAGTGAGGCAGAGGA GGGTGTGTTTTTGGGGCTGAGGAATGGACAGGTGCGGTTCGTGGACTTGA GGGCACCGACAGGGATAGCTCAGCCCTTGACGACAATGGGTTCTGTTGTC GACCAGATTGAGATGCTACCGAATGGGAGGGGCTTGTTAGTGAGTGATCG TTTGGGTGCCCTGCGTTTGCTCGACCTGCGTCTTGTGTCCTCCCTACCTG GTGCTGGTGCTGCTGGTGCTGCTGGTGGCTTGGCTTCGACGAGGACAACG ACCGCCTACCTACGTGACTTCCCCGCTCCCCGCATGTCCAATACTCCTGC GAGCACTGGCTTCGTCCTCGACCGCGTAGATGGCTCCCTCGTTCTCACCC TCACCACCCGAGGGCAGCTTCGCACCTATGACTTGAATGCACCGCAAAGG GAAGAGGAGTGGAAAGATGGGAGGCGGACCCATGTGTGTGTCGCCGACAT GCTTCCGCTTCTCTCTTCGGGATTTGTGAATGATGCCGCACTTACTATAC CTGCTACCACTGGTGCTGCTGCGCCGCCGCGCTTCTTTTTGGCTCGTCGT TGGGCAGGAGAGGGGTGGGATGTTTCGGGGAGAGGGCGGGAGGAATCGGG CAGTCTTATCGGGAATGGGATTGTCGACGTGTGGCCGTCGAAGCTGGTAT GTGGGGATAGGACGTCAGGGCGCATACGGCAGTTGCGGCTGCAGAGGGAG AGTTGCGGCCGTGAGAAGGAAGGATAGATGCCCACCCTTTCTCCTTTATA CATCTCCACGGGTTATGAACGAGTTGGTCATGGACACGAGAGACTGCCTG ACGTGGCGACGTGCTCATATGCTGCGGCCATGAAAAGCGGAGATTGTAGC ACGAGGGGAGGTCGGCGAGATGGAGGGCGAGGCGGCAGGGGCAGTGGGCG TGTAGACTCCTCACGCGAGCAAAAGCACAAAGACTCGGCCGCGGCACCAG GCAATGGGCGGCGGAGGCGCAGCAGAGGCATCGATCCTGGTGCATTTGAG CTGCAGCTGGAGGAGCAGCGGCAGAGACAACAGCAGCGACGAGAGGGAGG AAATGGAGGCGGAGAACGAGGAGAAGATAACGGAGGAGGAAGTGCAATCG GGGAACAGCGCACAAGCTCTGTTAAATCAGGCCCGCATAACACTACACCA CCGTCAATCTCCGCTCCCTCATCCTCCGACCAGCAGCGATCGGAGCAGCG TCGCCCTCAGTCATTAATTCGAGGCTTCCAATACGACGAGGCCCGCGGCC GGTACTTTCCTACCTCTTCCCCCTTCTTCTCCTCTTCTTCTTCTTCAGAG CCCTTTCGGCCTCCCAAAAATCTTCGTGGCGCCTCTTCCTTATCGACGCT ACCAGCATCCGCCTCCGCCTTCTCCTCATTATCCACCTCCTCCTTTTCGA AAGGAGCGCCATTTGTCTGTGTAAACTTCACCCGCCGCCTGCGCGAACGA GAATGGCGACACGGACAACAGCAGCTTCACATGGGATCACTTCACAGGCT CCTTCACCTGAGCACCTCCACAGATCTAGGCCAGGAAGGCACATTGGAGG ACATCGATGTGGCGGGGGGTGGAGTAGTAACAGGAGCTCGCAACGGCATG CTACACGTGAGCGCCCTTCCCCTATCATCCGACGAATTCCCTCGGCGCTG GCCTATTTTGAGCTTTCACTCTTCAGTGGTACGCGTTCGTTGGCGGGTCG GCAGGCAGGGAGAGCTGCCGTGTCTCCTGGCGGTTGCGACGATGGGAACG GCGGCGGGAAAGGCGGCTGTAACGGTGTGCAAGCTCCAGGGGGAAAGTAG TGAAGAAGGAATCGGGCATGGAGAAGGAGGAGGAAGCGATGGAGGACAGG GAGGAAGAAGAGGATGGATGGGAAGCGAAAGGCTAATTCGAGAGGATCGA TTTCCGTTGGATGCTCGGGATGTGTGGGGGGTGGAGTGGGAGCCGGGGCA AGGGCGGCGCCTCCTTCCCTGCCTCTCCCATGGGCCTTTGCTCGTGGTGG ACGTTGAGGCGCGTCGGCAGTTACGGCATTCTTTTCGGTTGCCGAGCGAT TGTTTTGCAGCATGTTGGAGCACTGGTGGCGAAAGCAGCAATGGCAGCAG CAACAGTAGCAGCAGTGAGGCAGAGGAGGGTGTGTTTTTGGGGCTGAGGA ATGGACAGGTGCGGTTCGTGGACTTGAGGGCACCGACAGGGATAGCTCAG CCCTTGACGACAATGGGTTCTGTTGTCGACCAGATTGAGATGCTACCGAA TGGGAGGGGCTTGTTAGTGAGTGATCGTTTGGGTGCCCTGCGTTTGCTCG ACCTGCGTCTTGTGTCCTCCCTACCTGGTGCTGGTGCTGCTGGTGCTGCT GGTGGCTTGGCTTCGACGAGGACAACGACCGCCTACCTACGTGACTTCCC CGCTCCCCGCATGTCCAATACTCCTGCGAGCACTGGCTTCGTCCTCGACC GCGTAGATGGCTCCCTCGTTCTCACCCTCACCACCCGAGGGCAGCTTCGC ACCTATGACTTGAATGCACCGCAAAGGGAAGAGGAGTGGAAAGATGGGAG GCGGACCCATGTGTGTGTCGCCGACATGCTTCCGCTTCTCTCTTCGGGAT TTGTGAATGATGCCGCACTTACTATACCTGCTACCACTGGTGCTGCTGCG CCGCCGCGCTTCTTTTTGGCTCGTCGTTGGGCAGGAGAGGGGTGGGATGT TTCGGGGAGAGGGCGGGAGGAATCGGGCAGTCTTATCGGGAATGGGATTG TCGACGTGTGGCCGTCGAAGCTGGTATGTGGGGATAGGACGTCAGGGCGC ATACGGCAGTTGCGGCTGCAGAGGGAGAGTTGCGGCCGTGAGAAGGAAGG ATAG back to top
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