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Properties
| Property Name | Value |
|---|
| TranscriptId | 579017 |
| Track | FilteredModels2 |
| ProteinId | 578931 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:699505..700731 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2068 ID=mRNA_2068|Name=jgi.p|Nanoce1779_2|578931|organism=Nannochloropsis oceanica|type=mRNA|length=1133bp
GGTTGCCGTAAGTGAGGCGTGATGCTCCTGCTATCTCACTCCACCTCTTT
CCCTTTCGTACCTACTTATCCACGGCAAGCACAGCCGCCCATCCAGCCAT
GGTACCATTACACAGGCGACCCGGCCTCTCTTGCCTCATCGTAGCCACGT
TGATGTCCAGTACGGCAACTGCTTTCAAACAACCTCCCCATCTCGCGCTC
TCATGTCGTCTCAGCCCCTGTCCTCGTCCCATCGGCGTTACTGGTCGAGG
CACCGTCGCATTTCACCGTGCCAAGTTTGTCTACCCCCGCCATTTACCCA
GCGGTTGGACCGTGGCCTTTGCCTCGGCGGATGGCCCTTCGTCTTCCCCC
GCCAAAACACCGCCACCCGCAGGCTACAAGCCCAAACTTTGGGCGTACTA
CCGATCAAGGTCTAAGATTATTGAATGGTATATGCAAGAGCTGGGGGTAG
CATATGACGTTGTACAAATTGACATGGGTGCTATGGGACACAAGGACCCG
GTTTTCATCCGGGACGTCAATCCGTTTGGGAAACTCCCCGTTATCACTAT
GGCAAACGGCTCCCCGCTCATCGAATCGGGATCACAGCTTTTGTACCTAG
CCGACGTGTTTGACCCCGACGTGACGACCGCTGAAGAACGGGGCGTGGCC
TCTCAGTGGACTCACTTTGCCAACGCTAGTTTGGGCCCCGCCATATTTAT
GAAAGAGCAACGCGACGCCGGCGTAATGGACAAGCTGTTTGCCGTCCTGG
ACCAGGAACTTGCATCCAAATCTTACCTCCAAGGAGAACGGTTCAGCGTG
AGTGATGTGGCGGTCGGGTCTTATTTATCCTATATTCCCGTATTTTTCCC
TGGACAGATTTTGCTCGAACCTTACAAGCATTTGCAAGCGTATATTGGCC
GAGTCACGACTCGGCCGGCATTTAAGAACACTGTGGGTGCCCCTCCGCCC
TCAACGGCATGAATGGGGCTAGCCGCTCCGGGACAGATGAGAAACAGATG
ACAACTTTAACATGAAATAAGAATCGACAGTAACATGAAACCACATATAA
AGTAAGAAGCTAAAAAATCAAATAGATTAGACAATTTCTAGGGGTACTAT
GTAAAGTATATAATTTCCTTTGCTTCTTACCGT back to topprotein sequence of jgi.p|Nanoce1779_2|578931 >mRNA_2068-protein ID=mRNA_2068-protein|Name=jgi.p|Nanoce1779_2|578931|organism=Nannochloropsis oceanica|type=polypeptide|length=288bp
MVPLHRRPGLSCLIVATLMSSTATAFKQPPHLALSCRLSPCPRPIGVTGR
GTVAFHRAKFVYPRHLPSGWTVAFASADGPSSSPAKTPPPAGYKPKLWAY
YRSRSKIIEWYMQELGVAYDVVQIDMGAMGHKDPVFIRDVNPFGKLPVIT
MANGSPLIESGSQLLYLADVFDPDVTTAEERGVASQWTHFANASLGPAIF
MKEQRDAGVMDKLFAVLDQELASKSYLQGERFSVSDVAVGSYLSYIPVFF
PGQILLEPYKHLQAYIGRVTTRPAFKNTVGAPPPSTA* back to topmRNA from alignment at scaffold_4:699505..700731+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2068 ID=mRNA_2068|Name=jgi.p|Nanoce1779_2|578931|organism=Nannochloropsis oceanica|type=mRNA|length=1227bp|location=Sequence derived from alignment at scaffold_4:699505..700731+ (Nannochloropsis oceanica)
GGTTGCCGTAAGTGAGGCGTGATGCTCCTGCTATCTCACTCCACCTCTTT
CCCTTTCGTACCTACTTATCCACGGCAAGCACAGCCGCCCATCCAGCCAT
GGTACCATTACACAGGCGACCCGGCCTCTCTTGCCTCATCGTAGCCACGT
TGATGTCCAGTACGGCAACTGCTTTCAAACAACCTCCCCATCTCGCGCTC
TCATGTCGTCTCAGCCCCTGTCCTCGTCCCATCGGCGTTACTGGTCGAGG
CACCGTCGCATTTCACCGTGCCAAGTTTGTCTACCCCCGCCATTTACCCA
GCGGTTGGACCGTGGCCTTTGCCTCGGCGGATGGCCCTTCGTCTTCCCCC
GCCAAAACACCGCCACCCGCAGGCTACAAGCCCAAACTTTGGGCGTACTA
CCGATCAAGGTCTAAGATTATTGAATGGTATATGCAAGAGCTGGGGGTAG
CATATGACGTTGTACAAATTGACATGGGTGCTATGGGACACAAGGACCCG
GTTTTCATCCGGGACGTCAATCCGTTTGGTAAGTGCACGGAGTGTCTAAT
TAGTCGACCTTTTACATTCATTCTTATTGCTTACACTATACTGCCATCCT
CACTGCCTGCTCTTCTCACAAGGGAAACTCCCCGTTATCACTATGGCAAA
CGGCTCCCCGCTCATCGAATCGGGATCACAGCTTTTGTACCTAGCCGACG
TGTTTGACCCCGACGTGACGACCGCTGAAGAACGGGGCGTGGCCTCTCAG
TGGACTCACTTTGCCAACGCTAGTTTGGGCCCCGCCATATTTATGAAAGA
GCAACGCGACGCCGGCGTAATGGACAAGCTGTTTGCCGTCCTGGACCAGG
AACTTGCATCCAAATCTTACCTCCAAGGAGAACGGTTCAGCGTGAGTGAT
GTGGCGGTCGGGTCTTATTTATCCTATATTCCCGTATTTTTCCCTGGACA
GATTTTGCTCGAACCTTACAAGCATTTGCAAGCGTATATTGGCCGAGTCA
CGACTCGGCCGGCATTTAAGAACACTGTGGGTGCCCCTCCGCCCTCAACG
GCATGAATGGGGCTAGCCGCTCCGGGACAGATGAGAAACAGATGACAACT
TTAACATGAAATAAGAATCGACAGTAACATGAAACCACATATAAAGTAAG
AAGCTAAAAAATCAAATAGATTAGACAATTTCTAGGGGTACTATGTAAAG
TATATAATTTCCTTTGCTTCTTACCGT back to topCoding sequence (CDS) from alignment at scaffold_4:699505..700731+ >mRNA_2068 ID=mRNA_2068|Name=jgi.p|Nanoce1779_2|578931|organism=Nannochloropsis oceanica|type=CDS|length=1728bp|location=Sequence derived from alignment at scaffold_4:699505..700731+ (Nannochloropsis oceanica)
ATGGTACCATTACACAGGCGACCCGGCCTCTCTTGCCTCATCGTAGCCAC
GTTGATGTCCAGTACGGCAACTGCTTTCAAACAACCTCCCCATCTCGCGC
TCTCATGTCGTCTCAGCCCCTGTCCTCGTCCCATCGGCGTTACTGGTCGA
GGCACCGTCGCATTTCACCGTGCCAAGTTTGTCTACCCCCGCCATTTACC
CAGCGGTTGGACCGTGGCCTTTGCCTCGGCGGATGGCCCTTCGTCTTCCC
CCGCCAAAACACCGCCACCCGCAGGCTACAAGCCCAAACTTTGGGCGTAC
TACCGATCAAGGTCTAAGATTATTGAATGGTATATGCAAGAGCTGGGGGT
AGCATATGACGTTGTACAAATTGACATGGGTGCTATGGGACACAAGGACC
CGGTTTTCATCCGGGACGTCAATCCGTTTGGGAAACTCCCCGTTATCACT
ATGGCAAACGGCTCCCCGCTCATCGAATCGGGATCACAGCTTTTGTACCT
AGCCGACGTGTTTGACCCCGACGTGACGACCGCTGAAGAACGGGGCGTGG
CCTCTCAGTGGACTCACTTTGCCAACGCTAGTTTGGGCCCCGCCATATTT
ATGAAAGAGCAACGCGACGCCGGCGTAATGGACAAGCTGTTTGCCGTCCT
GGACCAGGAACTTGCATCCAAATCTTACCTCCAAGGAGAACGGTTCAGCG
TGAGTGATGTGGCGGTCGGGTCTTATTTATCCTATATTCCCGTATTTTTC
CCTGGACAGATTTTGCTCGAACCTTACAAGCATTTGCAAGCGTATATTGG
CCGAGTCACGACTCGGCCGGCATTTAAGAACACTGTGGGTGCCCCTCCGC
CCTCAACGGCATGAATGGTACCATTACACAGGCGACCCGGCCTCTCTTGC
CTCATCGTAGCCACGTTGATGTCCAGTACGGCAACTGCTTTCAAACAACC
TCCCCATCTCGCGCTCTCATGTCGTCTCAGCCCCTGTCCTCGTCCCATCG
GCGTTACTGGTCGAGGCACCGTCGCATTTCACCGTGCCAAGTTTGTCTAC
CCCCGCCATTTACCCAGCGGTTGGACCGTGGCCTTTGCCTCGGCGGATGG
CCCTTCGTCTTCCCCCGCCAAAACACCGCCACCCGCAGGCTACAAGCCCA
AACTTTGGGCGTACTACCGATCAAGGTCTAAGATTATTGAATGGTATATG
CAAGAGCTGGGGGTAGCATATGACGTTGTACAAATTGACATGGGTGCTAT
GGGACACAAGGACCCGGTTTTCATCCGGGACGTCAATCCGTTTGGGAAAC
TCCCCGTTATCACTATGGCAAACGGCTCCCCGCTCATCGAATCGGGATCA
CAGCTTTTGTACCTAGCCGACGTGTTTGACCCCGACGTGACGACCGCTGA
AGAACGGGGCGTGGCCTCTCAGTGGACTCACTTTGCCAACGCTAGTTTGG
GCCCCGCCATATTTATGAAAGAGCAACGCGACGCCGGCGTAATGGACAAG
CTGTTTGCCGTCCTGGACCAGGAACTTGCATCCAAATCTTACCTCCAAGG
AGAACGGTTCAGCGTGAGTGATGTGGCGGTCGGGTCTTATTTATCCTATA
TTCCCGTATTTTTCCCTGGACAGATTTTGCTCGAACCTTACAAGCATTTG
CAAGCGTATATTGGCCGAGTCACGACTCGGCCGGCATTTAAGAACACTGT
GGGTGCCCCTCCGCCCTCAACGGCATGA back to top
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