jgi.p|Nanoce1779_2|586139, mRNA_4012 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|586139
Unique Name	mRNA_4012
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5014
Alignment location	scaffold_8:631449..636462 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	586225
Track	FilteredModels2
ProteinId	586139

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_8	supercontig	scaffold_8:631449..636462 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|586139	gene_4012	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|586139	mRNA_4012-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_4012	CDS_4012	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_8:631449..636462+
coding sequence from alignment at scaffold_8:631449..636462+

mRNA sequence

>mRNA_4012 ID=mRNA_4012|Name=jgi.p|Nanoce1779_2|586139|organism=Nannochloropsis oceanica|type=mRNA|length=5014bp
ACAGAACTTGAGCGCGCACGCGTGGTTTGAGGTTAGTTGACTCGGGGGCG
CACAAGCTGTCCTCATCTGTCGGCCCGTCTCCAGACATCATCAGCAAGCA
GTAGCGCAGCACAAAGCAGAGGCTCATCACAAGACAACTGGCATCCAATT
ATGTCGCTGCTGAAGCAAGTCGAAGACAAGAATGCCAATTTGGCATGGTC
GCCCGTGCCGGACCAGGGGAACTTGGTGGCGCTGGGGACGAGGGACGGAG
GCGGGGGAGGCTTTGACGACTACGGGGGCGAGTTGGAGATCCATAAGCTA
GACTTTGGCATAGGCGACACTCGGACGAAAGTTATGGGCACTGTGCGCAC
CAATGGACGATTCACGGCCTTAGCCTGGTCGGCGTTGAATAATAAACGGG
CGGATTTCGCGTTGGGTGTTGTGGCCGGCGGGTTGGCGGATGGCACCGTG
GCCATTTGGGACCCAGCTAAGCTGGTCGCCAACCACCCGCAGCCTCGTAT
CGCGGCCGTCCAGCGGCATACTGGCCCTGTGAATGGTCTACATTTCAATC
CGAGTGCGACATCTTCACACTTGCTGGCCTCGGGTGGGGCGGACAATGAG
GTGTTTGTCTATGCGTTGGATCGGCCGGACACACCCAATGTCTTTATCCC
TGCCCCCGCGCCCAACACCGCCAAGCACACTGCCGAGGTGAGCAAAGTGG
CCTGGAACCCACAGGTTCCTCATATTCTTGCCAGTTGCTCTGGGAACGGT
TCAAGCATTGTGTGGGATTTGCGGCAGAAGAAGCCCTATTGCGAGCTGCG
TGACCCGGCCCGTGGACCCGTGGCGGATATTGCCTGGAATCCTGACGAGG
GCCTGCACATGGTCACGGCCTCAGGGGACGACAACAATCCAGTCATCCGC
CTGTGGGACTTGCGTAGCTCCACCACTCACCCCTTGGCCACGCTCAAGGG
CCATGACCAGGGCCTGCTATCCGTTTCTTGGTGCCCATTCGATTCGAGCT
TCCTCCTCTCTACCGGCCGTGACAATCGCACCCTCTTGTGGGACCTTCAT
CACGCCAGTCCCATCTACGAACTCCCCTCTTCCATCCCTGAGGCAGGCTC
CACGGGCTACGGCGGCTACGGGGCCTCGCAGCAGCGACGATACAACGCCA
CCTGGTCCCCCATCCTCCCCGCTGTAGTAGGCACCTCATCCTTCAACCGC
ACAGTTGAATTCTACTCTCTGACCGGTGTCCGCTCCACCACAGGTCGTGC
CCCCAAGTGGTTGCGACGCCCGGTTGCGGCCAGCTTTGGTTGGGGTGGGC
AGCTCGTGCACGTCGATAATGGCGCTGCTGCCAAGACTGCAAAACCTGCT
GGGGCTCCGGGCGCTCCGAGGGGAGGACCGGGAGGGAAAAAGCCTATGGT
GCATTTGAGGGGGTTGGTGGAGGATACGGAGTTGGTGGCAGCGTCGAAGG
AGTTCAAGGAGATAGTATTGAGTCAGGATTATCCGTCGTTTTGTGCGGCG
AGGGCGAGTGCCGCCAAGACGGGGGAAGAACGGCAGGTATGGGCAGTATT
GCAGACCATTGTAGACAAGGAGAGCAAGAGCCAGTTGAATCACACCCTTG
GATACGATGGGGCGTCTATCGCTGCTGCTGCTGCGGCCGCTACTGCTGCA
TTACGGAGCAAGGCCAAAACACCATCCCCTGCTGGTGCTGCTCCTCCTAT
TGCCTCCACCAGTCACTCTCGCTCCTCGTCAACGGCGAGCGGAGGGCTGG
GAGCGGCGGAGGGATGGGGAGATCTTGGAGATGAGGTGGACGGATTCAGT
GCACCGGCATCTGGGCCGGGTGTCGAGACTGTCACGGGCACGCTCGCGGG
CCTGCGAATGGCGGGAAAGGCGACGCCCTACCCTGAGGCGGAGGCACATG
TTAAGAGGGCATTGTTGGCCGGGGGGTTGGAGGCAGCGGTGCAGGCTTGT
TTGGAGCACGATTTGGTTGCAGAGGCCTTGTTGCTTGCGTCAGCTCCTGA
TGCCGATCCGGGGGTCTGGGCTCGGACGAAGGATGCATATGTAAGTCGAC
ATGCGGGGCAGCGGCCGTTGTTGAGAATTATTGATGCTGTTCTAAAGAGT
GACATGTCGGAGTTAGTCGGGTCGTCGGATTTGATTCAGTGGCAGGAAAC
CCTGGCTTTGCTGAATACGTATACGACGGGGGAAACATTTGCGGGGTTGA
CTGAGCTACTGGGCACGCGCCTGGAGACGGAGAGACGGGATCGAGCGAGT
GCGACATTATGCTACTTGTGCTCGTTGAACATAGGGAAGGCGGTGCGTTT
TTGGGTTGATACGCTGCAAGAGGCCAAGCAGCGGCTGGGGCGTACGGATA
CACTGGCATTGCACCACTTTGTGGAGAAAGTGACCATTTGCCTGTCCGCA
GCGGAGCAGCAGGGGCAGGCCCCCGTCTTGCCTGCGGATGTCGCGGTTCT
CTTTACGGAGTATGCAGAGATCTTGGCAGCACAAGGCGAGCTGGACATGG
CTTACACATTTGTCAAAAATATCCCTGACCCCTCTACCGCTCTGCTTAAG
GACCGTCTCTTCCGCGCTTCTATCACCTTGCAGGCAAACGAGCCGGAGCC
TGCCGGTCCATTTGACATCAAGCACATCGGTATGACGCCCGCCTCGCCGA
CCCGGACCGCTGTCCCGGCCACCGTTCCAGTCGGTCAACACCAAGAGCAC
GTCGTCACTGCAGCTCCTTCCGCATATGGCCAACAGAAACCCTCACTAGG
AGCTGGAGCCTCAGGTGCAGGAGCAGCAGCTGCATCCCCTCATGCTCTCC
CCCCCCACTGGGTGGCTGTCACGGACCCAAGCTCCGGTCAAGTGTATTTC
TACAATGAGTCGACCAGAGAAACAAGCTGGGAGAAGCCCGTGGTTGCAGC
GGCACCGATCCATGTTCCCGCTGCCGTCCCTGCCGCCCAAGCTTCGTACG
GAGGCATGCCCCCCACTCAGCAGCAGCAATCGCAAATGCAGCAGCCCGCG
CACCACCCGGCCACGTTGTCGGGCACCAAGCCCCTTGATTACTACGCGGA
CTCCTTCACTTCCTCCCACGGAAATGCCGCCCTCATGCAGAAATACGGGA
ACGTTGGATCGATGCCGCAGCAACCACACATACCGCAGCAGCAACAGCAA
CAGCAATTTGGGATGGAGCAGCAGCAGCCGTCGATGGTAGGGGGAATTGG
GATGAACATGGGCATGGGTCAACCCACTGTCTTCCAACCCAACAAGGTGC
CTCAAAATCCCAATCCCACGCCCGTCGCCGCCCCCACCAAGCCCCCTTCT
CCCGTAATGCCCGCTGCTCCTGCCGAGCCTCCCGCCGAGGCGTTGCCCAC
TTTGGCGAATCTAAACAATTTGGTGTCCGCGCTTGCGGCCTCGTCTGCTT
TGTCCGCCGGGGATAAGCGCCAATTGAACGACGTGACGAAGGGCATTGCT
GCTCTCTCTAATAAGTTGGGATTGGGAGAGGTGGGCCCTGACGTGCTGGT
CCGTGTCGGACAATTCGCGGATTGTTGTTTCAATCGGGATTTTGCCTCAG
CTACGGCGATTCAGTCTGAGTTTACGCTCAGCATTTGGGACACGCAGAAG
GAGTGGATAAAGCCGTTGAAGCTCCTCATCATGCTCGGCAAGAAGGGATT
TTAGGCTGGCGGGCATGAAAGAGGAGATGGCGGAGAGGTAGATAGCAGTA
TGTCTGCCTTGTGTCGTGCGTGCTCGTACGAGTCCGCGTTGAATGGAGAG
GGAGGCGGAGTATAGCAGGATAGAGGTTCTAATTTGAGTGGATGAGGAAG
TCATAAAAGTGAAGGCGTTTCGCCTTCGCATAAGAAACAACTCAAAATCT
GCCTGCAAAGTCAAGGAAACAAACATACAAAAAGATAAGAAACAAAAACA
AATGTTGGGAGTAGGGTGTGCGCGCGTGCGGGAGGGGAGGTTATCTTCAT
GGGCCAACGCCGTCCTCTGGCTTCTACGGCACAACCCAAGCCGAGCAGCG
CTAGTCAAATACCCACACCATCCTCGCCCCCTACGTTATCATGCCACTCT
GCAGGAAGAGTACACGCAAGCTTGGTCTTGGCAGGAAAAGCCCCCCCCCT
GGACGCTCAGTCAAGCAAGCCAGGAGTGATCATGGCTACGAGGACCCCGC
AGCAAGAAGACGACGAGACGACGGCCGTATCGGAGGTGGACGTGGAGAGC
GAATTAAGCCAGCACACCCTGGCCATGTTGAAGGAGCACTTGGCCGAGAA
AGAGCACGAGGGCCCTGCTCACCTCTTAGGCAAAGAGAATTACGGCCTTG
CCCAATTCTGGTATTCAGAGGAGACTGCGAAGGCGCTCTTGATGGAAGCC
CTATCCCACGTAACGGATGGTGGTGTAGTGGCCGTATTAAGTGCCCCCTC
TCTAATGGTGCCGGCACAGGAGTTAGAGGGCGGCAAGCATTTTTCTAAGC
TGCAGCTTTTTGAGATTGATGAACGTTTCGGAGTCCAATTTCCCGACAAT
TTCTATCACTACGATTATAATGCAGCGACCGTCCTCCCCACCAAAATGTT
GAGGCAAGTGACGGCCTTTGTGATCGACCCTCCACGCCTGAATATTGATA
CGTTGAAAGAGTATTTTATTTCAACACGTCTTCTCGCCAAACCGTGCACG
GACGGCAGTGTGCCGCCATGCATTGTGGTGACGGCTGCTGTACTCGAGGA
CGCTGTGAGGGAGGAGTTCGGGCTGCGACCAGTACTAAAATTTGAGATAA
TCCACACTAGCAAGCTAGGAAATCCGCTGCAGGCGTATACAAACTACCCG
CCCAAGGTCTTAGACGCCTCTTCTTGGCAGGAGACTGTATGAGTGAAGGA
GAGAAAAAGAAGTGAAGACGCAGCTCACAAGTCATGCGTGTCTTTTGCTA
TTTTGGCTTGTGGACTTCAATAATATGTTGTACCTGCGCCAGGCGGAAGT
TTTTCGATTTCAACTTTTGTAAAATAAAATATTGAATGAGAAGGAGCGAA
AGGAAAAAAGCATG

protein sequence of jgi.p|Nanoce1779_2|586139

>mRNA_4012-protein ID=mRNA_4012-protein|Name=jgi.p|Nanoce1779_2|586139|organism=Nannochloropsis oceanica|type=polypeptide|length=1168bp
MSLLKQVEDKNANLAWSPVPDQGNLVALGTRDGGGGGFDDYGGELEIHKL
DFGIGDTRTKVMGTVRTNGRFTALAWSALNNKRADFALGVVAGGLADGTV
AIWDPAKLVANHPQPRIAAVQRHTGPVNGLHFNPSATSSHLLASGGADNE
VFVYALDRPDTPNVFIPAPAPNTAKHTAEVSKVAWNPQVPHILASCSGNG
SSIVWDLRQKKPYCELRDPARGPVADIAWNPDEGLHMVTASGDDNNPVIR
LWDLRSSTTHPLATLKGHDQGLLSVSWCPFDSSFLLSTGRDNRTLLWDLH
HASPIYELPSSIPEAGSTGYGGYGASQQRRYNATWSPILPAVVGTSSFNR
TVEFYSLTGVRSTTGRAPKWLRRPVAASFGWGGQLVHVDNGAAAKTAKPA
GAPGAPRGGPGGKKPMVHLRGLVEDTELVAASKEFKEIVLSQDYPSFCAA
RASAAKTGEERQVWAVLQTIVDKESKSQLNHTLGYDGASIAAAAAAATAA
LRSKAKTPSPAGAAPPIASTSHSRSSSTASGGLGAAEGWGDLGDEVDGFS
APASGPGVETVTGTLAGLRMAGKATPYPEAEAHVKRALLAGGLEAAVQAC
LEHDLVAEALLLASAPDADPGVWARTKDAYVSRHAGQRPLLRIIDAVLKS
DMSELVGSSDLIQWQETLALLNTYTTGETFAGLTELLGTRLETERRDRAS
ATLCYLCSLNIGKAVRFWVDTLQEAKQRLGRTDTLALHHFVEKVTICLSA
AEQQGQAPVLPADVAVLFTEYAEILAAQGELDMAYTFVKNIPDPSTALLK
DRLFRASITLQANEPEPAGPFDIKHIGMTPASPTRTAVPATVPVGQHQEH
VVTAAPSAYGQQKPSLGAGASGAGAAAASPHALPPHWVAVTDPSSGQVYF
YNESTRETSWEKPVVAAAPIHVPAAVPAAQASYGGMPPTQQQQSQMQQPA
HHPATLSGTKPLDYYADSFTSSHGNAALMQKYGNVGSMPQQPHIPQQQQQ
QQFGMEQQQPSMVGGIGMNMGMGQPTVFQPNKVPQNPNPTPVAAPTKPPS
PVMPAAPAEPPAEALPTLANLNNLVSALAASSALSAGDKRQLNDVTKGIA
ALSNKLGLGEVGPDVLVRVGQFADCCFNRDFASATAIQSEFTLSIWDTQK
EWIKPLKLLIMLGKKGF*

mRNA from alignment at scaffold_8:631449..636462+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4012 ID=mRNA_4012|Name=jgi.p|Nanoce1779_2|586139|organism=Nannochloropsis oceanica|type=mRNA|length=5014bp|location=Sequence derived from alignment at scaffold_8:631449..636462+ (Nannochloropsis oceanica)
ACAGAACTTGAGCGCGCACGCGTGGTTTGAGGTTAGTTGACTCGGGGGCG
CACAAGCTGTCCTCATCTGTCGGCCCGTCTCCAGACATCATCAGCAAGCA
GTAGCGCAGCACAAAGCAGAGGCTCATCACAAGACAACTGGCATCCAATT
ATGTCGCTGCTGAAGCAAGTCGAAGACAAGAATGCCAATTTGGCATGGTC
GCCCGTGCCGGACCAGGGGAACTTGGTGGCGCTGGGGACGAGGGACGGAG
GCGGGGGAGGCTTTGACGACTACGGGGGCGAGTTGGAGATCCATAAGCTA
GACTTTGGCATAGGCGACACTCGGACGAAAGTTATGGGCACTGTGCGCAC
CAATGGACGATTCACGGCCTTAGCCTGGTCGGCGTTGAATAATAAACGGG
CGGATTTCGCGTTGGGTGTTGTGGCCGGCGGGTTGGCGGATGGCACCGTG
GCCATTTGGGACCCAGCTAAGCTGGTCGCCAACCACCCGCAGCCTCGTAT
CGCGGCCGTCCAGCGGCATACTGGCCCTGTGAATGGTCTACATTTCAATC
CGAGTGCGACATCTTCACACTTGCTGGCCTCGGGTGGGGCGGACAATGAG
GTGTTTGTCTATGCGTTGGATCGGCCGGACACACCCAATGTCTTTATCCC
TGCCCCCGCGCCCAACACCGCCAAGCACACTGCCGAGGTGAGCAAAGTGG
CCTGGAACCCACAGGTTCCTCATATTCTTGCCAGTTGCTCTGGGAACGGT
TCAAGCATTGTGTGGGATTTGCGGCAGAAGAAGCCCTATTGCGAGCTGCG
TGACCCGGCCCGTGGACCCGTGGCGGATATTGCCTGGAATCCTGACGAGG
GCCTGCACATGGTCACGGCCTCAGGGGACGACAACAATCCAGTCATCCGC
CTGTGGGACTTGCGTAGCTCCACCACTCACCCCTTGGCCACGCTCAAGGG
CCATGACCAGGGCCTGCTATCCGTTTCTTGGTGCCCATTCGATTCGAGCT
TCCTCCTCTCTACCGGCCGTGACAATCGCACCCTCTTGTGGGACCTTCAT
CACGCCAGTCCCATCTACGAACTCCCCTCTTCCATCCCTGAGGCAGGCTC
CACGGGCTACGGCGGCTACGGGGCCTCGCAGCAGCGACGATACAACGCCA
CCTGGTCCCCCATCCTCCCCGCTGTAGTAGGCACCTCATCCTTCAACCGC
ACAGTTGAATTCTACTCTCTGACCGGTGTCCGCTCCACCACAGGTCGTGC
CCCCAAGTGGTTGCGACGCCCGGTTGCGGCCAGCTTTGGTTGGGGTGGGC
AGCTCGTGCACGTCGATAATGGCGCTGCTGCCAAGACTGCAAAACCTGCT
GGGGCTCCGGGCGCTCCGAGGGGAGGACCGGGAGGGAAAAAGCCTATGGT
GCATTTGAGGGGGTTGGTGGAGGATACGGAGTTGGTGGCAGCGTCGAAGG
AGTTCAAGGAGATAGTATTGAGTCAGGATTATCCGTCGTTTTGTGCGGCG
AGGGCGAGTGCCGCCAAGACGGGGGAAGAACGGCAGGTATGGGCAGTATT
GCAGACCATTGTAGACAAGGAGAGCAAGAGCCAGTTGAATCACACCCTTG
GATACGATGGGGCGTCTATCGCTGCTGCTGCTGCGGCCGCTACTGCTGCA
TTACGGAGCAAGGCCAAAACACCATCCCCTGCTGGTGCTGCTCCTCCTAT
TGCCTCCACCAGTCACTCTCGCTCCTCGTCAACGGCGAGCGGAGGGCTGG
GAGCGGCGGAGGGATGGGGAGATCTTGGAGATGAGGTGGACGGATTCAGT
GCACCGGCATCTGGGCCGGGTGTCGAGACTGTCACGGGCACGCTCGCGGG
CCTGCGAATGGCGGGAAAGGCGACGCCCTACCCTGAGGCGGAGGCACATG
TTAAGAGGGCATTGTTGGCCGGGGGGTTGGAGGCAGCGGTGCAGGCTTGT
TTGGAGCACGATTTGGTTGCAGAGGCCTTGTTGCTTGCGTCAGCTCCTGA
TGCCGATCCGGGGGTCTGGGCTCGGACGAAGGATGCATATGTAAGTCGAC
ATGCGGGGCAGCGGCCGTTGTTGAGAATTATTGATGCTGTTCTAAAGAGT
GACATGTCGGAGTTAGTCGGGTCGTCGGATTTGATTCAGTGGCAGGAAAC
CCTGGCTTTGCTGAATACGTATACGACGGGGGAAACATTTGCGGGGTTGA
CTGAGCTACTGGGCACGCGCCTGGAGACGGAGAGACGGGATCGAGCGAGT
GCGACATTATGCTACTTGTGCTCGTTGAACATAGGGAAGGCGGTGCGTTT
TTGGGTTGATACGCTGCAAGAGGCCAAGCAGCGGCTGGGGCGTACGGATA
CACTGGCATTGCACCACTTTGTGGAGAAAGTGACCATTTGCCTGTCCGCA
GCGGAGCAGCAGGGGCAGGCCCCCGTCTTGCCTGCGGATGTCGCGGTTCT
CTTTACGGAGTATGCAGAGATCTTGGCAGCACAAGGCGAGCTGGACATGG
CTTACACATTTGTCAAAAATATCCCTGACCCCTCTACCGCTCTGCTTAAG
GACCGTCTCTTCCGCGCTTCTATCACCTTGCAGGCAAACGAGCCGGAGCC
TGCCGGTCCATTTGACATCAAGCACATCGGTATGACGCCCGCCTCGCCGA
CCCGGACCGCTGTCCCGGCCACCGTTCCAGTCGGTCAACACCAAGAGCAC
GTCGTCACTGCAGCTCCTTCCGCATATGGCCAACAGAAACCCTCACTAGG
AGCTGGAGCCTCAGGTGCAGGAGCAGCAGCTGCATCCCCTCATGCTCTCC
CCCCCCACTGGGTGGCTGTCACGGACCCAAGCTCCGGTCAAGTGTATTTC
TACAATGAGTCGACCAGAGAAACAAGCTGGGAGAAGCCCGTGGTTGCAGC
GGCACCGATCCATGTTCCCGCTGCCGTCCCTGCCGCCCAAGCTTCGTACG
GAGGCATGCCCCCCACTCAGCAGCAGCAATCGCAAATGCAGCAGCCCGCG
CACCACCCGGCCACGTTGTCGGGCACCAAGCCCCTTGATTACTACGCGGA
CTCCTTCACTTCCTCCCACGGAAATGCCGCCCTCATGCAGAAATACGGGA
ACGTTGGATCGATGCCGCAGCAACCACACATACCGCAGCAGCAACAGCAA
CAGCAATTTGGGATGGAGCAGCAGCAGCCGTCGATGGTAGGGGGAATTGG
GATGAACATGGGCATGGGTCAACCCACTGTCTTCCAACCCAACAAGGTGC
CTCAAAATCCCAATCCCACGCCCGTCGCCGCCCCCACCAAGCCCCCTTCT
CCCGTAATGCCCGCTGCTCCTGCCGAGCCTCCCGCCGAGGCGTTGCCCAC
TTTGGCGAATCTAAACAATTTGGTGTCCGCGCTTGCGGCCTCGTCTGCTT
TGTCCGCCGGGGATAAGCGCCAATTGAACGACGTGACGAAGGGCATTGCT
GCTCTCTCTAATAAGTTGGGATTGGGAGAGGTGGGCCCTGACGTGCTGGT
CCGTGTCGGACAATTCGCGGATTGTTGTTTCAATCGGGATTTTGCCTCAG
CTACGGCGATTCAGTCTGAGTTTACGCTCAGCATTTGGGACACGCAGAAG
GAGTGGATAAAGCCGTTGAAGCTCCTCATCATGCTCGGCAAGAAGGGATT
TTAGGCTGGCGGGCATGAAAGAGGAGATGGCGGAGAGGTAGATAGCAGTA
TGTCTGCCTTGTGTCGTGCGTGCTCGTACGAGTCCGCGTTGAATGGAGAG
GGAGGCGGAGTATAGCAGGATAGAGGTTCTAATTTGAGTGGATGAGGAAG
TCATAAAAGTGAAGGCGTTTCGCCTTCGCATAAGAAACAACTCAAAATCT
GCCTGCAAAGTCAAGGAAACAAACATACAAAAAGATAAGAAACAAAAACA
AATGTTGGGAGTAGGGTGTGCGCGCGTGCGGGAGGGGAGGTTATCTTCAT
GGGCCAACGCCGTCCTCTGGCTTCTACGGCACAACCCAAGCCGAGCAGCG
CTAGTCAAATACCCACACCATCCTCGCCCCCTACGTTATCATGCCACTCT
GCAGGAAGAGTACACGCAAGCTTGGTCTTGGCAGGAAAAGCCCCCCCCCT
GGACGCTCAGTCAAGCAAGCCAGGAGTGATCATGGCTACGAGGACCCCGC
AGCAAGAAGACGACGAGACGACGGCCGTATCGGAGGTGGACGTGGAGAGC
GAATTAAGCCAGCACACCCTGGCCATGTTGAAGGAGCACTTGGCCGAGAA
AGAGCACGAGGGCCCTGCTCACCTCTTAGGCAAAGAGAATTACGGCCTTG
CCCAATTCTGGTATTCAGAGGAGACTGCGAAGGCGCTCTTGATGGAAGCC
CTATCCCACGTAACGGATGGTGGTGTAGTGGCCGTATTAAGTGCCCCCTC
TCTAATGGTGCCGGCACAGGAGTTAGAGGGCGGCAAGCATTTTTCTAAGC
TGCAGCTTTTTGAGATTGATGAACGTTTCGGAGTCCAATTTCCCGACAAT
TTCTATCACTACGATTATAATGCAGCGACCGTCCTCCCCACCAAAATGTT
GAGGCAAGTGACGGCCTTTGTGATCGACCCTCCACGCCTGAATATTGATA
CGTTGAAAGAGTATTTTATTTCAACACGTCTTCTCGCCAAACCGTGCACG
GACGGCAGTGTGCCGCCATGCATTGTGGTGACGGCTGCTGTACTCGAGGA
CGCTGTGAGGGAGGAGTTCGGGCTGCGACCAGTACTAAAATTTGAGATAA
TCCACACTAGCAAGCTAGGAAATCCGCTGCAGGCGTATACAAACTACCCG
CCCAAGGTCTTAGACGCCTCTTCTTGGCAGGAGACTGTATGAGTGAAGGA
GAGAAAAAGAAGTGAAGACGCAGCTCACAAGTCATGCGTGTCTTTTGCTA
TTTTGGCTTGTGGACTTCAATAATATGTTGTACCTGCGCCAGGCGGAAGT
TTTTCGATTTCAACTTTTGTAAAATAAAATATTGAATGAGAAGGAGCGAA
AGGAAAAAAGCATG

Coding sequence (CDS) from alignment at scaffold_8:631449..636462+

>mRNA_4012 ID=mRNA_4012|Name=jgi.p|Nanoce1779_2|586139|organism=Nannochloropsis oceanica|type=CDS|length=3504bp|location=Sequence derived from alignment at scaffold_8:631449..636462+ (Nannochloropsis oceanica)
ATGTCGCTGCTGAAGCAAGTCGAAGACAAGAATGCCAATTTGGCATGGTC
GCCCGTGCCGGACCAGGGGAACTTGGTGGCGCTGGGGACGAGGGACGGAG
GCGGGGGAGGCTTTGACGACTACGGGGGCGAGTTGGAGATCCATAAGCTA
GACTTTGGCATAGGCGACACTCGGACGAAAGTTATGGGCACTGTGCGCAC
CAATGGACGATTCACGGCCTTAGCCTGGTCGGCGTTGAATAATAAACGGG
CGGATTTCGCGTTGGGTGTTGTGGCCGGCGGGTTGGCGGATGGCACCGTG
GCCATTTGGGACCCAGCTAAGCTGGTCGCCAACCACCCGCAGCCTCGTAT
CGCGGCCGTCCAGCGGCATACTGGCCCTGTGAATGGTCTACATTTCAATC
CGAGTGCGACATCTTCACACTTGCTGGCCTCGGGTGGGGCGGACAATGAG
GTGTTTGTCTATGCGTTGGATCGGCCGGACACACCCAATGTCTTTATCCC
TGCCCCCGCGCCCAACACCGCCAAGCACACTGCCGAGGTGAGCAAAGTGG
CCTGGAACCCACAGGTTCCTCATATTCTTGCCAGTTGCTCTGGGAACGGT
TCAAGCATTGTGTGGGATTTGCGGCAGAAGAAGCCCTATTGCGAGCTGCG
TGACCCGGCCCGTGGACCCGTGGCGGATATTGCCTGGAATCCTGACGAGG
GCCTGCACATGGTCACGGCCTCAGGGGACGACAACAATCCAGTCATCCGC
CTGTGGGACTTGCGTAGCTCCACCACTCACCCCTTGGCCACGCTCAAGGG
CCATGACCAGGGCCTGCTATCCGTTTCTTGGTGCCCATTCGATTCGAGCT
TCCTCCTCTCTACCGGCCGTGACAATCGCACCCTCTTGTGGGACCTTCAT
CACGCCAGTCCCATCTACGAACTCCCCTCTTCCATCCCTGAGGCAGGCTC
CACGGGCTACGGCGGCTACGGGGCCTCGCAGCAGCGACGATACAACGCCA
CCTGGTCCCCCATCCTCCCCGCTGTAGTAGGCACCTCATCCTTCAACCGC
ACAGTTGAATTCTACTCTCTGACCGGTGTCCGCTCCACCACAGGTCGTGC
CCCCAAGTGGTTGCGACGCCCGGTTGCGGCCAGCTTTGGTTGGGGTGGGC
AGCTCGTGCACGTCGATAATGGCGCTGCTGCCAAGACTGCAAAACCTGCT
GGGGCTCCGGGCGCTCCGAGGGGAGGACCGGGAGGGAAAAAGCCTATGGT
GCATTTGAGGGGGTTGGTGGAGGATACGGAGTTGGTGGCAGCGTCGAAGG
AGTTCAAGGAGATAGTATTGAGTCAGGATTATCCGTCGTTTTGTGCGGCG
AGGGCGAGTGCCGCCAAGACGGGGGAAGAACGGCAGGTATGGGCAGTATT
GCAGACCATTGTAGACAAGGAGAGCAAGAGCCAGTTGAATCACACCCTTG
GATACGATGGGGCGTCTATCGCTGCTGCTGCTGCGGCCGCTACTGCTGCA
TTACGGAGCAAGGCCAAAACACCATCCCCTGCTGGTGCTGCTCCTCCTAT
TGCCTCCACCAGTCACTCTCGCTCCTCGTCAACGGCGAGCGGAGGGCTGG
GAGCGGCGGAGGGATGGGGAGATCTTGGAGATGAGGTGGACGGATTCAGT
GCACCGGCATCTGGGCCGGGTGTCGAGACTGTCACGGGCACGCTCGCGGG
CCTGCGAATGGCGGGAAAGGCGACGCCCTACCCTGAGGCGGAGGCACATG
TTAAGAGGGCATTGTTGGCCGGGGGGTTGGAGGCAGCGGTGCAGGCTTGT
TTGGAGCACGATTTGGTTGCAGAGGCCTTGTTGCTTGCGTCAGCTCCTGA
TGCCGATCCGGGGGTCTGGGCTCGGACGAAGGATGCATATGTAAGTCGAC
ATGCGGGGCAGCGGCCGTTGTTGAGAATTATTGATGCTGTTCTAAAGAGT
GACATGTCGGAGTTAGTCGGGTCGTCGGATTTGATTCAGTGGCAGGAAAC
CCTGGCTTTGCTGAATACGTATACGACGGGGGAAACATTTGCGGGGTTGA
CTGAGCTACTGGGCACGCGCCTGGAGACGGAGAGACGGGATCGAGCGAGT
GCGACATTATGCTACTTGTGCTCGTTGAACATAGGGAAGGCGGTGCGTTT
TTGGGTTGATACGCTGCAAGAGGCCAAGCAGCGGCTGGGGCGTACGGATA
CACTGGCATTGCACCACTTTGTGGAGAAAGTGACCATTTGCCTGTCCGCA
GCGGAGCAGCAGGGGCAGGCCCCCGTCTTGCCTGCGGATGTCGCGGTTCT
CTTTACGGAGTATGCAGAGATCTTGGCAGCACAAGGCGAGCTGGACATGG
CTTACACATTTGTCAAAAATATCCCTGACCCCTCTACCGCTCTGCTTAAG
GACCGTCTCTTCCGCGCTTCTATCACCTTGCAGGCAAACGAGCCGGAGCC
TGCCGGTCCATTTGACATCAAGCACATCGGTATGACGCCCGCCTCGCCGA
CCCGGACCGCTGTCCCGGCCACCGTTCCAGTCGGTCAACACCAAGAGCAC
GTCGTCACTGCAGCTCCTTCCGCATATGGCCAACAGAAACCCTCACTAGG
AGCTGGAGCCTCAGGTGCAGGAGCAGCAGCTGCATCCCCTCATGCTCTCC
CCCCCCACTGGGTGGCTGTCACGGACCCAAGCTCCGGTCAAGTGTATTTC
TACAATGAGTCGACCAGAGAAACAAGCTGGGAGAAGCCCGTGGTTGCAGC
GGCACCGATCCATGTTCCCGCTGCCGTCCCTGCCGCCCAAGCTTCGTACG
GAGGCATGCCCCCCACTCAGCAGCAGCAATCGCAAATGCAGCAGCCCGCG
CACCACCCGGCCACGTTGTCGGGCACCAAGCCCCTTGATTACTACGCGGA
CTCCTTCACTTCCTCCCACGGAAATGCCGCCCTCATGCAGAAATACGGGA
ACGTTGGATCGATGCCGCAGCAACCACACATACCGCAGCAGCAACAGCAA
CAGCAATTTGGGATGGAGCAGCAGCAGCCGTCGATGGTAGGGGGAATTGG
GATGAACATGGGCATGGGTCAACCCACTGTCTTCCAACCCAACAAGGTGC
CTCAAAATCCCAATCCCACGCCCGTCGCCGCCCCCACCAAGCCCCCTTCT
CCCGTAATGCCCGCTGCTCCTGCCGAGCCTCCCGCCGAGGCGTTGCCCAC
TTTGGCGAATCTAAACAATTTGGTGTCCGCGCTTGCGGCCTCGTCTGCTT
TGTCCGCCGGGGATAAGCGCCAATTGAACGACGTGACGAAGGGCATTGCT
GCTCTCTCTAATAAGTTGGGATTGGGAGAGGTGGGCCCTGACGTGCTGGT
CCGTGTCGGACAATTCGCGGATTGTTGTTTCAATCGGGATTTTGCCTCAG
CTACGGCGATTCAGTCTGAGTTTACGCTCAGCATTTGGGACACGCAGAAG
GAGTGGATAAAGCCGTTGAAGCTCCTCATCATGCTCGGCAAGAAGGGATT
TTAG

Synonyms

Publications