jgi.p|Nanoce1779_2|595742, mRNA_7141 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|595742
Unique NamemRNA_7141
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length1048
Alignment locationscaffold_16:383321..384368 -

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Properties
Property NameValue
TranscriptId595828
TrackFilteredModels2
ProteinId595742
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:383321..384368 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595742gene_7141Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595742mRNA_7141-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_7141CDS_7141Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_7141 ID=mRNA_7141|Name=jgi.p|Nanoce1779_2|595742|organism=Nannochloropsis oceanica|type=mRNA|length=1048bp
GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTGTTGT
TGTTGTTTTTGAATTTGTAGGTGTTGCTGCTGCTCCTGCTGCTGTTGAAA
AAGCCAAAGCTGTTGCTGTTCTCGTTTCCGAGCTACACCGGCCGCCGCCT
GTCTCTCTTTTTCTTGCTCCCTCCGCTCCGCCGCTTCCTCCTTATCGAGC
CGCCTCTGGTGCAAGTCCGCTGAAGGAGGCACTCCCTGGGATAGCGCATA
AGCTACAGCAGTAGGGATGGCATTGCTTCCTCCCTCCTTGATCTTCTTCC
TTCGATTCCCTTCCTCCTCCATCTCTTCCGCCTCCTCCTCTTCTTCTCCA
GCAATCCAATCAAGCTGCAGTCCCAGTCCTTGTTTTGGACAAAGGCTAAA
TCTCGCCACCACCAACTTCTTATCAACAGCACCACAACGGAGGGCAGCAG
GAGCGGTATCATTATCGGCAGCCATGCCCTTTCCCCACAATCTCATCTCC
GCCAAACACGGCGTAGTCAGCCTCCGCACCAGCCGCATGGCACTCAGTCC
TCCCGACACATACAACCCTCCCAATATCTGCTTCAACTCCCACACTGGCC
CCACCAACAGCTTCCCATTCACGCCTACCAGAATATCACCATCCCTCACA
ACAGCCGCGAGGCTCTTCGGTACGTTTCGAAACCGCAGACACTTACTCCT
CCGCCCTTTGAGGGAAGACATGCTACTAGTCTGAATAGGGGCTGCCTCAA
GGGTGAGTGGCTCATAAAAACCGAGCTCACCTTCGGTCTCGATTTGGTAG
GCAAAGCCTAGGTCGCCGCTGTACTGGTCCAGAATGCTTGCGCTCCATTC
GAGGGACTGAGCGTGGGAATCCAGGAAGATGTTGGTGGTGCCAAAGAGAG
ACGAAGGGTACTGTTGCTGCTGCTGCGATGGAAAGGATGACTGGGGAAAA
AGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGAGAATAGAT
CTCTTGATGGAGGTACTGTGGGTAATGCTGCTGCTGCTGCTGCTGCTG
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protein sequence of jgi.p|Nanoce1779_2|595742

>mRNA_7141-protein ID=mRNA_7141-protein|Name=jgi.p|Nanoce1779_2|595742|organism=Nannochloropsis oceanica|type=polypeptide|length=156bp
MALLPPSLIFFLRFPSSSISSASSSSSPAIQSSCSPSPCFGQRLNLATTN
FLSTAPQRRAAGAVSLSAAMPFPHNLISAKHGVVSLRTSRMALSPPDTYN
PPNICFNSHTGPTNSFPFTPTRISPSLTTAARLFGTFRNRRHLLLRPLRE
DMLLV*
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mRNA from alignment at scaffold_16:383321..384368-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7141 ID=mRNA_7141|Name=jgi.p|Nanoce1779_2|595742|organism=Nannochloropsis oceanica|type=mRNA|length=1048bp|location=Sequence derived from alignment at scaffold_16:383321..384368- (Nannochloropsis oceanica)
GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTGTTGT
TGTTGTTTTTGAATTTGTAGGTGTTGCTGCTGCTCCTGCTGCTGTTGAAA
AAGCCAAAGCTGTTGCTGTTCTCGTTTCCGAGCTACACCGGCCGCCGCCT
GTCTCTCTTTTTCTTGCTCCCTCCGCTCCGCCGCTTCCTCCTTATCGAGC
CGCCTCTGGTGCAAGTCCGCTGAAGGAGGCACTCCCTGGGATAGCGCATA
AGCTACAGCAGTAGGGATGGCATTGCTTCCTCCCTCCTTGATCTTCTTCC
TTCGATTCCCTTCCTCCTCCATCTCTTCCGCCTCCTCCTCTTCTTCTCCA
GCAATCCAATCAAGCTGCAGTCCCAGTCCTTGTTTTGGACAAAGGCTAAA
TCTCGCCACCACCAACTTCTTATCAACAGCACCACAACGGAGGGCAGCAG
GAGCGGTATCATTATCGGCAGCCATGCCCTTTCCCCACAATCTCATCTCC
GCCAAACACGGCGTAGTCAGCCTCCGCACCAGCCGCATGGCACTCAGTCC
TCCCGACACATACAACCCTCCCAATATCTGCTTCAACTCCCACACTGGCC
CCACCAACAGCTTCCCATTCACGCCTACCAGAATATCACCATCCCTCACA
ACAGCCGCGAGGCTCTTCGGTACGTTTCGAAACCGCAGACACTTACTCCT
CCGCCCTTTGAGGGAAGACATGCTACTAGTCTGAATAGGGGCTGCCTCAA
GGGTGAGTGGCTCATAAAAACCGAGCTCACCTTCGGTCTCGATTTGGTAG
GCAAAGCCTAGGTCGCCGCTGTACTGGTCCAGAATGCTTGCGCTCCATTC
GAGGGACTGAGCGTGGGAATCCAGGAAGATGTTGGTGGTGCCAAAGAGAG
ACGAAGGGTACTGTTGCTGCTGCTGCGATGGAAAGGATGACTGGGGAAAA
AGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGAGAATAGAT
CTCTTGATGGAGGTACTGTGGGTAATGCTGCTGCTGCTGCTGCTGCTG
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Coding sequence (CDS) from alignment at scaffold_16:383321..384368-

>mRNA_7141 ID=mRNA_7141|Name=jgi.p|Nanoce1779_2|595742|organism=Nannochloropsis oceanica|type=CDS|length=468bp|location=Sequence derived from alignment at scaffold_16:383321..384368- (Nannochloropsis oceanica)
ATGGCATTGCTTCCTCCCTCCTTGATCTTCTTCCTTCGATTCCCTTCCTC
CTCCATCTCTTCCGCCTCCTCCTCTTCTTCTCCAGCAATCCAATCAAGCT
GCAGTCCCAGTCCTTGTTTTGGACAAAGGCTAAATCTCGCCACCACCAAC
TTCTTATCAACAGCACCACAACGGAGGGCAGCAGGAGCGGTATCATTATC
GGCAGCCATGCCCTTTCCCCACAATCTCATCTCCGCCAAACACGGCGTAG
TCAGCCTCCGCACCAGCCGCATGGCACTCAGTCCTCCCGACACATACAAC
CCTCCCAATATCTGCTTCAACTCCCACACTGGCCCCACCAACAGCTTCCC
ATTCACGCCTACCAGAATATCACCATCCCTCACAACAGCCGCGAGGCTCT
TCGGTACGTTTCGAAACCGCAGACACTTACTCCTCCGCCCTTTGAGGGAA
GACATGCTACTAGTCTGA
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Synonyms
Publications