jgi.p|Nanoce1779_2|531872, gene_7841 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|531872
Unique Namegene_7841
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_21:477585..480559 -

Link to JBrowse

Properties
Property NameValue
TranscriptId531958
ProteinId531872
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:477585..480559 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008553proton-exporting ATPase activity, phosphorylative mechanism
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0015662ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0006810transport
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL035ncniL035Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G00440NO17G00440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|531872mRNA_7841-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|531872mRNA_7841Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|531872

>mRNA_7841-protein ID=mRNA_7841-protein|Name=jgi.p|Nanoce1779_2|531872|organism=Nannochloropsis oceanica|type=polypeptide|length=875bp
MGERDDIPPKLTLQKTKTVSKLHSEGLTSEFAAELLKKFGKNELPEKKKA
KWVIYVEQLIAPMPCMIWAAIVIEIAIKSWPDMAILLAIQFMNASLSYYE
TTKAGDAVAALKASLKPVAHVKRDGKFVTLDASYLVPGDLVLLGAGGAVP
ADCIVNHGNIDVDQAALTGESLPVTFYKGDSVKMGSTVVRGEVEGTVECT
GANTFFGRTAALLQGGDESSNLDKLLMRIMIVLVFLSMSLCGIAFGYLLS
SGEDVRNALSFTVVLLVASIPIAIEIVCTTTLALGSRELAKDGAIVSRLA
AIEDMAGMSILCSDKTGTLTMNKMMIQQETPIYLKGETQYTVLRYAAMAS
KWNEPPRDALDTLVHGCADLASLRDVKQTDYMPFDPTIKRTEATVVLPRG
EMFKVTKGAPHIILQLLDQKDFGKVVAQCEKDVEALGERGIRSLAVAKTN
SAGKWEMAGLLTFLDPPRPDTKATIDQARDFGVEVKMITGDHLLIAKETA
RQLGMGQDIRDATMLPKLDPETKKPPADLMDHFEYVEATSGFAQVFPEHK
FLIVEVLRRGGYKTGMTGDGVNDAPALKRADVGVAVQGSTDAARAAADIV
LTKPGLSTIVTAIVVARIVFGRMTSFITYRIAATLQLLVFFFIAVLTLHP
IEFQPEGTDENWPAFFHMPVLMLMLITLLNDGTLISIGYDNVSPNTTPDK
WNLKVLFTVSAALGGVACLSSLFLLWVALDSWNPSGLWGSCGLAGLTYGQ
VTSMVYLKVSISDFLTLFSARSGDDFFWTNKPSKILLVAATIACSLSTLM
ANIWPESLPDGIPTIGLARLPPHLLSLYVWLYCFLCWFIQDAAKVATYKV
LRTYNVFHVNDIVSLKKSDISIMV*
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Synonyms
Publications