jgi.p|Nanoce1779_2|673612, gene_8677 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|673612
Unique Namegene_8677
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_27:142325..148872 +

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Properties
Property NameValue
TranscriptId673698
ProteinId673612
Product nameGlycosyltransferase family 20-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_27supercontigscaffold_27:142325..148872 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003825alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
GO:0008444CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
GO:0003824catalytic activity
GO:0016780phosphotransferase activity, for other substituted phosphate groups
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0005992trehalose biosynthetic process
GO:0008654phospholipid biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL044ncniL044Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO27G00890NO27G00890Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673612mRNA_8677-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673612mRNA_8677Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|673612

>mRNA_8677-protein ID=mRNA_8677-protein|Name=jgi.p|Nanoce1779_2|673612|organism=Nannochloropsis oceanica|type=polypeptide|length=1540bp
MRVTTKNDIYTHKKKKKRLITLSSEFMVDVHCLSALRSSRRSARLLGLVA
SASSASSASSAFALPVGKVHPIVLPRSNSLRNKKIVPFHFSKLARVMGGG
KNAPSNAGRNGGSNEPSLWNLPNILTLMRVFSIPVLVGIFYMNTSWRNAA
CSGLFIFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMAD
RLDSPIVTVSTAIIICREIGVSALREWMASQGARDTVAVGYWGKIKTATQ
MIALSVLLFVQPPLALHDAFAHKLLEVGIGLLAFSAFLTVTSAVGYVKAA
WPALTGKGKKAAGQQQQQQEQRQQHNTITQQQQRSITTSSSSSSITSIPK
PRTMSSSSTAAEDVMKEAAALQEEVALPPELAVEPDLEVAGSDATAAAGG
APRGAVGAAGSFLSGASPRSMGAEELLKAIAAEEAMALKRGKTPTEAMSL
QEQAILANIQELQRQLWKVKSEQEKKDMGDEPGGGEDQAEGQPKHRVIIV
ANRLPVSGGRDEKTGEWDFKMSSGGLVTALKGSREELNALWIGWLGQEIP
EEDRPQVREKLLREYNAVPVFLSDEMVNKYYNGFSNDVLWPLFHYMPLPI
YQTEVGSDKRFDTGLWSAYREANVLFADAVAEILLETDFVWVHDYHLMWL
PLELRQRFKHANIGWFLHTPFPSSEIYRILPVRKQLLEALLAADLLGFHT
YDYARHFLSACGRVLEVDTTPRGLEYASHFTSLGVFPIGIDPEHITNILK
RPTVHARIAELTETFGGRKVLLGVDRLDYIKGMPHKLLALELFLTRHPEW
RGKVTLIQVGVPSRTEVPEYQRLSERVNELVGRINGTFGNLEYAPVHYIN
QSITQEELVAIYNIADVCLVTSLRDGMNLVSYEFVAAQQEMPGIHQKDGP
GVLVLSEFAGSAQSLSGAIRINPWNTEEVCHAIQQALTLSRAEREIRQLK
LSRYVSVNTASSWAKSFVTELRTMCANKPNLSKLPRLPFDVARAAYERAK
NRLIVADYDGTLTQLQSVPQLATPSPYITNLLDSLSKDPKNTVVIVSGRE
KRFMDTWLGKLKMALAAEYGFYYRMPDEEAWQTMAPEVDTSWREIVRPIL
EYFTERTPGTYIEKKESSLTWHYRDADPNFGSWQAKDMQIQLEDVLSNLP
LEIIQGNRMVEVRHQGASKGMVVETVLRHMADPLRGGKKVADGPVDFIFC
VGDDRTDEDMFQVLKIFRAEAARLAALSSFPNSVGGYHPGGVGYGLGGGM
TPLSSLAGGGEGMIYVEGMARAGAGEGGGQPEARPPSFPTASMPTPSTAN
DSNSSSSISSSSRISAFEHVGGTVNGLAGGAAASFANTPSRGGGGGGGLS
QKQPTVLPKSTVVPLPTSEQQQQDAHVVGEASVHMDEGRARGSEGGRDVP
GSPITIKDRLQHLMVADDSDLTTAGAVTTAAATTLMLPDDPPFPCTPLGG
MGGREMPLMTRDAKVFTVHVGNTYSQAEYHVENLLDVRRLLRDFASISFR
QMTRSDSSSSSSDSSSSSSDSSHSSSRTTAPLIGEPQDA*
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Synonyms
Publications