jgi.p|Nanoce1779_2|673860, gene_9621 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|673860
Unique Name	gene_9621
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Alignment location	scaffold_31:96213..104375 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	673946
ProteinId	673860
Product name	expressed protein
Portal id	Nanoce1779_2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_31	supercontig	scaffold_31:96213..104375 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE164714	2022-03-15
GO annotation for N. oceanica CCMP1779 v2	2020-03-30
PRJNA285666	2019-07-03
PRJNA157867	2019-07-02
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003976	UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0030154	cell differentiation

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ncniL049	ncniL049	Nannochloropsis oceanica (N. oceanica CCMP1779)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO06G04470	NO06G04470	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|673860	mRNA_9621-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|673860	mRNA_9621	Nannochloropsis oceanica (N. oceanica CCMP1779)	mRNA

Sequences

The following sequences are available for this feature:

protein sequence

protein sequence of jgi.p|Nanoce1779_2|673860

>mRNA_9621-protein ID=mRNA_9621-protein|Name=jgi.p|Nanoce1779_2|673860|organism=Nannochloropsis oceanica|type=polypeptide|length=1471bp
MEVLQGLWQRLDEKQSSFEQALHSQVKKAQRHTYTIFLRRPCLCLFFLLL
LLVPFLNGLLLVAFGGCYHRNLLSFLARGEGPRSSWRRECTTRRFADNIA
HKTFESVLSYDSIDVVYTWVNGSDPRWLAKKAKYQAAEAAAAAAGEGKRR
GNLRSGVKGEGVPASTSSGSDGDEIPVMTDTESFSSFPSSSFSPWDEEQE
EKPRNDHVAENRYRDSNELRFSLRSLDRFAPWVRKVYLVTDNQIPKWLAL
DNPRLEIIPHTAIFPNKSHLPVFSSPAIEAHLHRIPGLSQKFIYFNDDVF
LAAPTYPEDFVSTSGVQKVYLSWAVPDCAPGCQTSWIGDGYCDMACNVTA
CGFDYPDCVNASSYGRPGSSPSSSPSSSSYSHTSSSGTGKPPCSLGCPAN
WVGDKICDAKCNNVACAFDGVDGGTEGRREEEAVREVEYLSATHDNEALV
QNAVLLKKHNLLLLLFPHDKENHVMMDTSTGNVTFTITGKLKKKQTDSRD
AYIPFSSTPSPSAFTSDKREEEEEEEEEEEIQVSFRLELRPVVLAVKRPI
LPVVVADGRVRVSALRGYAVLTGGGAVDEEEGEGEGEGEDSVGTIKVALH
PFPLLSSVLQDTSIATTTTTITSTVESQPSRPPSLPTRLAEGIILTFSSP
SASPSSSPSSASSASLSLSPHEEAMAKVLVSLYDRTGETLTEETYPLSSL
PPSLPPSLLEEEVARPLFWSRNEEGEGREGGKEEGRVTLLVPFAQEMEGK
REWTHGRATLLLPSSSPLVRLSSATKPRGRKKDKDKASAKAGGKRSDGSS
TSRSSTLHPSLLSAEFFVYWGNSTQVLAEGEGVMEGGGREEEKEEKEEGE
MRPFDLVGSSSRYRRRLLSVSSSSSSSSSFSSSHSYLPQHAIQLLGDEDE
DRREEGTEGWMRRALALQGPREDEGEDEARRADFLYWHRVLMATIKEEGE
GGERREGLREGGREGGRVGVHRRLLDTFGQSLSHVNRLYHKAFGPDARKV
PAHMPHMIDKGLVEEMQARWKQEWDATSSHRFRSPKDMQYSFSFYYYLMN
LHKAHPLDMKAFWHSHLDLNRDGYLDDNELITLAALGMGGDPTYEYLMEI
KGCMLEGGRDGGKERGGSGWRRRLGEMMGIEVGTEGAPWHAAIKEEGEEG
DGEEGGQGEEAGSSGDSNPVSVTPIPSSSSSSSSTSSSSSSSIATAMDSK
EREDKEEEENGKYRRVSQEGDPRVTLESFLSCPKVQNDLQEHVRRKGPWI
PGQVEEVTFQMLSDDIDQTRKQLNTIRAKRTKFVCLNDDVKSSYSSHDTF
GLLQNFFLSLFPDRCQFELPLHLENRFLYLDEYHSASRKLFWVQVGLALS
FLLLLLMTIHDCLYPSSFSPRSSLDGPQEEEGEDECKGGGQGGKGREGAH
MQVSPTKDEEDQQRKEERERVREREERVSRLTSASPLLAASSLLEGATSG
RGGGGEGAHTRAWEGGHKRD*

Synonyms

Publications