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Properties
Property Name | Value |
TranscriptId | 674480 |
Track | FilteredModels2 |
ProteinId | 674394 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_42 | supercontig | scaffold_42:140166..142321 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10041 ID=mRNA_10041|Name=jgi.p|Nanoce1779_2|674394|organism=Nannochloropsis oceanica|type=mRNA|length=1245bp ACAGACTGGCCACAACCGTTGCTCTACAACCTCTCTACCCTCTCTGCGTC AACACCGGTGCCATGTACCCGGCTACCACCACCTCTCTCCGAGCGCTCCG TGGGGCCCGCCGCCTCGTCCATTTGCGTCCCTTGGCCTTGATCTCTACCA CTTTCATAAACACCCACCGGCCTGTCTATCTCCGCCAGTCAGGAGCTTTG ACGGCGGCGGCCCCTTCCTCCTTCTCGACCTCCTCCACCTCTGCGGCTAA CCCCCCTGCTAACTCTGGGCGTACTGATGATGAGCCGCAGGTCCGCGCGA CTGCCCGTCCCACCTCTTTGACGCAACGTATCCTCCATATATTCGGCATG GGCGAGTCGTTGAAGCGCACAAAGAACTCAGAAGCTCTCCTGCAAGCGTG CATCAGCCAGGCAAGCAACACAACTTTTTATCGAGCCGGTCGCATCTCTG ACTCTTTCCGGGCGGCTCACGGGCTGTTGGTAGTCCACGTGTGGATGCTG CACAAGCGCTTACTGCGAGAAGGGGAAGAAGGGAAGGTCTTGGAAGAGGC GCTCTTCGACCGGTTGTGGGACGAGACCACCGCCCGCATTCGTGCTCTGA AGGTCAACGAACTCTCCGTAAATAGCTATGTAAAAGAGGTGCAATCTTAT TCATTCGGTGCCTGTGTGTCCTACGACGCTGCTCAAGCCCTCGAGACGGA GGAAGATAGGGTGGACGAACTGGCTGGCGCACTTTACAGATATGTCTACC TCCGTGACGAGCACCTGAACGAAGATCACGTACTGGAGCTAGCAAGGTAT GTGCAGCGCGAGCTTGACTCCCTCATGATGCTGCCGAAAGAAGCGATATT TGAATCGCGGTTTAAATGGGGTCCTCTCCCATCATGGGGAGGGAGGGCGG GAGGGAGGGGTGGAGGAAGGGTAGCGCCCCGGTACGTGAGATCAGACGGG AAGGCAGTACCGGACGAGGAGGAGGAGGAGGAGGAAGGGGAGGAGGAGGT GGAGAAGGAGGAAGGCAAGACACAGGCGGAGGAGGAGGAGGACAAGAGGG GGGAATGGCGGACGGCCTTCTCGGAACAGGGTCGAATGTATTATTGGAAT GTCCGAACGCGGGAATCGACGTACGAGAAGCCCTACTAGCTTCCTTGCCT GCCCAACCTCCTTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCGTATGTGA AGATTGTTAGAAACAGGGAGGGGACTTAATGAGGCTCTTTCCCTC back to topprotein sequence of jgi.p|Nanoce1779_2|674394 >mRNA_10041-protein ID=mRNA_10041-protein|Name=jgi.p|Nanoce1779_2|674394|organism=Nannochloropsis oceanica|type=polypeptide|length=359bp MYPATTTSLRALRGARRLVHLRPLALISTTFINTHRPVYLRQSGALTAAA PSSFSTSSTSAANPPANSGRTDDEPQVRATARPTSLTQRILHIFGMGESL KRTKNSEALLQACISQASNTTFYRAGRISDSFRAAHGLLVVHVWMLHKRL LREGEEGKVLEEALFDRLWDETTARIRALKVNELSVNSYVKEVQSYSFGA CVSYDAAQALETEEDRVDELAGALYRYVYLRDEHLNEDHVLELARYVQRE LDSLMMLPKEAIFESRFKWGPLPSWGGRAGGRGGGRVAPRYVRSDGKAVP DEEEEEEEGEEEVEKEEGKTQAEEEEDKRGEWRTAFSEQGRMYYWNVRTR ESTYEKPY* back to topmRNA from alignment at scaffold_42:140166..142321- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10041 ID=mRNA_10041|Name=jgi.p|Nanoce1779_2|674394|organism=Nannochloropsis oceanica|type=mRNA|length=2156bp|location=Sequence derived from alignment at scaffold_42:140166..142321- (Nannochloropsis oceanica) ACAGACTGGCCACAACCGTTGCTCTACAACCTCTCTACCCTCTCTGCGTC
AACACCGGTGCCATGTACCCGGCTACCACCACCTCTCTCCGAGCGCTCCG
TGGGGCCCGCCGCCTCGTCCATTTGCGTCCCTTGGCCTTGATCTCTACCA
CTTTCATAAACACCCACCGGCCTGTCTATCTCCGCCAGTCAGGAGCTTTG
ACGGCGGCGGCCCCTTCCTCCTTCTCGACCTCCTCCACCTCTGCGGCTAA
CCCCCCTGCTAACTCTGGGCGTACTGATGATGAGCCGCAGGTATGCATCC
ATGGGCTTTCATGTCTAGAAACTTCTCTTTTCGTTAGGCATCGTGCTTAC
CGTTTGAGCCCTCTCGCCCTCCCTACTCCCTGTCTTAGGTCCGCGCGACT
GCCCGTCCCACCTCTTTGACGCAACGTATCCTCCATATATTCGGCATGGG
CGAGTCGTTGAAGCGCACAAAGAACTCAGAAGCTCTCCTGCAAGCGTGCA
TCAGCCAGGCAAGCAACACAACTTTTTATCGAGGTAGGTGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAAGAAGAGGGAGGAAGGCAGTGGTTGAATG
ATTGCTTGCGGCGGCCTTAACAATCTTTTAATCTTCTGGTAAAAAACGGC
GAATCATTCGGGGGAAGAAGTAAATTGTCGACGGATGCGAGTGCTGTATT
GGATCGTATCATGGATTCCTTATCCTGCTTTCATCATTCCTTCCCTCCCT
CCCTCCCTCAGCCGGTCGCATCTCTGACTCTTTCCGGGCGGCTCACGGGC
TGTTGGTAGTCCACGTGTGGATGCTGCACAAGCGCTTACTGCGAGAAGGG
GAAGAAGGGAAGGTCTTGGAAGAGGCGCTCTTCGACCGGTTGTGGTACGT
TTCCTCCCTCCTTCCCTCCTCCCTCCCTTCCTTCCTCCCTCCCTCTCTCC
CTCCTCGCACACCCGAGCATTTGATACAATGGGGAAAATGGATAAGGCAC
GGGCGCACAACTTTTTGGTCCATGGTGATATGTCTTCGTCCTTCCTCCCC
TCTTTCCTCCTTCCCTTCTCCCCTCCTTCCCTCCCTCGTCAGTTCAACTG
TTGACTGTCCCCCCCTCCCTCCCTCCCTCCCTCAGGGACGAGACCACCGC
CCGCATTCGTGCTCTGAAGGTCAACGAACTCTCCGTAAATAGCTATGTAA
AAGAGGTGCAATCTTATTCATTCGGTGCCTGTGTGTCCTACGACGCTGCT
CAAGCCCTCGAGACGGAGGAAGATAGGGTGGACGAACTGGCTGGCGCACT
TTACAGGTACCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTTTCCTCCTCCCTTTCTTCTTTTTTTTCTTCCGTCGTTTTTCTCC
GTCTCGCCTCTTTCATATTTAGACGCTCTCTAATTTTCCTCCTTCCCGTC
CTTCCTCTCTCCCTGCGGGACCCAGATATGTCTACCTCCGTGACGAGCAC
CTGAACGAAGATCACGTACTGGAGCTAGCAAGGTACCTCCCTCCCTCTCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCGCGCCTTCAGCCCCAGCTTGGTTCGTGTTTTTCCCTGA
CTGAAACCCCGACACCTCCCTCCCTTCTCCCTCCCTCTCTCTCTCTCCCT
CCCTCAGGTATGTGCAGCGCGAGCTTGACTCCCTCATGATGCTGCCGAAA
GAAGCGATATTTGAATCGCGGTTTAAATGGGGTCCTCTCCCATCATGGGG
AGGGAGGGCGGGAGGGAGGGGTGGAGGAAGGGTAGCGCCCCGGTACGTGA
GATCAGACGGGAAGGCAGTACCGGACGAGGAGGAGGAGGAGGAGGAAGGG
GAGGAGGAGGTGGAGAAGGAGGAAGGCAAGACACAGGCGGAGGAGGAGGA
GGACAAGAGGGGGGAATGGCGGACGGCCTTCTCGGAACAGGGTCGAATGT
ATTATTGGAATGTCCGAACGCGGGAATCGACGTACGAGAAGCCCTACTAG
CTTCCTTGCCTGCCCAACCTCCTTCCCTCCCTCCTTCCCTCCCTCCCTCC
CTCGTATGTGAAGATTGTTAGAAACAGGGAGGGGACTTAATGAGGCTCTT
TCCCTC back to topCoding sequence (CDS) from alignment at scaffold_42:140166..142321- >mRNA_10041 ID=mRNA_10041|Name=jgi.p|Nanoce1779_2|674394|organism=Nannochloropsis oceanica|type=CDS|length=6462bp|location=Sequence derived from alignment at scaffold_42:140166..142321- (Nannochloropsis oceanica) GTATGTGCAGCGCGAGCTTGACTCCCTCATGATGCTGCCGAAAGAAGCGA TATTTGAATCGCGGTTTAAATGGGGTCCTCTCCCATCATGGGGAGGGAGG GCGGGAGGGAGGGGTGGAGGAAGGGTAGCGCCCCGGTACGTGAGATCAGA CGGGAAGGCAGTACCGGACGAGGAGGAGGAGGAGGAGGAAGGGGAGGAGG AGGTGGAGAAGGAGGAAGGCAAGACACAGGCGGAGGAGGAGGAGGACAAG AGGGGGGAATGGCGGACGGCCTTCTCGGAACAGGGTCGAATGTATTATTG GAATGTCCGAACGCGGGAATCGACGTACGAGAAGCCCTACTAGATATGTC TACCTCCGTGACGAGCACCTGAACGAAGATCACGTACTGGAGCTAGCAAG GGACGAGACCACCGCCCGCATTCGTGCTCTGAAGGTCAACGAACTCTCCG TAAATAGCTATGTAAAAGAGGTGCAATCTTATTCATTCGGTGCCTGTGTG TCCTACGACGCTGCTCAAGCCCTCGAGACGGAGGAAGATAGGGTGGACGA ACTGGCTGGCGCACTTTACAGCCGGTCGCATCTCTGACTCTTTCCGGGCG GCTCACGGGCTGTTGGTAGTCCACGTGTGGATGCTGCACAAGCGCTTACT GCGAGAAGGGGAAGAAGGGAAGGTCTTGGAAGAGGCGCTCTTCGACCGGT TGTGGTCCGCGCGACTGCCCGTCCCACCTCTTTGACGCAACGTATCCTCC ATATATTCGGCATGGGCGAGTCGTTGAAGCGCACAAAGAACTCAGAAGCT CTCCTGCAAGCGTGCATCAGCCAGGCAAGCAACACAACTTTTTATCGAGA TGTACCCGGCTACCACCACCTCTCTCCGAGCGCTCCGTGGGGCCCGCCGC CTCGTCCATTTGCGTCCCTTGGCCTTGATCTCTACCACTTTCATAAACAC CCACCGGCCTGTCTATCTCCGCCAGTCAGGAGCTTTGACGGCGGCGGCCC CTTCCTCCTTCTCGACCTCCTCCACCTCTGCGGCTAACCCCCCTGCTAAC TCTGGGCGTACTGATGATGAGCCGCAGGTATGTGCAGCGCGAGCTTGACT CCCTCATGATGCTGCCGAAAGAAGCGATATTTGAATCGCGGTTTAAATGG GGTCCTCTCCCATCATGGGGAGGGAGGGCGGGAGGGAGGGGTGGAGGAAG GGTAGCGCCCCGGTACGTGAGATCAGACGGGAAGGCAGTACCGGACGAGG AGGAGGAGGAGGAGGAAGGGGAGGAGGAGGTGGAGAAGGAGGAAGGCAAG ACACAGGCGGAGGAGGAGGAGGACAAGAGGGGGGAATGGCGGACGGCCTT CTCGGAACAGGGTCGAATGTATTATTGGAATGTCCGAACGCGGGAATCGA CGTACGAGAAGCCCTACTAGATATGTCTACCTCCGTGACGAGCACCTGAA CGAAGATCACGTACTGGAGCTAGCAAGGGACGAGACCACCGCCCGCATTC GTGCTCTGAAGGTCAACGAACTCTCCGTAAATAGCTATGTAAAAGAGGTG CAATCTTATTCATTCGGTGCCTGTGTGTCCTACGACGCTGCTCAAGCCCT CGAGACGGAGGAAGATAGGGTGGACGAACTGGCTGGCGCACTTTACAGCC GGTCGCATCTCTGACTCTTTCCGGGCGGCTCACGGGCTGTTGGTAGTCCA CGTGTGGATGCTGCACAAGCGCTTACTGCGAGAAGGGGAAGAAGGGAAGG TCTTGGAAGAGGCGCTCTTCGACCGGTTGTGGTCCGCGCGACTGCCCGTC CCACCTCTTTGACGCAACGTATCCTCCATATATTCGGCATGGGCGAGTCG TTGAAGCGCACAAAGAACTCAGAAGCTCTCCTGCAAGCGTGCATCAGCCA GGCAAGCAACACAACTTTTTATCGAGATGTACCCGGCTACCACCACCTCT CTCCGAGCGCTCCGTGGGGCCCGCCGCCTCGTCCATTTGCGTCCCTTGGC CTTGATCTCTACCACTTTCATAAACACCCACCGGCCTGTCTATCTCCGCC AGTCAGGAGCTTTGACGGCGGCGGCCCCTTCCTCCTTCTCGACCTCCTCC ACCTCTGCGGCTAACCCCCCTGCTAACTCTGGGCGTACTGATGATGAGCC GCAGGTATGTGCAGCGCGAGCTTGACTCCCTCATGATGCTGCCGAAAGAA GCGATATTTGAATCGCGGTTTAAATGGGGTCCTCTCCCATCATGGGGAGG GAGGGCGGGAGGGAGGGGTGGAGGAAGGGTAGCGCCCCGGTACGTGAGAT CAGACGGGAAGGCAGTACCGGACGAGGAGGAGGAGGAGGAGGAAGGGGAG GAGGAGGTGGAGAAGGAGGAAGGCAAGACACAGGCGGAGGAGGAGGAGGA CAAGAGGGGGGAATGGCGGACGGCCTTCTCGGAACAGGGTCGAATGTATT ATTGGAATGTCCGAACGCGGGAATCGACGTACGAGAAGCCCTACTAGATA TGTCTACCTCCGTGACGAGCACCTGAACGAAGATCACGTACTGGAGCTAG CAAGGGACGAGACCACCGCCCGCATTCGTGCTCTGAAGGTCAACGAACTC TCCGTAAATAGCTATGTAAAAGAGGTGCAATCTTATTCATTCGGTGCCTG TGTGTCCTACGACGCTGCTCAAGCCCTCGAGACGGAGGAAGATAGGGTGG ACGAACTGGCTGGCGCACTTTACAGCCGGTCGCATCTCTGACTCTTTCCG GGCGGCTCACGGGCTGTTGGTAGTCCACGTGTGGATGCTGCACAAGCGCT TACTGCGAGAAGGGGAAGAAGGGAAGGTCTTGGAAGAGGCGCTCTTCGAC CGGTTGTGGTCCGCGCGACTGCCCGTCCCACCTCTTTGACGCAACGTATC CTCCATATATTCGGCATGGGCGAGTCGTTGAAGCGCACAAAGAACTCAGA AGCTCTCCTGCAAGCGTGCATCAGCCAGGCAAGCAACACAACTTTTTATC GAGATGTACCCGGCTACCACCACCTCTCTCCGAGCGCTCCGTGGGGCCCG CCGCCTCGTCCATTTGCGTCCCTTGGCCTTGATCTCTACCACTTTCATAA ACACCCACCGGCCTGTCTATCTCCGCCAGTCAGGAGCTTTGACGGCGGCG GCCCCTTCCTCCTTCTCGACCTCCTCCACCTCTGCGGCTAACCCCCCTGC TAACTCTGGGCGTACTGATGATGAGCCGCAGGTATGTGCAGCGCGAGCTT GACTCCCTCATGATGCTGCCGAAAGAAGCGATATTTGAATCGCGGTTTAA ATGGGGTCCTCTCCCATCATGGGGAGGGAGGGCGGGAGGGAGGGGTGGAG GAAGGGTAGCGCCCCGGTACGTGAGATCAGACGGGAAGGCAGTACCGGAC GAGGAGGAGGAGGAGGAGGAAGGGGAGGAGGAGGTGGAGAAGGAGGAAGG CAAGACACAGGCGGAGGAGGAGGAGGACAAGAGGGGGGAATGGCGGACGG CCTTCTCGGAACAGGGTCGAATGTATTATTGGAATGTCCGAACGCGGGAA TCGACGTACGAGAAGCCCTACTAGATATGTCTACCTCCGTGACGAGCACC TGAACGAAGATCACGTACTGGAGCTAGCAAGGGACGAGACCACCGCCCGC ATTCGTGCTCTGAAGGTCAACGAACTCTCCGTAAATAGCTATGTAAAAGA GGTGCAATCTTATTCATTCGGTGCCTGTGTGTCCTACGACGCTGCTCAAG CCCTCGAGACGGAGGAAGATAGGGTGGACGAACTGGCTGGCGCACTTTAC AGCCGGTCGCATCTCTGACTCTTTCCGGGCGGCTCACGGGCTGTTGGTAG TCCACGTGTGGATGCTGCACAAGCGCTTACTGCGAGAAGGGGAAGAAGGG AAGGTCTTGGAAGAGGCGCTCTTCGACCGGTTGTGGTCCGCGCGACTGCC CGTCCCACCTCTTTGACGCAACGTATCCTCCATATATTCGGCATGGGCGA GTCGTTGAAGCGCACAAAGAACTCAGAAGCTCTCCTGCAAGCGTGCATCA GCCAGGCAAGCAACACAACTTTTTATCGAGATGTACCCGGCTACCACCAC CTCTCTCCGAGCGCTCCGTGGGGCCCGCCGCCTCGTCCATTTGCGTCCCT TGGCCTTGATCTCTACCACTTTCATAAACACCCACCGGCCTGTCTATCTC CGCCAGTCAGGAGCTTTGACGGCGGCGGCCCCTTCCTCCTTCTCGACCTC CTCCACCTCTGCGGCTAACCCCCCTGCTAACTCTGGGCGTACTGATGATG AGCCGCAGGTATGTGCAGCGCGAGCTTGACTCCCTCATGATGCTGCCGAA AGAAGCGATATTTGAATCGCGGTTTAAATGGGGTCCTCTCCCATCATGGG GAGGGAGGGCGGGAGGGAGGGGTGGAGGAAGGGTAGCGCCCCGGTACGTG AGATCAGACGGGAAGGCAGTACCGGACGAGGAGGAGGAGGAGGAGGAAGG GGAGGAGGAGGTGGAGAAGGAGGAAGGCAAGACACAGGCGGAGGAGGAGG AGGACAAGAGGGGGGAATGGCGGACGGCCTTCTCGGAACAGGGTCGAATG TATTATTGGAATGTCCGAACGCGGGAATCGACGTACGAGAAGCCCTACTA GATATGTCTACCTCCGTGACGAGCACCTGAACGAAGATCACGTACTGGAG CTAGCAAGGGACGAGACCACCGCCCGCATTCGTGCTCTGAAGGTCAACGA ACTCTCCGTAAATAGCTATGTAAAAGAGGTGCAATCTTATTCATTCGGTG CCTGTGTGTCCTACGACGCTGCTCAAGCCCTCGAGACGGAGGAAGATAGG GTGGACGAACTGGCTGGCGCACTTTACAGCCGGTCGCATCTCTGACTCTT TCCGGGCGGCTCACGGGCTGTTGGTAGTCCACGTGTGGATGCTGCACAAG CGCTTACTGCGAGAAGGGGAAGAAGGGAAGGTCTTGGAAGAGGCGCTCTT CGACCGGTTGTGGTCCGCGCGACTGCCCGTCCCACCTCTTTGACGCAACG TATCCTCCATATATTCGGCATGGGCGAGTCGTTGAAGCGCACAAAGAACT CAGAAGCTCTCCTGCAAGCGTGCATCAGCCAGGCAAGCAACACAACTTTT TATCGAGATGTACCCGGCTACCACCACCTCTCTCCGAGCGCTCCGTGGGG CCCGCCGCCTCGTCCATTTGCGTCCCTTGGCCTTGATCTCTACCACTTTC ATAAACACCCACCGGCCTGTCTATCTCCGCCAGTCAGGAGCTTTGACGGC GGCGGCCCCTTCCTCCTTCTCGACCTCCTCCACCTCTGCGGCTAACCCCC CTGCTAACTCTGGGCGTACTGATGATGAGCCGCAGGTATGTGCAGCGCGA GCTTGACTCCCTCATGATGCTGCCGAAAGAAGCGATATTTGAATCGCGGT TTAAATGGGGTCCTCTCCCATCATGGGGAGGGAGGGCGGGAGGGAGGGGT GGAGGAAGGGTAGCGCCCCGGTACGTGAGATCAGACGGGAAGGCAGTACC GGACGAGGAGGAGGAGGAGGAGGAAGGGGAGGAGGAGGTGGAGAAGGAGG AAGGCAAGACACAGGCGGAGGAGGAGGAGGACAAGAGGGGGGAATGGCGG ACGGCCTTCTCGGAACAGGGTCGAATGTATTATTGGAATGTCCGAACGCG GGAATCGACGTACGAGAAGCCCTACTAGATATGTCTACCTCCGTGACGAG CACCTGAACGAAGATCACGTACTGGAGCTAGCAAGGGACGAGACCACCGC CCGCATTCGTGCTCTGAAGGTCAACGAACTCTCCGTAAATAGCTATGTAA AAGAGGTGCAATCTTATTCATTCGGTGCCTGTGTGTCCTACGACGCTGCT CAAGCCCTCGAGACGGAGGAAGATAGGGTGGACGAACTGGCTGGCGCACT TTACAGCCGGTCGCATCTCTGACTCTTTCCGGGCGGCTCACGGGCTGTTG GTAGTCCACGTGTGGATGCTGCACAAGCGCTTACTGCGAGAAGGGGAAGA AGGGAAGGTCTTGGAAGAGGCGCTCTTCGACCGGTTGTGGTCCGCGCGAC TGCCCGTCCCACCTCTTTGACGCAACGTATCCTCCATATATTCGGCATGG GCGAGTCGTTGAAGCGCACAAAGAACTCAGAAGCTCTCCTGCAAGCGTGC ATCAGCCAGGCAAGCAACACAACTTTTTATCGAGATGTACCCGGCTACCA CCACCTCTCTCCGAGCGCTCCGTGGGGCCCGCCGCCTCGTCCATTTGCGT CCCTTGGCCTTGATCTCTACCACTTTCATAAACACCCACCGGCCTGTCTA TCTCCGCCAGTCAGGAGCTTTGACGGCGGCGGCCCCTTCCTCCTTCTCGA CCTCCTCCACCTCTGCGGCTAACCCCCCTGCTAACTCTGGGCGTACTGAT GATGAGCCGCAG back to top
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