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Properties
Property Name | Value |
TranscriptId | 612158 |
Track | FilteredModels2 |
ProteinId | 612072 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_61 | supercontig | scaffold_61:59973..63297 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10660 ID=mRNA_10660|Name=jgi.p|Nanoce1779_2|612072|organism=Nannochloropsis oceanica|type=mRNA|length=1679bp TCGCCAAAGCCGCCGCAGGGGCAGCAAGCACGGAGGTCGCCTTTTCGTTT TCCATCTCGTCGTCCTCCTCCTCCTCCTCCTCGTCCTCGCTCGAGCTCCC CTCTTTCGTGGACAGAGCGCGCCGCATGTAGGCCATGTGCTCGTCCACCT CCTCCTTGCTCTTCAGGACGCTAGGGGTAGGCACGCGGGCGGCTATGGGG GGAGGGCGCTGGTTGAATTCGTCCCCACCCAGGTCATCTGACAGGGCCTC GTCGTCGTCGGGGCTCACGGGGCCCGGCATCATGCCGTCCTGCGAGCACT CCAGGTGGGGCATGGCCAAGCACACCGACGACGACGTCCGCTTTATGATA GCCGCGCTGCTGCTCGGGGTCATGGGAAAAACAAGCTGCCCTTGGCTCGT GTGCGGTTGCAGCTGCGGCAACTGCTGCTGCTGTCGTCGTTGCTGGCGTT GGGAGGGGGTGGTGCGCAATTGAACTACAACGGGCTCTCCGTCCGGGCCA GGCGGGACGGGCGGGTAATGGGAGTGACTGGCAGTGGCGATGCTACGGGT GGGTGTCTTGCCCTTGAGGCTGGCCTTGAGCCGAGCCGCGAAAGTCGAGG AGGAATTGGAGCTGAATCGCTCGGGATCTTCGGCCATATGCGCTGCCGGG GACTCCCTCTCCGTGTCCGAGTCGAGGCTATTGAGGCTCTTGCTGGAGAG GACGGGAGGGAGGTTGCTAGGACGTGCTCGGTGCCGCCGCGAGGGCAGCT TCAGCTTCTCCCCGACAGCAACCCCCTTCTCCGCGCCCTCGCCGGTCTCG GTGGGCGAATGGGCCGACTCCAGATGCGCTTCCGGGAAGAAGCCGCGGGA CAGCAGGGACTGCATCGTGCCTTCCCCTCGGATCTTGCCGCGTTTAATGA CGAGGACTTTGGGCACCTCCTCCTCCTCGAGCAAGTACTGCAGCTGATGG GTGGCCAGGATGCGGGTGCTGCCCTTCAGGAGGCCGCAAATGAGGCGGTC AAACACTCGACGGCCGACCTTGGGATCGAGGGCGGAGAGGGCGTCATCGA TGAGGTAAAGCGAGGCATCCCCGTAGGCCATGCGGGCCAGACCGATGCGC GCCCGCTGGCCGCCCGACATGTTCACCCCCCTGTCACCGATGACGGTATG GTCACCATGCTCCCACTCCTTGAGGTCGGTCTTGAGGCACGCGGCCTTTA AGACGGCGATGTATTTCTCGTGGACGTAGGGACGACCCATCAAAATATTG TCGCGGACAGATCCCGTCAGGATCCACGGCTCTTGCGCGGCATAAGCCAA GGGTCCGGTGCCGATGTTGATGATATTCATGTCGTTCACACCCAGCTCGC CCAACATGGCCAGGAGGAGGGTGCTCTTGCCTGGGGGGAGGGAGGGAAAA AGGGAGGATGAGGAGAAGGGAGAGGGAGGAGGAAACGAGGAAGAGGGAGG GCTTGAAGGACGCACCACTTCCGACGGGCCCGGCCAGACCTGTGATCTTG CCCTGGCAGGCGACGAAAGAAATCTGGGAACGAGTGCAGAAGTAACATGT GAGTATTACATACACGCTTTCTCCTTCCCTCCCCCTTTCCCTCCTTCCTT CCTTCCCTTGAGAACTTATCCCCCCTCCCTCTTTTTTCCCTCTTTTTTTC CCCCTCTTTTTTCCCTCTTTTGTTCCTCC back to topprotein sequence of jgi.p|Nanoce1779_2|612072 >mRNA_10660-protein ID=mRNA_10660-protein|Name=jgi.p|Nanoce1779_2|612072|organism=Nannochloropsis oceanica|type=polypeptide|length=228bp MGVTGSGDATGGCLALEAGLEPSRESRGGIGAESLGIFGHMRCRGLPLRV RVEAIEALAGEDGREVARTCSVPPRGQLQLLPDSNPLLRALAGLGGRMGR LQMRFREEAAGQQGLHRAFPSDLAAFNDEDFGHLLLLEQVLQLMGGQDAG AALQEAANEAVKHSTADLGIEGGEGVIDEVKRGIPVGHAGQTDARPLAAR HVHPPVTDDGMVTMLPLLEVGLEARGL* back to topmRNA from alignment at scaffold_61:59973..63297- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10660 ID=mRNA_10660|Name=jgi.p|Nanoce1779_2|612072|organism=Nannochloropsis oceanica|type=mRNA|length=3325bp|location=Sequence derived from alignment at scaffold_61:59973..63297- (Nannochloropsis oceanica) TCGCCAAAGCCGCCGCAGGGGCAGCAAGCACGGAGGTCGCCTTTTCGTTT
TCCATCTCGTCGTCCTCCTCCTCCTCCTCCTCGTCCTGCACAGAATACAC
GGGAAATGAGTGAGAAGACGTTCAGCATCCATCCCACCGCTTTCCCTATC
CTCTTCTTTTTTTTTCTTTTTTTTTCTTTTTTTTCCTCCCTCCCACCGTA
CCTCGCTCGAGCTCCCCTCTTTCGTGGACAGAGCGCGCCGCATGTAGGCC
ATGTGCTCGTCCACCTCCTCCTTGCTCTTCAGGACGCTAGGGGTAGGCAC
GCGGGCGGCTATGGGGGGAGGGCGCTGGTTGAATTCGTCCCCACCCAGGT
CATCTGACAGGGCCTCGTCGTCGTCGGGGCTCCTGCGAGAAGGAGGAAAG
GAGGGAGGGAGAAAGGGAGGGAGGATGGGAACCGTCAAAACCTCAATGAA
AGTACACATCACCTTCATGCACGACCAAAACTAGAAGTAGAAGCGGGTCG
TGAGGCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTC
CCGGCTTACACGGGGCCCGGCATCATGCCGTCCTGCGAGCACTCCAGGTG
GGGCATGGCCAAGCACACCGACGACGACGTCCGCTTTATGATAGCCGCGC
TGCTGCTCGGGGTCATGGGAAAAACAAGCTGCCCTTGGCTCGTGTGCGGT
TGCAGCTGCGGCAACTGCTGCTGCTGTCGTCGTTGCTGGCGTTGGGAGGG
GGTGGTGCGCAATTGCTAGAGAGGCGGGAAGGGGGGTGGGAAGAGGACGG
TGAGGGGATTGTGCTCGGGAAGGCAGGGAGGAGGGTCGGGGGACACGCGG
GCAAGGGAGAGCACGACTGAATGGAAATAGTGCAGTGAGAAGGCGCGCAG
AGAGGGGAGGGACGGAGGGAGGGAGGGACGGAGGGAGGGACGGAGGGAGG
GCGAGATGGTCGGCACTCACAACTACAACGGGCTCTCCGTCCGGGCCAGG
CGGGACGGGCGGGTAATGGGAGTGACTGGCAGTGGCGATGCTACGGGTGG
GTGTCTTGCCCTTGAGGCTGGCCTTGAGCCGAGCCGCGAAAGTCGAGGAG
GAATTGGAGCTGAATCGCTCGGGATCTGGGCGGGGAGGTTTGAGGTAAAT
GGATGAATGGATAGGGCCTGGGGTTGGATGGACGTCTGTCGGGCCGCGGG
GGAGGGTTTCCTGAAAAGACGCGCAAGGGTTGTTCTCTCAATCTCTCTCA
TGGTATTTCTCTCAATCTCTCTCTCGGTATTTCTCTCACCTTCCAACTCC
CTCTCTCTCTCTCTCTCTCGTGTTCCCTCTCTGCCTCTTCTTGCTTCTCC
CTCTTGTTCTCGCTCCCCCATCCCACCCTTCAGTCCATCCCTGTCTCTCG
CTCCTCACCTTCGGCCATATGCGCTGCCGGGGACTCCCTCTCCGTGTCCG
AGTCGAGGCTATTGAGGCTCTTGCTGGAGAGGACGGGAGGGAGGTTGCTA
GGACGTGCTCGGTGCCGCCGCGAGGGCAGCTTCAGCTTCTCCCCGACAGC
AACCTGTGAGATATACACACGGAGACGAAGATGGGCAAGCGTCCCGAGGG
GGTCGAGGGAGCACAAAAGGGCAAGGGAAAATGATGCCATGGCCTGTGGC
TCCTGGTCATCCTTTCCTCCTTTCCTCCTTCCCTCCTTCCCTCCTTCCCT
GCCCTCTCCCTCCTCCCTTCCTTACCCCCTTCTCCGCGCCCTCGCCGGTC
TCGGTGGGCGAATGGGCCGACTCCAGATGCGCTTCCGGGAAGAAGCCGCG
GGACTGCGGGGAGGGAGGGAGGTTAAGAAGAGAAGAAGGGAAGGAGGGAG
GGAGGGTCAGAAGAGAGGAAGGAAGGGGTGAGGGGGGGAGGGAGGGAGCA
AGGGAAGGAGGGAGCAAGGGAGGGTGGGGAAAGGTCGTGGGCCGTACCAG
CAGGGACTGCATCGTGCCTTCCCCTCGGATCTTGCCGCGTTTAATGACGA
GGACTTTGGGCACCTCCTCCTCCTCCTGTACACAGCGACAAGAGGTAGAG
GGTGAGAAAATGTGTGTGTACACACATTACACGTAAAAACAATTATGTCT
GCTCGCCTTTCGCCTTTCTCCCGCCCTCCCTCCCTCCCTCCCTCCCTTCC
TCCCTTTCTTCGCCATTCCCAACTCACGAGCAAGTACTGCAGCTGATGGG
TGGCCAGGATGCGGGTGCTGCCCTTCAGGAGGCCGCAAATGAGGCGGTCA
AACACTCGACGGCCGACCTGGTAAAGCCGAGAGGAGGTGGGGGTTGCTTG
AGGCCTTGAAGGAGGGAGGGCGGGAGAGAGGGAGGGAAGGAGGGAGGGAG
GGGCGTACCTTGGGATCGAGGGCGGAGAGGGCGTCATCGATGAGGTAAAG
CGAGGCATCCCCGTAGGCCATGCGGGCCAGACCGATGCGCGCCCGCTGGC
CGCCCGACATGTTCACCTGCGCACAGAGAAGGAGGGGGGGACGGAGGGAG
GGTTGGAAGGAGGGTGGGAAGGGGCAAGGGGGGAGGGCGGGCACTTACCC
CCCTGTCACCGATGACGGTATGGTCACCATGCTCCCACTCCTTGAGGTCG
GTCTTGAGGCACGCGGCCTTTAAGACGGCGATGTATCTGGGGAGAGGGGG
AGGACGAGAGGCGCCAAGACAAGGTTAGATAAGACCTACATCCTTCGCTC
CCTCCCTCCTGCCGGCCAGCCCGCCCTCCCTCCGTACGTACTTCTCGTGG
ACGTAGGGACGACCCATCAAAATATTGTCGCGGACAGATCCCGTCAGGAT
CCACGGCTAGGCAGGGGGAAGAGGGAGGAAGGGAGAAGAGGAAGGGAGGA
GGGATGGTCAGCTCACTTGTCCATCGAGTTCCGGGTTTGTCCCCGCCCTC
CCTCCTCCCCGCCCTCCCTCCGCACCTCTTGCGCGGCATAAGCCAAGGGT
CCGGTGCCGATGTTGATGATATTCATGTCGTTCACACCCAGCTCGCCCAA
CATGGCCAGGAGGAGGGTGCTCTTGCCTGGGGGGAGGGAGGGAAAAAGGG
AGGATGAGGAGAAGGGAGAGGGAGGAGGAAACGAGGAAGAGGGAGGGCTT
GAAGGACGCACCACTTCCGACGGGCCCGGCCAGACCTGTGATCTTGCCCT
GGCAGGCGACGAAAGAAATCTGGGAACGAGTGCAGAAGTAACATGTGAGT
ATTACATACACGCTTTCTCCTTCCCTCCCCCTTTCCCTCCTTCCTTCCTT
CCCTTGAGAACTTATCCCCCCTCCCTCTTTTTTCCCTCTTTTTTTCCCCC
TCTTTTTTCCCTCTTTTGTTCCTCC back to topCoding sequence (CDS) from alignment at scaffold_61:59973..63297- >mRNA_10660 ID=mRNA_10660|Name=jgi.p|Nanoce1779_2|612072|organism=Nannochloropsis oceanica|type=CDS|length=4788bp|location=Sequence derived from alignment at scaffold_61:59973..63297- (Nannochloropsis oceanica) CCCCCTGTCACCGATGACGGTATGGTCACCATGCTCCCACTCCTTGAGGT CGGTCTTGAGGCACGCGGCCTTTAACTTGGGATCGAGGGCGGAGAGGGCG TCATCGATGAGGTAAAGCGAGGCATCCCCGTAGGCCATGCGGGCCAGACC GATGCGCGCCCGCTGGCCGCCCGACATGTTCACGAGCAAGTACTGCAGCT GATGGGTGGCCAGGATGCGGGTGCTGCCCTTCAGGAGGCCGCAAATGAGG CGGTCAAACACTCGACGGCCGACCAGCAGGGACTGCATCGTGCCTTCCCC TCGGATCTTGCCGCGTTTAATGACGAGGACTTTGGGCACCTCCTCCTCCT CCCCCTTCTCCGCGCCCTCGCCGGTCTCGGTGGGCGAATGGGCCGACTCC AGATGCGCTTCCGGGAAGAAGCCGCGGGACTTCGGCCATATGCGCTGCCG GGGACTCCCTCTCCGTGTCCGAGTCGAGGCTATTGAGGCTCTTGCTGGAG AGGACGGGAGGGAGGTTGCTAGGACGTGCTCGGTGCCGCCGCGAGGGCAG CTTCAGCTTCTCCCCGACAGCAACATGGGAGTGACTGGCAGTGGCGATGC TACGGGTGGGTGTCTTGCCCTTGAGGCTGGCCTTGAGCCGAGCCGCGAAA GTCGAGGAGGAATTGGAGCTGAATCGCTCGGGATCCCCCTGTCACCGATG ACGGTATGGTCACCATGCTCCCACTCCTTGAGGTCGGTCTTGAGGCACGC GGCCTTTAACTTGGGATCGAGGGCGGAGAGGGCGTCATCGATGAGGTAAA GCGAGGCATCCCCGTAGGCCATGCGGGCCAGACCGATGCGCGCCCGCTGG CCGCCCGACATGTTCACGAGCAAGTACTGCAGCTGATGGGTGGCCAGGAT GCGGGTGCTGCCCTTCAGGAGGCCGCAAATGAGGCGGTCAAACACTCGAC GGCCGACCAGCAGGGACTGCATCGTGCCTTCCCCTCGGATCTTGCCGCGT TTAATGACGAGGACTTTGGGCACCTCCTCCTCCTCCCCCTTCTCCGCGCC CTCGCCGGTCTCGGTGGGCGAATGGGCCGACTCCAGATGCGCTTCCGGGA AGAAGCCGCGGGACTTCGGCCATATGCGCTGCCGGGGACTCCCTCTCCGT GTCCGAGTCGAGGCTATTGAGGCTCTTGCTGGAGAGGACGGGAGGGAGGT TGCTAGGACGTGCTCGGTGCCGCCGCGAGGGCAGCTTCAGCTTCTCCCCG ACAGCAACATGGGAGTGACTGGCAGTGGCGATGCTACGGGTGGGTGTCTT GCCCTTGAGGCTGGCCTTGAGCCGAGCCGCGAAAGTCGAGGAGGAATTGG AGCTGAATCGCTCGGGATCCCCCTGTCACCGATGACGGTATGGTCACCAT GCTCCCACTCCTTGAGGTCGGTCTTGAGGCACGCGGCCTTTAACTTGGGA TCGAGGGCGGAGAGGGCGTCATCGATGAGGTAAAGCGAGGCATCCCCGTA GGCCATGCGGGCCAGACCGATGCGCGCCCGCTGGCCGCCCGACATGTTCA CGAGCAAGTACTGCAGCTGATGGGTGGCCAGGATGCGGGTGCTGCCCTTC AGGAGGCCGCAAATGAGGCGGTCAAACACTCGACGGCCGACCAGCAGGGA CTGCATCGTGCCTTCCCCTCGGATCTTGCCGCGTTTAATGACGAGGACTT TGGGCACCTCCTCCTCCTCCCCCTTCTCCGCGCCCTCGCCGGTCTCGGTG GGCGAATGGGCCGACTCCAGATGCGCTTCCGGGAAGAAGCCGCGGGACTT CGGCCATATGCGCTGCCGGGGACTCCCTCTCCGTGTCCGAGTCGAGGCTA TTGAGGCTCTTGCTGGAGAGGACGGGAGGGAGGTTGCTAGGACGTGCTCG GTGCCGCCGCGAGGGCAGCTTCAGCTTCTCCCCGACAGCAACATGGGAGT GACTGGCAGTGGCGATGCTACGGGTGGGTGTCTTGCCCTTGAGGCTGGCC TTGAGCCGAGCCGCGAAAGTCGAGGAGGAATTGGAGCTGAATCGCTCGGG ATCCCCCTGTCACCGATGACGGTATGGTCACCATGCTCCCACTCCTTGAG GTCGGTCTTGAGGCACGCGGCCTTTAACTTGGGATCGAGGGCGGAGAGGG CGTCATCGATGAGGTAAAGCGAGGCATCCCCGTAGGCCATGCGGGCCAGA CCGATGCGCGCCCGCTGGCCGCCCGACATGTTCACGAGCAAGTACTGCAG CTGATGGGTGGCCAGGATGCGGGTGCTGCCCTTCAGGAGGCCGCAAATGA GGCGGTCAAACACTCGACGGCCGACCAGCAGGGACTGCATCGTGCCTTCC CCTCGGATCTTGCCGCGTTTAATGACGAGGACTTTGGGCACCTCCTCCTC CTCCCCCTTCTCCGCGCCCTCGCCGGTCTCGGTGGGCGAATGGGCCGACT CCAGATGCGCTTCCGGGAAGAAGCCGCGGGACTTCGGCCATATGCGCTGC CGGGGACTCCCTCTCCGTGTCCGAGTCGAGGCTATTGAGGCTCTTGCTGG AGAGGACGGGAGGGAGGTTGCTAGGACGTGCTCGGTGCCGCCGCGAGGGC AGCTTCAGCTTCTCCCCGACAGCAACATGGGAGTGACTGGCAGTGGCGAT GCTACGGGTGGGTGTCTTGCCCTTGAGGCTGGCCTTGAGCCGAGCCGCGA AAGTCGAGGAGGAATTGGAGCTGAATCGCTCGGGATCCCCCTGTCACCGA TGACGGTATGGTCACCATGCTCCCACTCCTTGAGGTCGGTCTTGAGGCAC GCGGCCTTTAACTTGGGATCGAGGGCGGAGAGGGCGTCATCGATGAGGTA AAGCGAGGCATCCCCGTAGGCCATGCGGGCCAGACCGATGCGCGCCCGCT GGCCGCCCGACATGTTCACGAGCAAGTACTGCAGCTGATGGGTGGCCAGG ATGCGGGTGCTGCCCTTCAGGAGGCCGCAAATGAGGCGGTCAAACACTCG ACGGCCGACCAGCAGGGACTGCATCGTGCCTTCCCCTCGGATCTTGCCGC GTTTAATGACGAGGACTTTGGGCACCTCCTCCTCCTCCCCCTTCTCCGCG CCCTCGCCGGTCTCGGTGGGCGAATGGGCCGACTCCAGATGCGCTTCCGG GAAGAAGCCGCGGGACTTCGGCCATATGCGCTGCCGGGGACTCCCTCTCC GTGTCCGAGTCGAGGCTATTGAGGCTCTTGCTGGAGAGGACGGGAGGGAG GTTGCTAGGACGTGCTCGGTGCCGCCGCGAGGGCAGCTTCAGCTTCTCCC CGACAGCAACATGGGAGTGACTGGCAGTGGCGATGCTACGGGTGGGTGTC TTGCCCTTGAGGCTGGCCTTGAGCCGAGCCGCGAAAGTCGAGGAGGAATT GGAGCTGAATCGCTCGGGATCCCCCTGTCACCGATGACGGTATGGTCACC ATGCTCCCACTCCTTGAGGTCGGTCTTGAGGCACGCGGCCTTTAACTTGG GATCGAGGGCGGAGAGGGCGTCATCGATGAGGTAAAGCGAGGCATCCCCG TAGGCCATGCGGGCCAGACCGATGCGCGCCCGCTGGCCGCCCGACATGTT CACGAGCAAGTACTGCAGCTGATGGGTGGCCAGGATGCGGGTGCTGCCCT TCAGGAGGCCGCAAATGAGGCGGTCAAACACTCGACGGCCGACCAGCAGG GACTGCATCGTGCCTTCCCCTCGGATCTTGCCGCGTTTAATGACGAGGAC TTTGGGCACCTCCTCCTCCTCCCCCTTCTCCGCGCCCTCGCCGGTCTCGG TGGGCGAATGGGCCGACTCCAGATGCGCTTCCGGGAAGAAGCCGCGGGAC TTCGGCCATATGCGCTGCCGGGGACTCCCTCTCCGTGTCCGAGTCGAGGC TATTGAGGCTCTTGCTGGAGAGGACGGGAGGGAGGTTGCTAGGACGTGCT CGGTGCCGCCGCGAGGGCAGCTTCAGCTTCTCCCCGACAGCAACATGGGA GTGACTGGCAGTGGCGATGCTACGGGTGGGTGTCTTGCCCTTGAGGCTGG CCTTGAGCCGAGCCGCGAAAGTCGAGGAGGAATTGGAGCTGAATCGCTCG GGATCCCCCTGTCACCGATGACGGTATGGTCACCATGCTCCCACTCCTTG AGGTCGGTCTTGAGGCACGCGGCCTTTAACTTGGGATCGAGGGCGGAGAG GGCGTCATCGATGAGGTAAAGCGAGGCATCCCCGTAGGCCATGCGGGCCA GACCGATGCGCGCCCGCTGGCCGCCCGACATGTTCACGAGCAAGTACTGC AGCTGATGGGTGGCCAGGATGCGGGTGCTGCCCTTCAGGAGGCCGCAAAT GAGGCGGTCAAACACTCGACGGCCGACCAGCAGGGACTGCATCGTGCCTT CCCCTCGGATCTTGCCGCGTTTAATGACGAGGACTTTGGGCACCTCCTCC TCCTCCCCCTTCTCCGCGCCCTCGCCGGTCTCGGTGGGCGAATGGGCCGA CTCCAGATGCGCTTCCGGGAAGAAGCCGCGGGACTTCGGCCATATGCGCT GCCGGGGACTCCCTCTCCGTGTCCGAGTCGAGGCTATTGAGGCTCTTGCT GGAGAGGACGGGAGGGAGGTTGCTAGGACGTGCTCGGTGCCGCCGCGAGG GCAGCTTCAGCTTCTCCCCGACAGCAACATGGGAGTGACTGGCAGTGGCG ATGCTACGGGTGGGTGTCTTGCCCTTGAGGCTGGCCTTGAGCCGAGCCGC GAAAGTCGAGGAGGAATTGGAGCTGAATCGCTCGGGAT back to top
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